Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000085-TA|BGIBMGA000085-PA|IPR007087|Zinc finger,
C2H2-type
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 60 2e-09
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 52 3e-07
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 43 2e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 37 0.010
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 36 0.023
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 36 0.023
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 35 0.054
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 34 0.095
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 33 0.17
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 33 0.17
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 33 0.17
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 33 0.22
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 32 0.29
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 32 0.38
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 31 0.51
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 30 1.5
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 30 1.5
SPAC4F10.19c |||zf-HIT protein Hit1 |Schizosaccharomyces pombe|c... 29 2.0
SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyc... 29 2.7
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 2.7
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 29 2.7
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 29 2.7
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 29 2.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 2.7
SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr... 29 2.7
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 29 3.6
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 28 4.7
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 28 4.7
SPAC19B12.11c |||zinc finger protein|Schizosaccharomyces pombe|c... 28 4.7
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 28 6.2
SPBC18E5.09c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 6.2
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 6.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 8.2
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 27 8.2
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 27 8.2
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 27 8.2
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 59.7 bits (138), Expect = 2e-09
Identities = 65/249 (26%), Positives = 93/249 (37%), Gaps = 41/249 (16%)
Query: 471 CGDVFRRRIRMETCMRSHNTD-PDVSHVKCTTCSKNFNSKEELAFHRKRVHR--KRFPCK 527
CG + R +E +R+H+ + P V T CSK F K L H KR H K F C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDY--TGCSKAFYRKSHLKIH-KRCHTNVKPFSCH 86
Query: 528 F--CPTDYDTGKDLFEHLKIHRQVQLTEFKVISEMVNGKEILKCFMCNNSFKELPQLKCH 585
+ C + T + L H+++HR+ K + G C+ F + QL+ H
Sbjct: 87 YDGCDAQFYTQQHLERHIEVHRKP-----KPYACTWEG--------CDECFSKHQQLRSH 133
Query: 586 V--MEDHVEPYSCRY--CRAAIPNIIDFAKHIKSFHPEV-------------EGQSLLDV 628
+ H+ PY C Y C H+ H ++ EG
Sbjct: 134 ISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQ 193
Query: 629 LEAFSKLVQAWKCEECGMQFHEADKLALHQAETHNPDLREQLQIQC--EDCRRVFVSHKG 686
L+ + C CG QF A L H H L E+ C E C++ F
Sbjct: 194 LQNHIREAHVPSCSICGRQFKTAAHLR-HHVVLHQTTLEERKTYHCPMEGCKKSFTRSSA 252
Query: 687 LQSHRRVHH 695
L+ H V H
Sbjct: 253 LKKHISVIH 261
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 713 ECRKMCKDMEALTSHMRLHSPERKFPCKF--CDFRFATAEKRRVHQELHTGDMKYVCFI- 769
EC K L H+R HS ER F C + C F ++H+ HT + C
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYD 88
Query: 770 -CEYQCTSENRLKLH 783
C+ Q ++ L+ H
Sbjct: 89 GCDAQFYTQQHLERH 103
Score = 39.1 bits (87), Expect = 0.003
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 37/223 (16%)
Query: 572 CNNSFKELPQLKCHVM-EDHVEPYSCRY--CRAAIPNIIDFAKHIKSFHPEVEGQSLLDV 628
C+ +F LK H +V+P+SC Y C A +HI+ H + + +
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIE-VHRKPKPYAC--- 115
Query: 629 LEAFSKLVQAWK-CEECGMQFHEADKLALHQAETHNPDLREQLQIQCEDCRRVFVSHKGL 687
W+ C+EC F + +L H + H L Q DC F + + L
Sbjct: 116 ---------TWEGCDEC---FSKHQQLRSHISACHTHLLPYPCTYQ--DCELRFATKQKL 161
Query: 688 QSHRRVHHSVEVECAPPEEAGVMCVECRKMCKDMEALTSHMR-LHSPERKFPCKFCDFRF 746
Q+H H + + P E+ CV + + L +H+R H P C C +F
Sbjct: 162 QNHVNRAHEKIISYSCPHES---CVG-HEGFEKWSQLQNHIREAHVPS----CSICGRQF 213
Query: 747 ATAEKRRVHQELHTGDMK----YVCFI--CEYQCTSENRLKLH 783
TA R H LH ++ Y C + C+ T + LK H
Sbjct: 214 KTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKH 256
Score = 35.5 bits (78), Expect = 0.031
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 19/145 (13%)
Query: 660 ETHNPDLREQLQI-QC--EDCRRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMC--VEC 714
E + +LR +I C E+C + + L+ H R H + E +C C
Sbjct: 10 EIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSN---------ERPFVCDYTGC 60
Query: 715 RKMCKDMEALTSHMRLHSPERKFPCKF--CDFRFATAEKRRVHQELHTGDMKYVCFI--C 770
K L H R H+ + F C + CD +F T + H E+H Y C C
Sbjct: 61 SKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGC 120
Query: 771 EYQCTSENRLKLHKRSAKHQSMKEY 795
+ +C S+++ SA H + Y
Sbjct: 121 D-ECFSKHQQLRSHISACHTHLLPY 144
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/78 (32%), Positives = 34/78 (43%)
Query: 714 CRKMCKDMEALTSHMRLHSPERKFPCKFCDFRFATAEKRRVHQELHTGDMKYVCFICEYQ 773
C K L SHM H+ R F C C FA +R H++LHTG + C C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 774 CTSENRLKLHKRSAKHQS 791
+ L H +S Q+
Sbjct: 637 FARMDALNRHYKSEVGQN 654
Score = 33.5 bits (73), Expect = 0.13
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Query: 421 KIDNQSKKVD---SLKSSIGKKKK-NAVIETKVEKIDIEPIAEKKTDKEGYVCICGDVFR 476
KI+N + K + S++++ + + N+++ K E + + YVC +
Sbjct: 520 KIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNK 579
Query: 477 RRIRMETCMRSHNTDPDVSHVKCTTCSKNFNSKEELAFHRKRVHR--KRFPCKFCPTDYD 534
R R NT + +C+ C K+F + + H +++H K F C C +
Sbjct: 580 RFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCNQRFA 638
Query: 535 TGKDLFEHLK 544
L H K
Sbjct: 639 RMDALNRHYK 648
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 9/85 (10%)
Query: 677 CRRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMCVECRKMCKDMEALTSHMRLHSPERK 736
C + F L+SH H + C C+K H +LH+ +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRP---------FQCSICKKSFARQHDKRRHEQLHTGIKA 627
Query: 737 FPCKFCDFRFATAEKRRVHQELHTG 761
F C C+ RFA + H + G
Sbjct: 628 FACVTCNQRFARMDALNRHYKSEVG 652
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 704 PEEAGVMCVECRKMCKDMEALTSHMR-LHSPERKFPCKFCDFRFATAEKRRVHQELH-TG 761
P +C EC K K E L H+R LH+ E+ F C C RF+ + R H+ LH
Sbjct: 418 PGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNA 476
Query: 762 DMKYVCF 768
+ CF
Sbjct: 477 SPRLACF 483
Score = 34.7 bits (76), Expect = 0.054
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 456 PIAEKKTDKEGYVCICGDVFRRRIRMETCMR-SHNTDPDVSHVKCTTCSKNFNSKEELAF 514
P + + T++ G + G + RR+ R + + S P C CSK F E L
Sbjct: 381 PNSMEATEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRR 440
Query: 515 HRKRVH--RKRFPCKFCPTDYDTGKDLFEHLKIH 546
H + +H K F C C + +L +H ++H
Sbjct: 441 HIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 411 TKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDI--EPIAEKKTDKEGYV 468
T S+KR+K + ++K +S GK K ++ + I T ++ +V
Sbjct: 395 TDGSMKRRKRR-QPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFV 453
Query: 469 CICGDVFRRRIRMETCMRSH-NTDP 492
CICG F RR + R H N P
Sbjct: 454 CICGKRFSRRDNLRQHERLHVNASP 478
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 701 CAPPEEAGVMCVE--CRKMCKDMEALTSHMRLHSPERKFPCKFCDFRFATAEKRRVHQEL 758
C P + +C+ C K + SH++ H +R + C C F + H +
Sbjct: 435 CGPEADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRI 494
Query: 759 HTGDMKYVCFICEYQCTSENRLKLHKR 785
H YVC C + + L HK+
Sbjct: 495 HENGRPYVC-ECLKRFNRLDALNRHKQ 520
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 657 HQAETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVHHS 696
+ E+H +C+ C+ FV H L+ H R+H +
Sbjct: 458 YNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHEN 497
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 35.9 bits (79), Expect = 0.023
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 734 ERKFPCKFCDFRFATAEKRRVHQELHTGDMKYVCFICEYQCTSENRLKLH 783
+R FPC C RF E H+ H+ C CE +C ++ LK H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 711 CVECRKMCKDMEALTSHMRLHSPERKFPCKFCDFRFATAEKRRVH-QELH 759
C +C K E LT H HS PC +C+ + + + H Q H
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 560 MVNGKEILKCFMCNNSFKELPQLKCH-VMEDHVEPYSCRYCRAAIPNIIDFAKHIKSFHP 618
+++ K + C C F L H EP C YC +HI+ FH
Sbjct: 24 LIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
Query: 619 E----VEG-QSLLDVLEAFSK 634
+ EG + +LDV A S+
Sbjct: 84 DKSVIEEGSKDVLDVKAAASQ 104
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 35.9 bits (79), Expect = 0.023
Identities = 43/221 (19%), Positives = 90/221 (40%), Gaps = 14/221 (6%)
Query: 54 LKMNEISTDDTESNDVDDEIVTDGPETDQIVNRTTEDVTPINTYTRHEELNQKLSIKVEG 113
++MN + +E ++ DDE D D I N E + Y+R Q + +
Sbjct: 58 MQMN-FEDEYSEFSNEDDEAEIDNSFADSIPNEP-EIPDMQDEYSRDSHSQQSVEEQNNT 115
Query: 114 GQSEMSVNAGTRADEADLREANVDNVSNADATDAGINVKTEHFTYGDFNKDCPKSQLVIK 173
++ + + AD+ + N N+++T+ +N E T G N+D
Sbjct: 116 TNTDEDASVNEFSVAADISDVNTLGKDNSESTEEPVNEVNETATLG--NEDV-------- 165
Query: 174 QEYDDIYSEGVSQSSDCSIKILSVGTL-KDELKRQECGIPDYSDAVKLEATGDDFTSFDY 232
E SEG+ + + G L ++LK + + ++++ L + ++ D
Sbjct: 166 GERSGFPSEGLDNEPESQRDLDETGNLAPEDLKDEVKSVHEFNEPNDLRQQEESYSDDDD 225
Query: 233 PNYDDSMDSNEAAAFCRVETCLQEDGQRIERNQ-IYDDKQD 272
N ++ D NE ++ ++ R+ + + I+ K+D
Sbjct: 226 TNVNEFEDVNEIENEHQLSVADEDQTSRLVKGKMIFVGKED 266
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 711 CVECRKMCKDMEALTSHMRLHSPERKFPCKF--CDFRFATAEKRRVHQELHT 760
C C K +E T H+R H+ E+ C F C RF+ +++ H +HT
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 735 RKFPCKFCDFRFATAEKRRVHQELHTGDMKYVCFI--CEYQCTSENRLKLHKR 785
R + C C F E + H HTG+ +VC C + + + L H R
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 33.9 bits (74), Expect = 0.095
Identities = 44/224 (19%), Positives = 94/224 (41%), Gaps = 15/224 (6%)
Query: 240 DSNEAAAFCRVETCLQEDGQRIERNQIYDDKQDLYRVIK--EEEHLTVTDTHI-ISNKLT 296
D E+ CR E ++ Q+I DD Q +K E +H+ + D + I+ + T
Sbjct: 682 DLQESLEKCRSE--IESFDQKI--TACLDDLQKAQLSLKQFERDHIPLKDELVTITGETT 737
Query: 297 NTSLYANPYDVLIKSKKGLVMEIRPMSGRNFGMKSGNPEEILPTIDNYDDYEAFQLNSIT 356
+ + +++ +V+E+ + + +KS E+ +D D + L S++
Sbjct: 738 DLQESMHHKSRMLEL---VVLELHTLEQQANDLKS----ELSSEMDELDPKDVEALKSLS 790
Query: 357 GDVASLEQEAYGLLXXXXXXXXXXXHVCPKCG-NAYASETCLKRHLKVHDTIEKQTKTSV 415
G + +L E ++ + + N Y LK + + I++ SV
Sbjct: 791 GQIENLSHEFDAIIKERAHIEARKTALEYELNTNLYLRRNPLKAEIGSDNRIDESELNSV 850
Query: 416 KRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAE 459
KR K +N+ + + S S + ++ + E ++ ++E + E
Sbjct: 851 KRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEE 894
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 713 ECRKMCKDMEALTSHMRLHSPERKFPCKFCDFRFATAEKRRVH-QELH 759
+C K E L H R H + F C FC+ FA ++ H Q++H
Sbjct: 32 DCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 572 CNNSFKELPQLKCHVM-EDHVEPYSCRYCRAAIPNIIDFAKHIKSFHPEVEGQSLLDVLE 630
C SF L+ H ++V+ +SC +C A +H++ H + + S +L
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLSERRMLN 92
Query: 631 A 631
A
Sbjct: 93 A 93
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 33.1 bits (72), Expect = 0.17
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 405 DTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKK-TD 463
DTI + S K++K NQ KK S K +I +N + + DI+ +A+ + D
Sbjct: 205 DTIGVSSALSKKKKKRNRKNQKKK--STKQNIEATTENDALSESISTPDIQKVAQSEDVD 262
Query: 464 KE-GYVCICGDVFRRRIRMETCMRSHNTDPDVSHVKCTTCSKNFNSKEELAFHRKRVH 520
E V + RR I + + + N + H T N + FH ++H
Sbjct: 263 AEQDTVADSKEEERRDIANDDLIVNANAKEPMHHFSFTDLDTLLN-WPKYVFHHHKIH 319
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 33.1 bits (72), Expect = 0.17
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 673 QCEDCRRVFVSHKGLQSHRRVHHSVE 698
+C+ C +FV GL +H+R +H VE
Sbjct: 140 RCDKCDMMFVKQSGLTNHKRTYHQVE 165
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 674 CEDCRRVFVSHKGLQSHRRVHHSVEV 699
CEDCR F+S HRR HH +
Sbjct: 437 CEDCRE-FISLNAALDHRRSHHQQNI 461
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 410 QTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDKEGYVC 469
++K S D+ + ++ SS+ K T +K +P A + K+ YVC
Sbjct: 18 ESKVSENLMSINSDSGTSNANT-PSSVTSNSKPVASSTAAKK---DPNAPPQKVKQ-YVC 72
Query: 470 -ICGDVFRRRIRMETCMRSHNTDPDVSHVKC----TTCSKNFNSKEELAFHRKRVHRKRF 524
C F R ++ +RSH + + + T C + F+ ++ L H++++HR
Sbjct: 73 ETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNPQ 132
Query: 525 P 525
P
Sbjct: 133 P 133
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 702 APPEEAG-VMCVECRKMCKDMEALTSHMRLHSPERKFPCKFCD 743
APP++ +C C + +E L H+R H+ E+ F C D
Sbjct: 62 APPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 432 LKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDKE 465
LK KK ++ ETK EK ++P A+KK KE
Sbjct: 75 LKGQDSNHKKASLTETKTEKAKVKPKAKKKNSKE 108
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 401 LKVHDTIEKQTK-TSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAE 459
LK D+ K+ T K +KAK+ ++KK +S K I K K +T V K + +++
Sbjct: 75 LKGQDSNHKKASLTETKTEKAKVKPKAKKKNS-KEKISKSSKQDEHKTDVHKESVSKLSK 133
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 31.9 bits (69), Expect = 0.38
Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 13/103 (12%)
Query: 659 AETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMCVECRKMC 718
++ HN D R + + R++ SH G S + C EC +
Sbjct: 429 SDHHNNDKRAHVSRRHSTSRKIAQSHTGSSS-----------TSSAANVRYRCTECLQGF 477
Query: 719 KDMEALTSHMRLHSPERKFPCKF--CDFRFATAEKRRVHQELH 759
+L H H+ ER F C + C F R HQ +H
Sbjct: 478 SRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 397 LKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIE 455
++R +K +D IE + KT+++ +K +V +K N + + EK+ IE
Sbjct: 39 IERRVKKYDQIESEYKTNIENEKKAFIKDVSQVQQKIKEFEIQKANQIKQLNEEKLSIE 97
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 711 CVECRKMCKDMEALTSHMRLHSPERKFPCKF--CDFRFATAEKRRVHQELH 759
C C+++ E H+R H+ E+ F C + C RF ++ H H
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 735 RKFPCKFCDFRFATAEKRRVHQELHTGDMKYVCFI--CEYQCTSENRLKLHKRS 786
+ + C FC F E + H HTG+ + C C+ + T + L H R+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRT 55
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 29.9 bits (64), Expect = 1.5
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 21/239 (8%)
Query: 52 EELKMNEISTDDTESNDVDDEIVTDGPETDQIVNRTTEDVTPINTYTRHEELNQKLSIKV 111
E +K+ + +++ + + + + ++ V + ++E+ L+I V
Sbjct: 731 EPVKLEQPINENSNVEEAEKDYQPSEKDDKSLIGGILSTVEMTQSTDVNDEIENTLTIPV 790
Query: 112 EGGQSEMSVNAGTRADEADLREANVDNVSNADATDAGINVKTEHFTYGDFNKDCPKSQLV 171
E E S N ++E DL + VD +N + D +V E T D DC V
Sbjct: 791 E---VEHSDNIDKGSEENDLGKEAVDEANN-NQNDVLESVVVEQSTTTD---DCENK--V 841
Query: 172 IKQEYDDIYSEGVSQSSDCSIKILSVGTLKDELKRQECGIPDYSDAVKLEATGDDFTSFD 231
+ + +D S ++ I ++G ++ K E I + + + + D + +
Sbjct: 842 YEGQMNDKNSSLDMVNACEGINQTAIGFVEKPDKVTEL-IDEAEENIDIS---QDISMTE 897
Query: 232 YPNYDDSMDSNEAAAFCRVETCLQEDGQRIERNQIYDDKQDLYRVIKEEEHLTVTDTHI 290
DD + + + VE Q+D IE++++ D K+ +KE+E+LT + I
Sbjct: 898 TNAVDDEVQAENSILQDEVEETRQDD---IEKDELEDIKE-----VKEDENLTTLEETI 948
>SPAC4F10.19c |||zf-HIT protein Hit1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 154
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 384 CPKCGNAYASETCLKRHLKVHDTIEKQTKTSVKRQKAKID 423
CPKC Y S C K H +T+ T+ K K ++
Sbjct: 16 CPKCSFPYCSLPCWKIHQSQCETVNDNNTTTFKGVKEPLN 55
>SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 216 DAVKLEATGDDFTSFDYPNYDDS--MDSNEAAAFCRVETCLQEDGQRIERNQIYDDKQDL 273
D+ KL + D FDYP+ + S +SN + R E D + + + DD +D+
Sbjct: 168 DSQKLSKSSSDLPQFDYPSLNSSPTFNSNLPISSSRFEKTSLSDSKLVSPEPL-DDNKDI 226
Query: 274 YRVIK 278
+ K
Sbjct: 227 QFIKK 231
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 636 VQAWKCEECGMQ-FHEADKLALHQAETHNPDLREQLQ 671
+Q W E CG Q + E+DK + E HN DL ++ Q
Sbjct: 2195 LQKWYEEWCGKQDWDESDKSVVCWIEEHNDDLSKRTQ 2231
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 415 VKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDK 464
+K +KAKI NQ K + K +GK+K +E+ + +D AEK+ K
Sbjct: 311 LKEEKAKIKNQLFKSEEEKDPVGKQK--LPLESSLSPLD-HSSAEKEMQK 357
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 591 VEPYSCRYCRAAIPNIIDFAKHIKSFH----PE----VEGQSLLDVLEAFSKLVQAWKCE 642
+ P C +C A+ + KH+K+ H PE V+ SL D L K+ + C
Sbjct: 205 LSPRDCLFCAASFSSFDTCKKHMKASHSLYIPEREYLVDEPSLFDYLA--EKISIGFTCL 262
Query: 643 ECGMQFHEADKLALHQAE 660
C +F + + H +
Sbjct: 263 TCNREFKSLEAVRAHMQQ 280
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 496 HVKCTTCSKNFNSKEELAFHRKRVHRKRFPCKFCPTDYDTGKDLFEHLKIHRQVQLTEFK 555
H KC C+ +F +EL H + H + C C D G+ ++ K + ++ F+
Sbjct: 244 HPKCEFCNTHFYDDDELFKHCREKHER---CYIC--DQVAGRPTHQYFKNYDSLE-RHFE 297
Query: 556 VISEMVNGKEILKCFMCNNSFKELPQLKCHVMEDHVEPYSCRYCRAA 602
+ +E L+ F LK H +++H ++ R R A
Sbjct: 298 KDHYICRERECLERKFV--VFGTEIDLKAHQLDEHPHNFTQRELREA 342
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 640 KCEECGMQFHEADKLALHQAETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVHHSV-- 697
KCE C F++ D+L H E H Q+ + F ++ L+ H H +
Sbjct: 246 KCEFCNTHFYDDDELFKHCREKHERCYICD-QVAGRPTHQYFKNYDSLERHFEKDHYICR 304
Query: 698 EVEC 701
E EC
Sbjct: 305 EREC 308
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 656 LHQAETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMCVEC 714
L Q T N LR+ C++C V H+ R++H++ + C G + +C
Sbjct: 293 LRQLATLNGTLRDDENQVCQNCGNV--GHRRFDCPERINHTMNIVCRHCGSIGHIARDC 349
>SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 599
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 58 EISTDDTESNDVDDEIVTDGPETDQIVNRTTEDVTPINTYTRHEELNQKLS 108
EI + + ++ +DE+VTD T N +E +T Y RH ++ +++
Sbjct: 247 EIQVEVDDDDEEEDEVVTDDDGTS---NADSEVITASTLYERHTAISSEMT 294
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 28.7 bits (61), Expect = 3.6
Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 16/138 (11%)
Query: 417 RQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKV--EKIDIEPIAEKKTDKEGYVC----- 469
+ + + +S D++K+S G K+ + K E + I ++ DK + C
Sbjct: 28 KNSSNTNEESSSQDNMKASFGSSKRYDERQKKKRSEYRRLRRINQRNRDKFCFACRQQGH 87
Query: 470 ICGDVFRRRIRMETCMRSHNTDPDVS---------HVKCTTCSKNFNSKEELAFHRKRVH 520
I D + + C R + + ++ KC C +N + + + K ++
Sbjct: 88 IVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAKCFICHENGHLSGQCEQNPKGLY 147
Query: 521 RKRFPCKFCPTDYDTGKD 538
K CKFC + + KD
Sbjct: 148 PKGGCCKFCSSVHHLAKD 165
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 405 DTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKK 461
D+ K ++ S+KR+K + N + VDS S ++ ++ ET+ ++E I +++
Sbjct: 126 DSSNKNSEVSIKRRKTE-SNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQER 181
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 385 PKCGNAYAS-ETCLKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNA 443
P+ +A A+ E +R D T+ V K + KK S KSS +++
Sbjct: 42 PEASSAGATDEDDSERKSSAKDLTTPVTEGEVDELKDMFSSMKKKKKSKKSSASAEEQTE 101
Query: 444 VIETKVEKIDIEPIAEKKTDKE 465
I T+ ++D + +KK K+
Sbjct: 102 DITTESGELDFSSMKKKKKKKK 123
>SPAC19B12.11c |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 124
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 492 PDVSHVKCTTCSKNFNSKEELAFHRK-RVHRKR 523
P + C C++ F+S + L H+K +VH++R
Sbjct: 51 PGLGQHYCIECARYFDSSQALLVHKKGKVHKRR 83
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 401 LKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEK 460
L + E + VK+QKA N+S ++ S G K+ +ET+ ++ ++ K
Sbjct: 53 LPISQDKEMDISSPVKKQKASYSNKSPNKAPIQKSRGSSLKSH-LETESQQTPVKRRRRK 111
Query: 461 KTDKE-GYVCICG 472
T + Y CG
Sbjct: 112 ATIRNVDYCSACG 124
>SPBC18E5.09c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 128
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 228 TSFDYPNYDDSMDSNEAAAFCRVETCLQED 257
T+F +P+YD S + E FC V L ++
Sbjct: 19 TNFSFPSYDLSFNETEHGVFCYVSRPLTKE 48
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 400 HLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKK 441
H+ V + KQT ++ K + +NQ K+++ +S + K+++
Sbjct: 7 HISVLPVMNKQTSLVLQNLKEETENQLKELEKKRSQLHKEEQ 48
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 225 DDFTSFDYPNYDDSMDSNEAAAFCRVETCLQEDG 258
DDF Y + D ++ N+ + R+ET +EDG
Sbjct: 237 DDFLDNYYKDDDTVLEDNQLKSNSRIETLEEEDG 270
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 419 KAKIDNQSKKVDSLKSSIGKKKKNAVIETKVE-KIDIEPIAEKKTDKE 465
K K KK D KSS +KKN VIE+ E ++++E E + D++
Sbjct: 29 KNKKRKPEKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ 76
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 766 VCFICEYQCTSENRLKLHKRSAKHQ 790
+C +C S+N+L+ H+ S KH+
Sbjct: 271 MCMVCNKNFRSQNQLENHENSKKHK 295
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 519 VHRKRFPCKFCPTDYDTGKDLFEHLKIHRQVQLTEFKVISEMVNGK 564
+ + +F KF P D D F+H+ I+ EFK + ++ +G+
Sbjct: 208 IRQSKFLRKFDPIISDGIMDHFQHIGINVHTNSLEFKKVEKLPSGE 253
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.132 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,905,181
Number of Sequences: 5004
Number of extensions: 174776
Number of successful extensions: 712
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 630
Number of HSP's gapped (non-prelim): 98
length of query: 848
length of database: 2,362,478
effective HSP length: 79
effective length of query: 769
effective length of database: 1,967,162
effective search space: 1512747578
effective search space used: 1512747578
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -