Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000086-TA|BGIBMGA000086-PA|IPR002589|Appr-1-p processing
(244 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.62
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 29 0.62
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 29 0.62
SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual 29 0.82
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 0.82
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 28 1.1
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 28 1.4
SPAC31G5.21 |||human family 32A homolog|Schizosaccharomyces pomb... 28 1.4
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 27 2.5
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 27 2.5
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 27 2.5
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 27 3.3
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 27 3.3
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 3.3
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 26 4.4
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 26 4.4
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 26 4.4
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 26 5.8
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 5.8
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 7.6
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 25 7.6
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.6
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 25 7.6
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 25 7.6
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 25 7.6
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 29.1 bits (62), Expect = 0.62
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 46 KSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGD 86
+ QGI S S DL E + +K E KS+ ++ F D
Sbjct: 177 QGQGISSVLSMVHDLSEVDSLKTRNEVKKSLQSFMNFFFSD 217
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 29.1 bits (62), Expect = 0.62
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 184 FPCISTGIYGFPNRLAAHIALRTARKFLETNTEMNRIIFCTFLPIDVEIYETL 236
F CIST + L + + L + + T MN + C LP+ V +Y TL
Sbjct: 135 FYCISTNV------LVSSLLLLGGSQGFSSTTGMNTVAACFLLPLGVMVYTTL 181
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 29.1 bits (62), Expect = 0.62
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 20 EEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEK 65
++K+K K ++D S K +G++S K+ DD+ E EK
Sbjct: 100 KKKKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKNIDDDIDEIEK 145
>SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 366
Score = 28.7 bits (61), Expect = 0.82
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 55 STTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGGGV 109
+T +KE E T+KNK+ ++ + + K + KL+ + + GGG+
Sbjct: 3 TTAQKIKEVEDEMAKTQKNKATAKHLGMLKAKLAKLKRELITPTGGG---GGGGL 54
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 28.7 bits (61), Expect = 0.82
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 8 EIEKNRILKLS-LEEKRKIYKSS--DFIDLENVDPWSKYLNKSQG---IDSKKSTTDDLK 61
EI +N +LK+S LE +K Y+ D L++VD + L+K + +
Sbjct: 1155 EIHENLLLKVSDLENYKKKYEGLQLDLEGLKDVDTNFQELSKKHRDLTFNHESLLRQSAS 1214
Query: 62 EFEKIKINTEKNKSISERVSIFKGDITKL 90
EK+ + + +NK +S +VS + +L
Sbjct: 1215 YKEKLSLASSENKDLSNKVSSLTKQVNEL 1243
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 37 VDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLE 91
+D S YL++ + ++S + ++ L + K ++ K KSIS+ K +I +LE
Sbjct: 220 IDSSSNYLSRIEMLESSLAKSNSLLDSSKSEMEALKAKSISDATK-HKNEIFQLE 273
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 12 NRILKLSLEEKRKIYKSSDF---IDLENVDPWSKYLNKSQGID 51
N+I++++L+ I K + +DLEN++ ++ Y+ ++ G+D
Sbjct: 433 NKIIQVALDAIENILKVGEMDRTMDLENINQYAVYVEEAGGMD 475
>SPAC31G5.21 |||human family 32A homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 118
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 3 NSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKE 62
N K ++K + L EK + + S D LE + + +S+ DS T+ K
Sbjct: 12 NVKKKPLKKKKKDSKKLAEKVQEHSSRDKSPLEENGVSTYQMLRSKDTDSAMPMTEAQKH 71
Query: 63 FEKIKINTEKNKSISERVSIFKGDI 87
FE ++ K+ +ER+ K I
Sbjct: 72 FESVQEQRLLQKAKNERLKTHKDRI 96
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 2 VNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLK 61
+ + K E E + +L + KRKI + + + N+D YL + ++ DD +
Sbjct: 16 IENQKLEEEWRKKRRLEKKRKRKILEEEEKAEERNIDACRLYLMGNTPELKSCNSIDDYE 75
Query: 62 EFEKIK 67
EKI+
Sbjct: 76 ILEKIE 81
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 44 LNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKG 85
+NK++ + + K+ T L+ + K N+ +N ++E + F G
Sbjct: 242 VNKARSVSNAKAPTSALRALLEHKENSSQNGPLAENFATFSG 283
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 44 LNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRL 103
L KS G K S K ++ + + E+N+ + V + + ITKLE + V ++
Sbjct: 355 LEKSIGDTLKSSIRSSPKSKKRSREDFEENEDYNAMVPVKRSRITKLESE--VYYEKRKV 412
Query: 104 KAGGGV 109
+A GG+
Sbjct: 413 RALGGI 418
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 IDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDIT 88
+++ TD+ K K++I + + +ISE++S FK +T
Sbjct: 245 VETANFLTDEEKTLAKMRIENDSSSAISEKLS-FKQSLT 282
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 32 IDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEK 65
ID E +DPW NK+ + + + D +++
Sbjct: 150 IDCETLDPWPSMQNKATSVTIRNTPASDFHVYKE 183
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 50 IDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKL 90
++S K ++L+E ++K+ E+N S+ +++S KG++ L
Sbjct: 652 LESLKRENEELRE--QLKVEHEENISMQKQLSELKGELNTL 690
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 29 SDFIDLENVDPWSKYLNKSQG 49
S F DLE+ D S+YLN++ G
Sbjct: 579 SGFDDLEDTDSTSQYLNENSG 599
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 58 DDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGG 107
+ ++E E T+KNK+ + + KG + KL + + S K G
Sbjct: 5 EKIQEIEAEMRRTQKNKATEYHLGLLKGKLAKLRAQLLEPTSKSGPKGEG 54
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 33 DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTE 71
D+ + S + K+ GIDSKKS T + E + I+ E
Sbjct: 875 DVSDTSDRSPFSFKAFGIDSKKSPTPEPTEMAESNISEE 913
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 14 ILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDS-KKSTTDDLKEFEKIKINTEK 72
I+K R + ++L + + L K Q S + DD++ FEK K ++
Sbjct: 17 IIKFDTNSSRYPFYKKHLLELNSESTFLGLLTKGQADTSITRLNQDDVRLFEKAKTVADR 76
Query: 73 NKSIS 77
K ++
Sbjct: 77 TKDVA 81
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 9 IEKNRILKLSLEEKRKIYKSSDFIDLENVDP----WSKYLNKSQ 48
++K +L+L +E +YK+ + + V+P W+ YL + Q
Sbjct: 335 LKKKYVLQLKRDELENVYKAWNIKHPQRVNPKLLRWTPYLGEEQ 378
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 30 DFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKN 73
D D NVD + + +D STT+ K EK+ N N
Sbjct: 169 DMNDKINVDEAAAKSDSKLNVDQINSTTESEKRVEKVNPNIANN 212
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.4 bits (53), Expect = 7.6
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 7 WEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDD--LKEFE 64
W I +NR+ + RK + L NV+ + KS I ST+D L E
Sbjct: 1314 WVIIRNRLTSIRFIVNRKFFVCFKDETLPNVEIEGCLIEKSNAILPHGSTSDKLFLLEIP 1373
Query: 65 KIKINTEK--NKSISERVSIFKGDITKLE-IDAVVNAANSRLKAGGGVDGAI 113
+ TEK I S+ T++E I+ ++ SR + V GA+
Sbjct: 1374 EKSYLTEKVSISMIFAHPSVSGIYETRIEPIERLILEMGSRKRFNNSVPGAL 1425
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 42 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAV 95
K++ + + I D K+ EKIK+ +KNK V++++ +I + DA+
Sbjct: 150 KHMREFEQIKKSAMRYDRQKQKEKIKMVEQKNKRNLYLVNVWEREILRNWPDAL 203
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 7.6
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 38 DPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVN 97
D W KY + + K ++ DL + + ++ SI+E ++ +I I ++
Sbjct: 9 DYWKKYFSNKKKPTVKNTSDIDLLHINRGRQPFDEGLSINEDSFFYRHNIHVPRIVYLII 68
Query: 98 AANSRLKAGGGVDGAIHRAAGPFLQAECD----SIGGCPTGDAKVTGGYNLPAKYIIHTV 153
A GG++ AI A G + + E + +GDA VT Y + ++
Sbjct: 69 VACGSFIITGGIEFAI--AYGMYKKTETSVRLWRLPDTLSGDAAVTNFVQAIVTYWVESI 126
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 5 TKWEIEKNRILKLSLEEKRKIYKSSDFID 33
+KW E R L+L EE R++ S F D
Sbjct: 449 SKWVGEAERQLRLLFEEARRVQPSIIFFD 477
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 10 EKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKS 47
+K LK SL+E+ YKSS ++E D W ++ +
Sbjct: 265 QKVEQLKQSLKEEMSNYKSSVPFEVELNDDWKFFIEST 302
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 25.4 bits (53), Expect = 7.6
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 14 ILKLSLEEKRKIYKSSDF-IDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEK 72
+LK++ ++ +S+D ++ + SK+ +K D + D + + +K K K
Sbjct: 47 LLKMAKRSVEELKRSADEEASVKRKEKKSKHEHKKHKKDKPSADKDRISKKDKKKSKKGK 106
Query: 73 NKSISERVSIFKGDITKLEIDAV--VNAAN 100
+K+ E + I + K+ A+ NA+N
Sbjct: 107 SKTKEESIEINAEEGAKIAQPAIGSANASN 136
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,133,585
Number of Sequences: 5004
Number of extensions: 47177
Number of successful extensions: 173
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 155
Number of HSP's gapped (non-prelim): 27
length of query: 244
length of database: 2,362,478
effective HSP length: 71
effective length of query: 173
effective length of database: 2,007,194
effective search space: 347244562
effective search space used: 347244562
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
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