Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000085-TA|BGIBMGA000085-PA|IPR007087|Zinc finger,
C2H2-type
(848 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 45 2e-04
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 44 6e-04
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 42 0.002
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 42 0.002
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 40 0.007
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 40 0.009
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 38 0.028
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 38 0.028
At2g02790.1 68415.m00222 calmodulin-binding family protein very ... 37 0.065
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 36 0.085
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 36 0.15
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 35 0.20
At4g25160.1 68417.m03622 protein kinase family protein contains ... 35 0.26
At5g61190.1 68418.m07676 zinc finger protein-related contains Pf... 34 0.34
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 34 0.34
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 34 0.46
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 33 0.60
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 33 0.80
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 33 0.80
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 33 0.80
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 33 0.80
At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein ... 33 1.1
At2g31790.1 68415.m03881 UDP-glucoronosyl/UDP-glucosyl transfera... 33 1.1
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 33 1.1
At1g48090.2 68414.m05363 C2 domain-containing protein contains P... 33 1.1
At1g48090.1 68414.m05362 C2 domain-containing protein contains P... 33 1.1
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 32 1.4
At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein si... 32 1.4
At4g00990.1 68417.m00133 transcription factor jumonji (jmjC) dom... 32 1.4
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 32 1.4
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 32 1.8
At4g39100.1 68417.m05536 PHD finger family protein / bromo-adjac... 32 1.8
At3g11385.1 68416.m01386 DC1 domain-containing protein contains ... 32 1.8
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 32 1.8
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 32 1.8
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 32 1.8
At5g45410.1 68418.m05580 expressed protein similar to unknown pr... 31 3.2
At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein ... 31 3.2
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 31 3.2
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 31 3.2
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 31 3.2
At2g35550.1 68415.m04354 expressed protein 31 3.2
At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related conta... 31 3.2
At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF051... 31 4.2
At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative non-co... 31 4.2
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 31 4.2
At1g22970.1 68414.m02870 expressed protein 31 4.2
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id... 30 5.6
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 30 5.6
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 30 5.6
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 30 5.6
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 30 5.6
At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger) fa... 30 5.6
At2g35550.2 68415.m04355 expressed protein 30 5.6
At2g16270.1 68415.m01863 expressed protein and genefinder; expr... 30 5.6
At1g31390.1 68414.m03843 meprin and TRAF homology domain-contain... 30 5.6
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 30 7.4
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 30 7.4
At3g53510.1 68416.m05908 ABC transporter family protein breast c... 30 7.4
At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A) co... 30 7.4
At3g23370.1 68416.m02947 expressed protein ; expression supporte... 30 7.4
At3g13010.1 68416.m01621 hAT dimerisation domain-containing prot... 30 7.4
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 30 7.4
At2g22795.1 68415.m02704 expressed protein 30 7.4
At1g32490.1 68414.m04009 RNA helicase, putative similar to ATP-d... 30 7.4
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 29 9.8
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 29 9.8
At5g51795.1 68418.m06422 Kin17 DNA-binding protein-related 29 9.8
At5g45030.1 68418.m05521 expressed protein 29 9.8
At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) ident... 29 9.8
At4g14700.1 68417.m02259 replication control protein, putative s... 29 9.8
At4g01930.1 68417.m00257 DC1 domain-containing protein contains ... 29 9.8
At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein ... 29 9.8
At2g31750.1 68415.m03877 UDP-glucoronosyl/UDP-glucosyl transfera... 29 9.8
At2g19090.1 68415.m02229 expressed protein contains Pfam profile... 29 9.8
At1g56660.1 68414.m06516 expressed protein 29 9.8
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 29 9.8
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 29 9.8
At1g09570.1 68414.m01073 phytochrome A (PHYA) identical to SP|P1... 29 9.8
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 45.2 bits (102), Expect = 2e-04
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 18/119 (15%)
Query: 675 EDCRRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMCVECRKMCKDMEALTSHMRLHSPE 734
E C+ F S LQ+H+R + E C K + + L H R+H E
Sbjct: 1220 EGCKMTFESKAKLQTHKRNRCTHE--------------GCGKKFRAHKYLVLHQRVHKDE 1265
Query: 735 RKFPC--KFCDFRFATAEKRRVHQELHTGDMKYVCFI--CEYQCTSENRLKLHKRSAKH 789
R F C K C F R H LHTG+ Y+C + C + H+R H
Sbjct: 1266 RPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRRKTMH 1324
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 43.6 bits (98), Expect = 6e-04
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 649 HEADKLALHQAETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVH--HSVEVECAPPE- 705
HEA + L Q + + E+ I CE C + FVS K L H+R+H + + P+
Sbjct: 57 HEAKSMDLEQGDVEEEEGEEKKHICCE-CGKRFVSGKALGGHKRIHVLETRKFSMMRPKM 115
Query: 706 --------EAG---VMCVECRKMCKDMEALTSHMRLHSPER 735
E G V C C K M+AL HMR H P+R
Sbjct: 116 VSGMVGRSERGDLEVACCVCYKKFTSMKALYGHMRFH-PDR 155
Score = 33.1 bits (72), Expect = 0.80
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 698 EVECAPPEEAGVMCVECRKMCKDMEALTSHMRLHSPERKFPCKFCDFRFATAEKRRVHQE 757
+VE EE +C EC K +AL H R+H E + KF R E
Sbjct: 68 DVEEEEGEEKKHICCECGKRFVSGKALGGHKRIHVLETR---KFSMMRPKMVSGMVGRSE 124
Query: 758 LHTGDMKYVCFICEYQCTSENRLKLHKR 785
GD++ C +C + TS L H R
Sbjct: 125 --RGDLEVACCVCYKKFTSMKALYGHMR 150
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 698 EVECAPPEEAGVMCVE--CRKMCKDMEALTSHMRLHSPERKFPC--KFCDFRFATAEKRR 753
E E P E +C C K D+ AL H +H ER++ C + C +F + K +
Sbjct: 68 EPEPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHG-ERQYVCDQEGCGKKFLDSSKLK 126
Query: 754 VHQELHTGDMKYVC 767
H +HTG+ Y+C
Sbjct: 127 RHYLIHTGERNYIC 140
Score = 38.3 bits (85), Expect = 0.021
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Query: 675 EDCRRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMCVECRKMCKDMEALTSHMRLHSPE 734
+ C + F L+ H +H + C ++ G C K D L H +H+ E
Sbjct: 84 DGCGKTFFDVSALRKHSHIHGERQYVC---DQEG-----CGKKFLDSSKLKRHYLIHTGE 135
Query: 735 RKFPCKF--CDFRFATAEKRRVHQELHTGDMKYVCFI--CEYQCTSENRLKLH 783
R + C + C F+ R H + H+ + ++C C + E +LK H
Sbjct: 136 RNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNH 188
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 41.5 bits (93), Expect = 0.002
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 714 CRKMCKDMEALTSHMRLHSPER--KFPCKFCDFRFATAEKRRVHQELHTGDMKYVCFICE 771
C K + L H R+HS +R K P K C F A R H +HTG YVC E
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVC--AE 1324
Query: 772 YQCTSENR----LKLHKRSAKHQSMK 793
C R HKR H K
Sbjct: 1325 PDCGQTFRFVSDFSRHKRKTGHSVKK 1350
Score = 32.3 bits (70), Expect = 1.4
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 23/129 (17%)
Query: 638 AWKC--EECGMQFHEADKLALHQAETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVHH 695
A++C E C M F +L LH+ + C + F SHK L H+RVH
Sbjct: 1236 AYQCNMEGCTMSFSSEKQLMLHKRNI----------CPIKGCGKNFFSHKYLVQHQRVHS 1285
Query: 696 SVEVECAPPEEAGVMCVECRKMCKDMEALTSHMRLHSPERKFPCKFCD----FRFATAEK 751
P + C+ K + T H+R+H+ R + C D FRF +
Sbjct: 1286 DDRPLKCPWK-------GCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFS 1338
Query: 752 RRVHQELHT 760
R + H+
Sbjct: 1339 RHKRKTGHS 1347
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 489 NTDPDVSHVKCTT--CSKNFNSKEELAFHRKRVHRKRFPCKFCPTDYDTGKDLFEHLKIH 546
N + + + +C C+ +F+S+++L H++ + P K C ++ + K L +H ++H
Sbjct: 1229 NEEEECAAYQCNMEGCTMSFSSEKQLMLHKRNI----CPIKGCGKNFFSHKYLVQHQRVH 1284
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 39.9 bits (89), Expect = 0.007
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 591 VEPYSCRYCRAAIPNIIDFAKHIKSFHP-EVEGQSLLDVLEAFSKLVQAWKCEECGMQFH 649
+ Y C+YC + KHI+S H E+E + + E + C+ECG +F
Sbjct: 17 IRNYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEFK 76
Query: 650 EADKLALHQAETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVHHSVEVEC 701
+ L H ++H+ L +DC + L H H +C
Sbjct: 77 KPAHLKQHM-QSHS--LERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKC 125
Score = 39.5 bits (88), Expect = 0.009
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Query: 665 DLREQLQIQCEDCR-RVFVSHKGLQSHRRVHHSVEVE---CAPPEEAGV--MCVECRKMC 718
D+R L C R + ++ K +QSH ++ E + C EE+ C EC
Sbjct: 16 DIRNYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEF 75
Query: 719 KDMEALTSHMRLHSPERKFPCKFCDFRFATAEKRRVHQELHTGDMKYVCFIC-EYQCTSE 777
K L HM+ HS ER F C D A + +R+ H H K F C + C SE
Sbjct: 76 KKPAHLKQHMQSHSLERSFTCYVDD--CAASYRRKDHLNRHLLTHKGKLFKCPKENCKSE 133
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 470 ICGDVFRRRIRMETCMRSHNTDPDVSHVKCTT--CSKNFNSKEELAFHRKRVHR--KRFP 525
ICG ++ ++ +R+H+ D +KC CS F+ L H K VH + F
Sbjct: 279 ICGSKHLKK-NIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFV 337
Query: 526 CKF 528
C F
Sbjct: 338 CGF 340
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 39.5 bits (88), Expect = 0.009
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 2 IDVLGANQDENASQNKDLGKINIKSYIELEGNTIGLLKQEEIPACVIEACEELKMNEIST 61
I+ LGA ++ DL ++N+K +EL N + + +EA +E NE+
Sbjct: 432 IEELGAKCQGLEKESGDLAEVNLKLNLEL-ANHGSEANELQTKLSALEAEKEQTANELEA 490
Query: 62 DDTESNDVDDEIVTDGPETDQIVNRTTEDVTPINT-YTRHEELNQKLSIKVEGGQSEMSV 120
T D+ ++ ++G + ++ TE+ +N + +E Q + K+E + S
Sbjct: 491 SKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQSVIAKLEEQLTVESS 550
Query: 121 NAGTRADEAD 130
A T E +
Sbjct: 551 KADTLVSEIE 560
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 37.9 bits (84), Expect = 0.028
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 495 SHVKCTTCSKNFNSKEELAFHR------------KRV-HRKR----FPCKFCPTDYDTGK 537
+H +C TC++ F+S + L HR ++V HR + C C + TG+
Sbjct: 47 NHFECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQ 106
Query: 538 DLFEHLKIHRQVQLTEFKVISEMVNGKEILKCFMCNNSFKELPQLKCHVMED 589
L H++ HR +TE ++ +V + + C++S KE+ L +E+
Sbjct: 107 ALGGHMRKHRTSMITEQSIVPSVVYSRPVFN--RCSSS-KEILDLNLTPLEN 155
Score = 30.3 bits (65), Expect = 5.6
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 517 KRVHRKRFPCKFCPTDYDTGKDLFEHLKIHRQVQL-TEFKVISEMVNGKEILKCFMCNNS 575
K H F CK C +D+ + L H H++ +L + + + ++ KC +C+
Sbjct: 42 KTNHNNHFECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQM 101
Query: 576 F 576
F
Sbjct: 102 F 102
Score = 29.5 bits (63), Expect = 9.8
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 673 QCEDCRRVFVSHKGLQSHRRVH-------HSVEVECAPPEEAGVMCVECRKMCKDMEALT 725
+C+ C R F S + L HR H +V+ E C C +M +AL
Sbjct: 50 ECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQALG 109
Query: 726 SHMRLH 731
HMR H
Sbjct: 110 GHMRKH 115
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 37.9 bits (84), Expect = 0.028
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 5/139 (3%)
Query: 459 EKKTDKEGYVC-ICGDVFRRRIRMETCMRS-HNTD--PDVSHVKCTTCSKNFNSKEELAF 514
++K G+ C IC D F RR +E + H+ ++C C +F KE+L
Sbjct: 488 KEKWSFSGFACAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLV 547
Query: 515 HRKRVHRKRFPCKFCPTDYDTGKDLFEHLKIHRQVQLTEFKVISEMVNGKEILKCFMCNN 574
H + VH ++ + F Q+ +E +G C C
Sbjct: 548 HVQAVHPSECKSLTVASECNLTNGEFSQKPEAGSSQIV-VSQNNENTSGVHKFVCKFCGL 606
Query: 575 SFKELPQLKCHVMEDHVEP 593
F LP L H +H+ P
Sbjct: 607 KFNLLPDLGRHHQAEHMGP 625
Score = 32.3 bits (70), Expect = 1.4
Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 12/130 (9%)
Query: 641 CEECGMQFHEADKLALHQAETHNPDLREQ-LQIQCEDCRRVFVSHKGLQSH-RRVHHSVE 698
C C F L +H E H+ E+ + +QC C F + L H + VH S
Sbjct: 498 CAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHPS-- 555
Query: 699 VECAPPEEAGVMCVECRKMCKDMEALTSHMRLH------SPERKFPCKFCDFRF-ATAEK 751
EC A + + + EA +S + + S KF CKFC +F +
Sbjct: 556 -ECKSLTVASECNLTNGEFSQKPEAGSSQIVVSQNNENTSGVHKFVCKFCGLKFNLLPDL 614
Query: 752 RRVHQELHTG 761
R HQ H G
Sbjct: 615 GRHHQAEHMG 624
>At2g02790.1 68415.m00222 calmodulin-binding family protein very low
similarity to SP|P12036 Neurofilament triplet H protein
{Homo sapiens}; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 636
Score = 36.7 bits (81), Expect = 0.065
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 11 ENASQNKDLGKINIKSYIELEGNTIGLLKQ---EEIPACVIEACEELKMNEISTDDTESN 67
+ AS + +GK KS + + + K+ EE+ +++A E+ KMN I ++ +
Sbjct: 357 KKASLSNGIGKATRKSAEKKKEIADAVQKELPIEEVSVSLVDAPEDEKMNLIPVTISKES 416
Query: 68 DVD-DE--IVTDGPETDQIVNRTTEDVTPINTYTRHEELNQKLSIKVEGGQSEMSVNAGT 124
D+D DE +V D PE D++ RT E + E + K++ +++S G
Sbjct: 417 DLDKDEKSLVLDKPEQDEL--RTAERDDKAEEELKTAERDDSAEEKIQEPDAQISSENGN 474
Query: 125 RADE 128
A E
Sbjct: 475 VASE 478
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 36.3 bits (80), Expect = 0.085
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 382 HVCPKCGNAYASETCLKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKK 441
H C C ++S H+++H +IE K +K+ K K+ + KK K IG KK
Sbjct: 49 HFCVICEKQFSSGKAYGGHVRIH-SIEYNNKGKMKKMK-KMKLKKKK----KRKIGLVKK 102
Query: 442 NAVIETKVEKIDIEPIAEKKTDKEGYV--CICGDVFRRRIRMETCMRSH 488
K ++ID+ +TD EG + C+CG F+ + MR H
Sbjct: 103 E-----KEKEIDLA-----RTDVEGKIRCCLCGKEFQTMHSLFGHMRRH 141
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 35.5 bits (78), Expect = 0.15
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 39 KQEEI--PACVIEACEEL--KMNEISTDDTESNDVDDEIVTDGPETDQIVNRTTEDVTPI 94
++EEI P E+ EEL K+ E D E DV E+V + ETD ED+
Sbjct: 351 EEEEIDGPLDSPESVEELHEKLQEELNIDNEERDVKKEVVGEADETDDEYFVAEEDMQG- 409
Query: 95 NTYTRHEELNQKLSIKVEGGQSEMSVNAGTRADEADLREANVD 137
++ + E+ L K+ GQ N ++ ++ D E ++
Sbjct: 410 SSESEDEDDEMTLLKKMVSGQKNKQKNVVSKEEDEDETEVEIE 452
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 35.1 bits (77), Expect = 0.20
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 667 REQLQIQCEDCRRVFVSHKGLQSHRRVHHSVE 698
++Q Q+ C +C RVFVS K L+ H H V+
Sbjct: 59 KQQQQVGCRECGRVFVSLKALRGHMACHGEVK 90
>At4g25160.1 68417.m03622 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 835
Score = 34.7 bits (76), Expect = 0.26
Identities = 33/179 (18%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 39 KQEEIPACVIEACEELKMNEISTDDTESNDVDDEIVTDGPETDQIVNRTTEDVTPINTYT 98
+ + PA +A ++ + + +D+T +D E D +NR++ D T T
Sbjct: 230 RMQHFPAIAGQASVPMETSSVGSDETRCMSLDAEEARDVSS----INRSSTDTTSRWTPR 285
Query: 99 RHEELNQKLSIKVEGGQSEMSVNAGTRADEADLREANVDNVSNADATDAGINVKTEHFTY 158
R + +K ++ E N GTR + + + ++ A++ + + +T
Sbjct: 286 RRDYEERKEAMSSSSSNREYG-NFGTRFSWSGMGVDTTHSRASQQASNMSDALSEQSYTD 344
Query: 159 GDFNKDCPKSQLVIK-QEYDDIYSEGVSQSSDCSIKI--LSVGTLKDELKRQECGIPDY 214
N + +L + + ++Y+ +++ D S K+ L+ L++ +K +E + +Y
Sbjct: 345 NQVNLNFEVEKLRAELRHVQEMYAVAQTETFDASRKLGELNQRRLEEAIKLEELKLKEY 403
>At5g61190.1 68418.m07676 zinc finger protein-related contains Pfam
profile PF04396: Protein of unknown function DUF537,
weak hit to PF00096: Zinc finger C2H2 type
Length = 977
Score = 34.3 bits (75), Expect = 0.34
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
Query: 635 LVQAWKCEECGMQFHEADKLALHQAETHNPDLREQLQIQCEDCRRVFV-----SHKGLQS 689
LV+ C+ C + F D H T+ R L++Q + + V S + L+
Sbjct: 293 LVEPLLCKVCQISFTNNDTYKNH---TYGKKHRNNLELQSGKSKNILVGPAEPSKEVLEK 349
Query: 690 HRRVHHSVEVECAPPEEAGVMCVECRKMCKDMEALTSHMR 729
H ++ V +E A +C+ C +C+ SH+R
Sbjct: 350 HN-MNKKVMIESRAQANAEFVCLMCNVVCQSQIVFNSHLR 388
Score = 30.7 bits (66), Expect = 4.2
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 9/126 (7%)
Query: 678 RRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMCVECRKMCKDMEALTSHMRLHSPERKF 737
R V LQ +R+ + ++ E+ C C +C E T+H L
Sbjct: 214 REKHVPRGSLQENRK--NMLQHSSGATGESATTCRICNVVCDSFEKFTAH--LSDIRHIS 269
Query: 738 PCKFCDFRFATAE--KRRVHQELHTGDMKYVCFICEYQCTSENRLKLHKRSAKHQSMKEY 795
+ R A A + +HQ + + +C +C+ T+ + K H KH++ E
Sbjct: 270 QAAIVESRRAQASVSAKPIHQAVLVEPL--LCKVCQISFTNNDTYKNHTYGKKHRNNLE- 326
Query: 796 LLSGAS 801
L SG S
Sbjct: 327 LQSGKS 332
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 34.3 bits (75), Expect = 0.34
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 668 EQLQIQCEDCRRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMCVECRKMCKDMEALTSH 727
E L+ +C C R F + L H ++ + E C C+K C+ E+L H
Sbjct: 11 ETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPT--------CGVCKKHCRSFESLREH 62
Query: 728 MRLHSPERKFP-------CKFCDFRFATAEKRRVHQE 757
+ P+++ C+FC + RR+HQE
Sbjct: 63 LIGPLPKQECKNIFSLRGCRFCMTILESPNSRRIHQE 99
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 33.9 bits (74), Expect = 0.46
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 707 AGVMCVECRKMCKDMEALTSHMRLHSPERKFPCKFCDFRFATAEKRRVHQELHTGDMKYV 766
A + C C++ + E SH P+R C+FC+F + HQE+ G+ +
Sbjct: 59 APIACSMCKETI-EREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAE-HQEV-CGNRTEL 115
Query: 767 CFICEYQCTSENRLK 781
C YQC S RL+
Sbjct: 116 C----YQCNSYVRLR 126
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 33.5 bits (73), Expect = 0.60
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 673 QCEDCRRVFVSHKGLQSHRRVHHSVE 698
QC+ C++VF SH+ L HR H V+
Sbjct: 151 QCKACKKVFTSHQALGGHRASHKKVK 176
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 33.1 bits (72), Expect = 0.80
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 17/93 (18%)
Query: 673 QCEDCRRVFVSHKGLQSHRRV-HHSVEVECAPPEEAGVMCVECRKMCKDMEALTSHMRLH 731
+C C R F + L H R+ +HSV C C K C+ ++L H+
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPT---------CGICNKHCRSFDSLREHLIGP 57
Query: 732 SPERKFP-------CKFCDFRFATAEKRRVHQE 757
P+++ C+FC + RR+HQE
Sbjct: 58 LPKQECKNIFSIRGCRFCLTILESPNARRIHQE 90
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 33.1 bits (72), Expect = 0.80
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 393 SETCLKRHLK-VHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEK 451
++ C+KR +K + + EK K + + +K K + ++KK+ + + KKKK E K EK
Sbjct: 446 ADICIKRLVKTLEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKKKTEEDEKK-EK 504
Query: 452 I 452
+
Sbjct: 505 V 505
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 33.1 bits (72), Expect = 0.80
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 20/104 (19%)
Query: 485 MRSHNTDPDVSHVKCTTCSKNFNSKEELAFHRKRVHRKRFP------------------- 525
+ H + +C TC+K F+S + L HR + +
Sbjct: 35 LNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFH 94
Query: 526 -CKFCPTDYDTGKDLFEHLKIHRQVQLTEFKVISEMVNGKEILK 568
C C + TG+ L H++ HR E IS M+ +LK
Sbjct: 95 KCSICSQSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLK 138
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 515 HRKRVHRKRFPCKFCPTDYDTGKDLFEHLKIHRQVQLT----EFKVISEMVNGKEILKCF 570
H + +F CK C + + + L H H++ +LT + K +S G KC
Sbjct: 38 HTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCS 97
Query: 571 MCNNSF 576
+C+ SF
Sbjct: 98 ICSQSF 103
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 33.1 bits (72), Expect = 0.80
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 671 QIQCEDCRRVFVSHKGLQSHRRVHHSVE 698
+ +C+ C++VF SH+ L HR H V+
Sbjct: 147 RFECDGCKKVFGSHQALGGHRATHKDVK 174
Score = 29.9 bits (64), Expect = 7.4
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 711 CVECRKMCKDMEALTSHMRLHSPERKF 737
C EC K ++AL HMR H PER++
Sbjct: 67 CTECGKQFGSLKALFGHMRCH-PERQW 92
>At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 287
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 674 CEDCRRVFVSHKGLQSHRRVHHS 696
C+ C R F S GLQSH + HS
Sbjct: 262 CKSCTRTFTSEMGLQSHTKAKHS 284
>At2g31790.1 68415.m03881 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 457
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 8 NQDENASQNKDLGKINIKSYIELEGNTIGLLKQEEIPACVIEACEELKMNEISTDDTESN 67
+Q NA +D+ KI ++ + +G GL +EEI C++E E + EI + +
Sbjct: 377 DQPTNAKFIEDVWKIGVR--VRTDGE--GLSSKEEIARCIVEVMEGERGKEIRKNVEKLK 432
Query: 68 DVDDEIVTDGPETDQIVN 85
+ E +++G +D+ ++
Sbjct: 433 VLAREAISEGGSSDKKID 450
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 470 ICGDVFRRRIRMETCMRSHNTDPDVSHVKCTT--CSKNFNSKEELAFHRKRVHR--KRFP 525
ICG ++ ++ +R+H+ D +KC CS F+ L H K VH + F
Sbjct: 191 ICGSKHLKK-NIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFV 249
Query: 526 CKF 528
C F
Sbjct: 250 CGF 252
>At1g48090.2 68414.m05363 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 3427
Score = 32.7 bits (71), Expect = 1.1
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 124 TRADEADLREANVDNVSNADATDAGINVKTEHFTYGDFNKDCP---KSQLVIKQEYDDIY 180
T + D E N+ AD G V+T+ + YG +C + L++K
Sbjct: 992 TSDGDGDFHEPQTRNMKAADLVITGALVETKLYLYGKIKNECDEQVEEVLLLKVLASGGK 1051
Query: 181 SEGVSQSSDCSIKI-LSVGTLKDELKRQECGIPDY 214
+S S +++ L +KDEL++Q+ G Y
Sbjct: 1052 VHLISSESGLTVRTKLHSLKIKDELQQQQSGSAQY 1086
>At1g48090.1 68414.m05362 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 4144
Score = 32.7 bits (71), Expect = 1.1
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 124 TRADEADLREANVDNVSNADATDAGINVKTEHFTYGDFNKDCP---KSQLVIKQEYDDIY 180
T + D E N+ AD G V+T+ + YG +C + L++K
Sbjct: 992 TSDGDGDFHEPQTRNMKAADLVITGALVETKLYLYGKIKNECDEQVEEVLLLKVLASGGK 1051
Query: 181 SEGVSQSSDCSIKI-LSVGTLKDELKRQECGIPDY 214
+S S +++ L +KDEL++Q+ G Y
Sbjct: 1052 VHLISSESGLTVRTKLHSLKIKDELQQQQSGSAQY 1086
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 32.3 bits (70), Expect = 1.4
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 497 VKCTTCSKNFNSKEELAFHRKR-------VHRKRFPCKFCPTDYDTGKDLFEHLKIHRQV 549
++C S + +S+ HR+ V R+ + C FC + + L H+ IHR+
Sbjct: 1 MECERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRD 60
Query: 550 QLTEFKVISEM-VNGKEILKCF 570
+L + KV ++ V + +CF
Sbjct: 61 RLNKAKVQNDADVALSQTHRCF 82
>At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 549
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 9 QDENASQNKDLGKINIKSYIELEGNTIGLLKQEEIPACVIEACEELKMNEISTDDTESND 68
Q N ++ L +I+ +E TI + + E++ + I E + ++++T+D ND
Sbjct: 181 QSSNTEDSQVLESHDIEE-VESSTRTITVDESEKLNSESIMQDENCEKSDVTTEDAAGND 239
Query: 69 VDDEIVTDGPETDQIVNRTTEDVTPINTYTRHEELNQKLSIKVEGGQSEMSVNAGTRADE 128
D T+ ET+ E+V NT + +E++ S E ++ R
Sbjct: 240 SDS---TNPEETETSPFLANEEVESHNTVNQEKEISSPSSKPKSQAADEDFMSTWQRIIR 296
Query: 129 ADLREAN 135
D AN
Sbjct: 297 LDAVRAN 303
>At4g00990.1 68417.m00133 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 840
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 490 TDPDVSHVKCTTCSKNFNSKEELAFHRKRVHRKRFPCKFCPTDYDTGKDLFEHLKIH 546
TD D+ H +C++CS N +S A RK H + P D +D H + H
Sbjct: 333 TDVDIVH-ECSSCSTNSDSIRRQAAFRKNAHDNFL---YSPNAVDLAEDDIAHFQFH 385
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 12/105 (11%)
Query: 674 CEDCRRVFVSHKGLQSHRRVHH---------SVEVECAPPEEAGVMCV--ECRKMCKDME 722
CE C + F + LQ HRR H+ + EV+ V CV + + D+
Sbjct: 65 CEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLT 124
Query: 723 ALTSHMRLHSPERKFPCKFCDFRFATAEKRRVHQELHTGDMKYVC 767
+ H E+K+ C C ++A + H ++ G +Y C
Sbjct: 125 GIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKI-CGTKEYKC 168
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 723 ALTSHMRLHSPERKFPCKFCDFR-FATAEKRRVHQELHTGDMKYVCFICEYQCTSENRLK 781
A + R H P + + C+ C + F+ R H++ H GD+K+VC C + + +++L
Sbjct: 293 AKNHYKRSHCP-KMYMCRRCSVKHFSVLSDLRTHEK-HCGDIKWVC-SCGTKFSRKDKLM 349
Query: 782 LH 783
H
Sbjct: 350 SH 351
>At4g39100.1 68417.m05536 PHD finger family protein / bromo-adjacent
homology (BAH) domain-containing protein contains Pfam
domain, PF00628: PHD-finger and PF01426: BAH domain
Length = 228
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 208 ECGIPDYSDAVKLEATGDD--FTSFDYPNYDDSMDSNEAAAFCRVETCLQEDGQRIE 262
+C + +S KL++ G+D F F+Y + + D + FC+ E D ++
Sbjct: 100 KCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQ 156
>At3g11385.1 68416.m01386 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 766
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 490 TDPDVSHVKCTTCSKNFNSKEELAFHRKRVH--RKRFPCKFCPTDYDTG 536
T+ + H CTTC F+S L F RK H + P F + +TG
Sbjct: 212 TEDQIYHFSCTTCDVEFHSGHCLRFPRKLTHPYHLQHPLTFTFRNDETG 260
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 31.9 bits (69), Expect = 1.8
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 498 KCTTCSKNFNSKEELAFHRK-RVHRKRFP-CKFCPTDYDTGKDLFEHLKIHRQVQLTEFK 555
+C C K FN +E L H K H P C C + + + EHL + + K
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
Query: 556 VISEMVNGKEILKCFMCNNSFKELPQLKCHVMEDHVEP 593
I C +C F+E L H + H+ P
Sbjct: 78 AIFTKRG------CTLCLQIFEEAFALAEHKNKCHLSP 109
Score = 30.3 bits (65), Expect = 5.6
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 663 NPDLREQLQIQ--CEDCRRVFVSHKGLQSHRRV-HHSVEVECAPPEEAGVMCVECRKMCK 719
NP R ++ ++ C C ++F + L H ++ +HS+ P C C K CK
Sbjct: 6 NPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLH----QPR-----CGVCLKHCK 56
Query: 720 DMEALTSHMRLHSPERKFPCK 740
E++ H+ + K CK
Sbjct: 57 SFESVREHLNVPDHLSKGNCK 77
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 31.9 bits (69), Expect = 1.8
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 498 KCTTCSKNFNSKEELAFHRK-RVHRKRFP-CKFCPTDYDTGKDLFEHLKIHRQVQLTEFK 555
+C C K FN +E L H K H P C C + + + EHL + + K
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
Query: 556 VISEMVNGKEILKCFMCNNSFKELPQLKCHVMEDHVEP 593
I C +C F+E L H + H+ P
Sbjct: 78 AIFTKRG------CTLCLQIFEEAFALAEHKNKCHLSP 109
Score = 30.3 bits (65), Expect = 5.6
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 663 NPDLREQLQIQ--CEDCRRVFVSHKGLQSHRRV-HHSVEVECAPPEEAGVMCVECRKMCK 719
NP R ++ ++ C C ++F + L H ++ +HS+ P C C K CK
Sbjct: 6 NPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLH----QPR-----CGVCLKHCK 56
Query: 720 DMEALTSHMRLHSPERKFPCK 740
E++ H+ + K CK
Sbjct: 57 SFESVREHLNVPDHLSKGNCK 77
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 352 LNSITGDVASLEQEAYGLLXXXXXXXXXXXHVCPKCGNAYASETCLKRHL-KVHDTIEKQ 410
L+S ++ L + L VCP+CG ++S T L H+ K H+ +KQ
Sbjct: 183 LSSAEAGISRLGNDISQKLQFSSSKDNGIVEVCPQCGAKFSSVTSLVEHVEKTHERNKKQ 242
Query: 411 TKTSV 415
+V
Sbjct: 243 NHGNV 247
>At5g45410.1 68418.m05580 expressed protein similar to unknown
protein (pir||T05524)
Length = 342
Score = 31.1 bits (67), Expect = 3.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 293 NKLTNTSLYANPYDVLIKSKKGLVMEIRPMSGRNFGMKSGNPEEILPTIDNYDDYE---- 348
NK TN S + + + ++ KG + E P F + G + I+P DD E
Sbjct: 23 NKPTNLSFSSLSFPIPVQGGKGPIFEDGPGFDSAFKLFHGK-DGIVPLSGFADDSEDEAG 81
Query: 349 --AFQLNSITGDVASLEQEAYG 368
A Q N + G VA++ A+G
Sbjct: 82 RRALQFNPLAGKVATISLSAFG 103
>At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 161
Score = 31.1 bits (67), Expect = 3.2
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 494 VSHVKCTTCSK--NFNSKEELAFHRKRVHRKRFPCKFCPTDYDTGKDLFEHLKIHRQVQL 551
V K + SK +F+S A HR FPC++CP + T + L H H++ +
Sbjct: 12 VGPAKTRSSSKRHSFSSSAHPASHRL------FPCQYCPRKFYTSQALGGHQNAHKRERA 65
Query: 552 TEFKVISEMVNGKEIL 567
+ + + N IL
Sbjct: 66 AARRNLGVLANSPPIL 81
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 671 QIQCEDCRRVFVSHKGLQSHRRVHHSVE 698
+ +C C++VF SH+ L HR H +V+
Sbjct: 161 RFECGGCKKVFGSHQALGGHRASHKNVK 188
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 31.1 bits (67), Expect = 3.2
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 394 ETCLKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKK 441
ETCLKR ++ +++ K V+ ++ + + +KV +++ KKKK
Sbjct: 448 ETCLKRLIEALKEEKEEAKKKVEEEEEEKQRKKEKVKEIEAEKEKKKK 495
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 31.1 bits (67), Expect = 3.2
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 639 WKCEECGMQFHEADKLALHQAETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVH 694
WK ++ Q E D+ H +E + + + + +CE C +VF S++ L HR H
Sbjct: 163 WKQQKKKKQRVEEDETD-HDSEDYKSS-KSRGRFKCETCGKVFKSYQALGGHRASH 216
Score = 29.5 bits (63), Expect = 9.8
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 405 DTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDK 464
D +E +T++S + +++K+ S K + E E ++ T++
Sbjct: 90 DDVESETESSRINPTRRRSKRTRKLGSFDFDFEKLTTSQPSELVAEPEHHSSASDTTTEE 149
Query: 465 EGYVCIC---GDVFRRRIRMETCMRSHNTDPDVS---------HVKCTTCSKNFNSKEEL 512
+ C+ D ++++ + + + TD D KC TC K F S + L
Sbjct: 150 DLAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFKCETCGKVFKSYQAL 209
Query: 513 AFHRKRVHRKRFPC 526
HR H+K C
Sbjct: 210 GGHRAS-HKKNKAC 222
>At2g35550.1 68415.m04354 expressed protein
Length = 271
Score = 31.1 bits (67), Expect = 3.2
Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 11/183 (6%)
Query: 292 SNKLTNTSLYANPYD---VLIKSKKGLVMEIRPMSGRNFGMKSGNPEEILPTIDNYDDYE 348
SN L ++L+ V+ K + M P + N + L T + + +
Sbjct: 18 SNNLERSNLFLYELQREGVIFPLKLAIKMNSFPAQNLMLSATNANKDSGLRTSNAHWLHS 77
Query: 349 AFQLNSITGDVASLEQEAYGLLXXXXXXXXXXXHVCPKCGNAYASETCLKRHLKVHDTIE 408
+ TG S E A G++ H+ P ++T + V+ +
Sbjct: 78 CIAVPKTTGIDLSQEPPAEGVMVPQS-------HLFPPPIRDSRNDTETVKQKSVNQSPS 130
Query: 409 KQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDKEGYV 468
K K +R+K + N+SKK S+ + ++KKN I + D + G
Sbjct: 131 KALKPKPQRKKRSVSNKSKKTPSIPET-KREKKNLDINIDISSFDTSGVPPPVCSCTGVS 189
Query: 469 CIC 471
+C
Sbjct: 190 RVC 192
>At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related contains
similarity to zinc finger protein rts2 GB:U16133
GI:563244 from [Saccharomyces cerevisiae]
Length = 411
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 763 MKYVCFICEYQCTSENRLKLHKRSAKHQ 790
+++ C +C+ QC EN K H S HQ
Sbjct: 24 LRWYCQMCQKQCRDENGFKCHCMSESHQ 51
>At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF05178:
Krr1 family
Length = 638
Score = 30.7 bits (66), Expect = 4.2
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 415 VKRQKAKI-DNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDKE 465
VK QK KI + K D KS K+KKN V+ETK + E AE + + E
Sbjct: 554 VKEQKRKIRELWEGKHDEKKSK--KRKKNDVVETKPTPKEAEAEAEAEAEAE 603
>At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative
non-consensus acceptor splice site AT at exon 2; similar
to DEAD box helicase protein GB:NP_006764 from [Homo
sapiens], contains Pfam profile: PF00270 DEAD/DEAH box
helicase
Length = 568
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 405 DTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETK 448
D +K+++ VK+ + KI+ + +KV++++ G+ +KN VI K
Sbjct: 42 DETQKKSEKKVKKVRGKIEEEEEKVEAMED--GEDEKNIVIVGK 83
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 494 VSHVKCTTCSKNFNSKEELAFHRK-RVHRKRFPCKFCPTDYDTGKDLFEHLKIHRQVQLT 552
+S + C +C+K+F E FH K HR K T + LFE RQ +
Sbjct: 1 MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVT-EALFE----ARQAAIA 55
Query: 553 EFKVISEMVNGKEILKCFMCNNSFKELPQLKCHV-MEDHV 591
+ KV + V + C +CN ++ + H+ + HV
Sbjct: 56 QEKV--KAVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHV 93
>At1g22970.1 68414.m02870 expressed protein
Length = 357
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 40 QEEIPACVIEACEELKMNEISTDDTESNDVDDEIVTDGPETDQIVNRTTEDVT 92
+E PAC + CE N +S+DD + +D+ D++ PE ++ TE V+
Sbjct: 182 KEVKPACPLSECEASGDN-MSSDDDDDDDLGDDL---SPEEMEVATMVTEIVS 230
>At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly
identical to RNA helicase [Arabidopsis thaliana]
GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 671
Score = 30.3 bits (65), Expect = 5.6
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 398 KRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIE 455
++ LK+ D+ E++++ ++K K S++ D +KS +KK + + K+ D+E
Sbjct: 34 EQKLKLSDSDEEESEKKKSKKKDKKRKASEEEDEVKSDSSSEKKKSSKKVKLGVEDVE 91
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 30.3 bits (65), Expect = 5.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 671 QIQCEDCRRVFVSHKGLQSHRRVHH 695
Q +C+ C R+F S + L H+++H+
Sbjct: 273 QYECQICNRMFASGQALGGHKKIHY 297
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 500 TTCSKNFNSKEELAFHRKRVHRKRFPCKFCPTDYDTGKDLFEHLKIHR 547
TT KN NS+ L + K K C C ++ +G+ L H++ HR
Sbjct: 206 TTVFKNNNSRS-LVVYGKASKNKVHECGICGAEFTSGQALGGHMRRHR 252
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 30.3 bits (65), Expect = 5.6
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 9/98 (9%)
Query: 673 QCEDCRRVFVSHKGLQSHRRVHHSVEV-----ECAPPEEAG---VMCVECRKMCKDME-A 723
QC+ C + F S + L HR H ++ +C + A V VE + +
Sbjct: 119 QCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVETVEAGAVGSFLSLQ 178
Query: 724 LTSHMRLHSPERKFPCKFCDFRFATAEKRRVHQELHTG 761
+TS PE+ C C F++ + H H G
Sbjct: 179 VTSSDGSKKPEKTHECSICKAEFSSGQALGGHMRRHRG 216
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 30.3 bits (65), Expect = 5.6
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 673 QCEDCRRVFVSHKGLQSHRRVHHSVEVECAPPEE 706
+C+ C ++F ++GL H ++H S + E A ++
Sbjct: 99 ECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQD 132
Score = 29.5 bits (63), Expect = 9.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 674 CEDCRRVFVSHKGLQSHRRVHHSVEVECA 702
C+ C + FV +GL +H+RVH + + A
Sbjct: 200 CKICGKSFVCSQGLGNHKRVHREISGKLA 228
>At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 555 KVISEMVNGKEILKCFMCNNSFKELPQLKCH 585
K+ E+ KEILKC CN+ KE+ KC+
Sbjct: 812 KLRQELSEFKEILKCKACNDRPKEVVITKCY 842
>At2g35550.2 68415.m04355 expressed protein
Length = 226
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 382 HVCPKCGNAYASETCLKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKK 441
H+ P ++T + V+ + K K +R+K + N+SKK S+ + ++KK
Sbjct: 59 HLFPPPIRDSRNDTETVKQKSVNQSPSKALKPKPQRKKRSVSNKSKKTPSIPET-KREKK 117
Query: 442 NAVIETKVEKIDIEPIAEKKTDKEGYVCIC 471
N I + D + G +C
Sbjct: 118 NLDINIDISSFDTSGVPPPVCSCTGVSRVC 147
>At2g16270.1 68415.m01863 expressed protein and genefinder;
expression supported by MPSS
Length = 759
Score = 30.3 bits (65), Expect = 5.6
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 52 EELKMNEISTDDTE-SNDVDDEIVTDGPETDQIVNRTTEDV 91
EEL ++E S+DDTE S + +E DG E + +V TEDV
Sbjct: 239 EELFISESSSDDTELSVEESEEQEKDGAE-EVVVEEETEDV 278
>At1g31390.1 68414.m03843 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 268
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 389 NAYASETCLKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLK 433
NAY++ TCLK+ D +EK+ K + + +ID + K + LK
Sbjct: 221 NAYSTLTCLKKAGFKLDWLEKKLKEVCEARVQEIDEEWKDLTDLK 265
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 29.9 bits (64), Expect = 7.4
Identities = 35/173 (20%), Positives = 75/173 (43%), Gaps = 9/173 (5%)
Query: 52 EELKMNEISTDDTESNDVD--DEIVTDGPETDQIVNRTTEDVTPINTYTRHE-ELNQKLS 108
EE K E ST +ND D +E+V + +Q + ED + T +R E + ++LS
Sbjct: 461 EETKQKE-STGLARTNDKDAGEELVETAKKLEQ-ATKEAEDAKALATASRDELRMAKELS 518
Query: 109 IKVEGGQSEMSVNAGTRADEADLREANVDNVSNADATDAGINVKTEHFTYGDFNKDCPKS 168
+ + G S + E + A+ + ++ A ++ F + N P+S
Sbjct: 519 EQAKRGMSTIESRLVEAKKEMEAARAS-EKLALAAIKALQETESSQRFE--EINNS-PRS 574
Query: 169 QLVIKQEYDDIYSEGVSQSSDCSIKILSVGTLKDELKRQECGIPDYSDAVKLE 221
++ +EY ++ + + + + ++ + + + K +E I + + V E
Sbjct: 575 IIISVEEYYELSKQALESEEEANTRLSEIVSQIEVAKEEESRILEKLEEVNRE 627
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 29.9 bits (64), Expect = 7.4
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 7/136 (5%)
Query: 405 DTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDK 464
DT ++ + K K +S SLK GK +K E K+ K+D I+ K T
Sbjct: 775 DTHPEKRSPTEKPSLKKRGRKSNASSSLKDLSGKTQKKTS-EKKL-KLDSHMISSKATQP 832
Query: 465 EGYVCICGDVFRRRIRMETCMRSHNTDPDVSHV-----KCTTCSKNFNSKEELAFHRKRV 519
G + + + + ++ +T H KC+T +K+ +
Sbjct: 833 HGNGILTAGLNQGGDKQDSRNNRKSTVGKDDHTMQVIEKCSTINKSSSGGSAHLRRCNGS 892
Query: 520 HRKRFPCKFCPTDYDT 535
K+F C FC DT
Sbjct: 893 LTKKFTCAFCQCSEDT 908
>At3g53510.1 68416.m05908 ABC transporter family protein breast
cancer resistance protein (BCRP), Homo sapiens,
EMBL:AF098951
Length = 739
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 432 LKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDKEGYVCICGDVFRRRIRMET 483
L SS+ KKKK A ++ ++++ + A+ EG+ + G RRR+ + T
Sbjct: 213 LPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGE-RRRVSIGT 263
>At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A)
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA putative histone deacetylase (HD2A)
GI:11066134
Length = 245
Score = 29.9 bits (64), Expect = 7.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 486 RSHNTDP-DVSHVKCTTCSKNFNSKEELAFHRKRVH 520
++ N P S V C +C K FNS L H K H
Sbjct: 206 KAANQSPKSASQVSCGSCKKTFNSGNALESHNKAKH 241
>At3g23370.1 68416.m02947 expressed protein ; expression supported
by MPSS
Length = 717
Score = 29.9 bits (64), Expect = 7.4
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 177 DDIYSEGVSQSSDCSIKILSVGTLKDELKRQECGIPDYSDAVKLEATGDDFTSFDYPNYD 236
++I SE SQS KI ++K+E E G D S +V +E +S +
Sbjct: 31 EEIGSEDASQSVAADNKICITSSIKEESFVSEMGSQDASQSVAVENKNCISSSIKEESSV 90
Query: 237 DSMDSNEAA-AFCRVETCLQEDGQRIERNQI 266
M S +A+ + +E C + + + +++
Sbjct: 91 SEMGSQDASQSVAGIEACGKRESITVSNDRL 121
>At3g13010.1 68416.m01621 hAT dimerisation domain-containing protein
contains Pfam profile PF04937: Protein of unknown
function (DUF 659), weak hit to PF05699: hAT family
dimerisation domain
Length = 572
Score = 29.9 bits (64), Expect = 7.4
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 493 DVSHVKCTTCSKNFNSKEELAFHRKRVHRKRFPCKFCP 530
D + V+CT C K N L +H V + PC P
Sbjct: 17 DGARVQCTFCDKRMNDFNRLKYHLGNVCKDVTPCSQVP 54
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 29.9 bits (64), Expect = 7.4
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 659 AETHNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVH-HSVEVE-CAPPEEAGVM-----C 711
++ H D + ++ C+ C + F S + L HR H S +E APP V C
Sbjct: 22 SKAHQNDTKSRV-FACKTCNKEFPSFQALGGHRASHRRSAALEGHAPPSPKRVKPVKHEC 80
Query: 712 VECRKMCKDMEALTSHMRLH 731
C +AL HMR H
Sbjct: 81 PICGAEFAVGQALGGHMRKH 100
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 405 DTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTD 463
+T EK+ +S + K K + + +K +S K+K+N IE K E E EK+T+
Sbjct: 564 ETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIE-KEESASQEETKEKETE 621
>At1g32490.1 68414.m04009 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1044
Score = 29.9 bits (64), Expect = 7.4
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 234 NYDDSMDSNEAAAFCRVETCLQEDGQRIERN-QIYDDKQDLYRVIKEEEHLTVT-DTHII 291
NY+D+MD+ + + +T L E+ Q + R+ IY + L + ++E + L + DT
Sbjct: 374 NYEDAMDAKQKSQDLAEKTAL-EELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTG-- 430
Query: 292 SNKLTNTSLYANPYDVLIKSKKG 314
S K T Y + + K G
Sbjct: 431 SGKTTQIPQYLHEAGYTKRGKVG 453
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 487 SHNTDPDVSHVKCTTCSKNFNSKEELAFHRKRVHRK 522
S + D KCT C K+F+S + L H K HRK
Sbjct: 87 SRASPSDHRDYKCTVCGKSFSSYQALGGH-KTSHRK 121
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 29.5 bits (63), Expect = 9.8
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 654 LALHQAET-HNPDLREQLQIQCEDCRRVFVSHKGLQSHRRVHHSVEVECAPPEEAGVMCV 712
+A+ + ET +NP R +I E S + L R+ +V + + C
Sbjct: 26 VAVEEKETINNPKQRSPQEIVSERTNLEMPSFR-LSFFRKKRDTVLIHPPKDNKISHTCR 84
Query: 713 ECRKMCKDMEALTSHMRLHSPERK 736
C++ K AL HM+ H ER+
Sbjct: 85 FCKRNFKSCFALGGHMKCHKKERE 108
>At5g51795.1 68418.m06422 Kin17 DNA-binding protein-related
Length = 347
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 760 TGDMKYVCFICEYQCTSENRLKLHKRSAKHQSMKEYL 796
T V +CE QC EN K H S HQ + L
Sbjct: 37 TSKASMVFQMCEKQCRDENGFKCHCMSESHQRQMQVL 73
>At5g45030.1 68418.m05521 expressed protein
Length = 607
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 308 LIKSKKGLVMEIRPMSGRNFGMKSGNPEEILPTIDNYDDYEAFQLNSITGDVASLEQEAY 367
+++S G+ R +G NF + N +++L DN + + FQ+ + VA +E+ +
Sbjct: 482 VVESSPGVCNISRCKTGENFEPINLNVQQVLIEDDNSNIHPEFQIEDVLESVAVIEEHQF 541
>At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7)
identical to COP1-Interacting Protein 7 (CIP7)
GI:3327868 from [Arabidopsis thaliana]
Length = 1058
Score = 29.5 bits (63), Expect = 9.8
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 406 TIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKIDIEPIAEKKTDKE 465
T+ K K+S+K +K QSK L+SS ++ AV T ++ +P+ ++ +
Sbjct: 800 TVTKSVKSSIKNEKTPEAAQSKAKPVLRSS--TIERLAVARTAPKEPQQKPVIKRTSKPS 857
Query: 466 GY 467
GY
Sbjct: 858 GY 859
>At4g14700.1 68417.m02259 replication control protein, putative
similar to origin recognition complex subunit 1
(Replication control protein 1) [Homo sapiens]
SWISS-PROT:Q13415
Length = 809
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 647 QFHEADKLALHQAETHNPDLREQLQIQCEDCRRVFVSH 684
+F D + + + E NPD E+ + EDC+ F SH
Sbjct: 136 EFEIGDDVYVKRTEDANPDEEEEEDPEIEDCQICFKSH 173
>At4g01930.1 68417.m00257 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 29.5 bits (63), Expect = 9.8
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 569 CFMCNNSFKELPQLKCHVMEDHVEPYSCRYCRAAIPNIIDFAKHIKSFHPEVEGQSLLDV 628
C +C S K L C + +V Y +Y + +I + H + + + + +D
Sbjct: 81 CNLCGISIKSL-FYNCEICNFNVHMYCAKYPPPQVIDISETHHHKLNLYKK---PNYIDC 136
Query: 629 LEAFSKLVQ--AWKCEECGMQFH 649
+ KL ++KC+EC + FH
Sbjct: 137 GDKCGKLSYEFSYKCQECDLAFH 159
>At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein
weak similarity to S-locus protein 4 (GI:6069478)
[Brassica rapa]; weak similarity to Pre-mRNA cleavage
complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913)
[Homo sapiens]; contains Prosite PS00028: Zinc finger,
C2H2 type, domain
Length = 828
Score = 29.5 bits (63), Expect = 9.8
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 382 HVCPKCGNAYASETCLKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDS-LKSSIGKKK 440
H+C C + L RH+++HD +K+ + S K ++ KVD+ + + G+ +
Sbjct: 679 HLCTSCSVRLKQKEELDRHMELHD--KKKLELSGTNSKCRV--WFPKVDNWIAAKAGELE 734
Query: 441 KNAVIETKVEKIDIEPIAEKKTDKEGYVCI-CGDVF 475
+ IE D+ CI CG+VF
Sbjct: 735 PEYEEVLSEPESAIEDCQAVAADETQCACILCGEVF 770
>At2g31750.1 68415.m03877 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 456
Score = 29.5 bits (63), Expect = 9.8
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 7 ANQDENASQNKDLGKINIKSYIELEGNTIGLLKQEEIPACVIEACEEL--KMNEISTDDT 64
++Q NA +D+ K+ ++ ++ + N G + +EEI CV E E++ K EI +
Sbjct: 372 SDQPTNAKFIEDVWKVGVR--VKADQN--GFVPKEEIVRCVGEVMEDMSEKGKEIRKNAR 427
Query: 65 ESNDVDDEIVTDGPETDQIVN 85
+ E ++DG +D+ ++
Sbjct: 428 RLMEFAREALSDGGNSDKNID 448
>At2g19090.1 68415.m02229 expressed protein contains Pfam profiles:
PF04782 protein of unknown function (DUF632), PF04783
protein of unknown function (DUF630); expression
supported by MPSS
Length = 814
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 41 EEIPACVIEAC--EELKMNEISTDDTESNDVDDEIVTD-GPETD 81
EE V ++C EE+K+ ++ D+ E D DD+ TD G ET+
Sbjct: 279 EENRGKVDKSCCNEEVKVEDVDEDEDEDGDEDDDEFTDSGCETE 322
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 29.5 bits (63), Expect = 9.8
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 394 ETCLKRHLKVHDTIEKQTKTSVKRQKAKIDNQSKKVDSLKSSIGKKKKNAVIETKVEKID 453
E C ++ K D E +TK ++K K + +K +K KKK+N +ET+V D
Sbjct: 342 EVC-EKETKDKDDDEGETKQKKNKKKEKKSEKGEK--DVKED--KKKENP-LETEVMSRD 395
Query: 454 I---EPIAEKKTDKE 465
I EP AEKK + +
Sbjct: 396 IKLEEPEAEKKEEDD 410
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 497 VKCTTCSKNFNSKEELAFHRKRVHRKRFPCKFCPTDYDTGKDLFEH-LKIHRQ 548
V C C + F+ ++ L H+K H F C C T + H L++H++
Sbjct: 12 VWCYYCDREFDDEKILVQHQKAKH---FKCHVCHKKLSTASGMVIHVLQVHKE 61
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.5 bits (63), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 522 KRFPCKFCPTDYDTGKDLFEHLKIH 546
++F CKFC + GK L H++ H
Sbjct: 7 RKFVCKFCSKRFPCGKSLGGHIRTH 31
>At1g09570.1 68414.m01073 phytochrome A (PHYA) identical to SP|P14712
Phytochrome A {Arabidopsis thaliana}
Length = 1122
Score = 29.5 bits (63), Expect = 9.8
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 47 VIEACEELKMNEISTDDTESNDVDDEIVTDGPETDQIVNRTTEDVTPINTYTRHEELNQK 106
+IE C +L+M E + ++ + ++ ++ +I N T E+V Y L Q
Sbjct: 956 IIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQV 1015
Query: 107 L------SIKVEGGQSEMSVNAGTRADEADLREANVDNVS-NADATDAGI 149
L ++ +++V+A R D+ R ++ N+ T AGI
Sbjct: 1016 LADFMLMAVNFTPSGGQLTVSASLRKDQLG-RSVHLANLEIRLTHTGAGI 1064
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.132 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,171,470
Number of Sequences: 28952
Number of extensions: 904024
Number of successful extensions: 3625
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 3393
Number of HSP's gapped (non-prelim): 279
length of query: 848
length of database: 12,070,560
effective HSP length: 87
effective length of query: 761
effective length of database: 9,551,736
effective search space: 7268871096
effective search space used: 7268871096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -