Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000084-TA|BGIBMGA000084-PA|IPR007012|Poly(A) polymerase,
central region, IPR002934|DNA polymerase, beta-like region,
IPR007010|Poly(A) polymerase, RNA-binding region, IPR011068|Poly(A)
polymerase, C-terminal-like
(596 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113747-1|AAI13748.1| 736|Homo sapiens poly(A) polymerase gamm... 676 0.0
BC111701-1|AAI11702.1| 736|Homo sapiens poly(A) polymerase gamm... 676 0.0
AK023544-1|BAB14604.1| 675|Homo sapiens protein ( Homo sapiens ... 676 0.0
AJ308101-1|CAC59751.1| 736|Homo sapiens poly(A) polymerase gamm... 676 0.0
AF312211-1|AAK83701.1| 736|Homo sapiens neo-poly(A) polymerase ... 676 0.0
AY029162-1|AAK31791.1| 736|Homo sapiens SRP RNA 3' adenylating ... 671 0.0
BC110906-1|AAI10907.1| 506|Homo sapiens PAPOLG protein protein. 667 0.0
AK021867-1|BAB13919.1| 501|Homo sapiens protein ( Homo sapiens ... 665 0.0
BC036014-1|AAH36014.1| 745|Homo sapiens poly(A) polymerase alph... 665 0.0
BC016738-1|AAH16738.1| 496|Homo sapiens Unknown (protein for IM... 650 0.0
AC012498-1|AAY14832.1| 465|Homo sapiens unknown protein. 619 e-177
AF218840-1|AAF81013.1| 636|Homo sapiens testis-specific poly(A)... 605 e-172
AC092610-3|AAS07561.1| 636|Homo sapiens unknown protein. 605 e-172
BC036653-1|AAH36653.2| 637|Homo sapiens poly(A) polymerase beta... 603 e-172
AB284524-1|BAF41975.1| 637|Homo sapiens testis-specific poly(A)... 597 e-170
BC000927-1|AAH00927.1| 285|Homo sapiens PAPOLA protein protein. 404 e-112
AB209304-1|BAD92541.1| 382|Homo sapiens poly(A) polymerase gamm... 192 3e-48
AK024249-1|BAB14858.1| 302|Homo sapiens protein ( Homo sapiens ... 96 4e-19
AK023034-1|BAB14368.1| 302|Homo sapiens protein ( Homo sapiens ... 96 4e-19
AC011245-1|AAY14677.1| 270|Homo sapiens unknown protein. 61 1e-08
X15786-1|CAA33787.1| 899|Homo sapiens retII protein. 32 6.6
X12949-1|CAA31408.1| 860|Homo sapiens protein ( Human ret proto... 32 6.6
M31213-1|AAA36524.1| 503|Homo sapiens protein ( Human papillary... 32 6.6
DQ104207-1|AAZ57203.1| 776|Homo sapiens HOOK3-RET fusion protei... 32 6.6
AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16 p... 32 6.6
AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens ... 32 6.6
AK124565-1|BAC85888.1| 1163|Homo sapiens protein ( Homo sapiens ... 32 6.6
AJ243297-1|CAB46483.1| 1091|Homo sapiens RET tyrosine kinase rec... 32 6.6
>BC113747-1|AAI13748.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 676 bits (1671), Expect = 0.0
Identities = 336/589 (57%), Positives = 424/589 (71%), Gaps = 44/589 (7%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRK 553
LTYDI SFT V QA N NML+EG+ IEA HV++KQLH YL A +L ++++ + + +
Sbjct: 455 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNR 514
Query: 554 PDGALTHPPKKSKRLS------ESSNGSANGTAETPKADASTSSTIACT 596
G L +SKRLS +SS + NGT A S S ++ T
Sbjct: 515 SSGGL-----QSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGET 558
>BC111701-1|AAI11702.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 676 bits (1671), Expect = 0.0
Identities = 336/589 (57%), Positives = 424/589 (71%), Gaps = 44/589 (7%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRK 553
LTYDI SFT V QA N NML+EG+ IEA HV++KQLH YL A +L ++++ + + +
Sbjct: 455 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNR 514
Query: 554 PDGALTHPPKKSKRLS------ESSNGSANGTAETPKADASTSSTIACT 596
G L +SKRLS +SS + NGT A S S ++ T
Sbjct: 515 SSGGL-----QSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGET 558
>AK023544-1|BAB14604.1| 675|Homo sapiens protein ( Homo sapiens
cDNA FLJ13482 fis, clone PLACE1003885, moderately
similar to POLY(A) POLYMERASE (EC 2.7.7.19). ).
Length = 675
Score = 676 bits (1671), Expect = 0.0
Identities = 336/589 (57%), Positives = 424/589 (71%), Gaps = 44/589 (7%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 1 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 60
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 61 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 120
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 121 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 180
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 181 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 240
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 241 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 300
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 301 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 360
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 361 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 417
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 418 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 451
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRK 553
LTYDI SFT V QA N NML+EG+ IEA HV++KQLH YL A +L ++++ + + +
Sbjct: 452 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNR 511
Query: 554 PDGALTHPPKKSKRLS------ESSNGSANGTAETPKADASTSSTIACT 596
G L +SKRLS +SS + NGT A S S ++ T
Sbjct: 512 SSGGL-----QSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGET 555
>AJ308101-1|CAC59751.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 676 bits (1671), Expect = 0.0
Identities = 336/589 (57%), Positives = 424/589 (71%), Gaps = 44/589 (7%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRK 553
LTYDI SFT V QA N NML+EG+ IEA HV++KQLH YL A +L ++++ + + +
Sbjct: 455 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNR 514
Query: 554 PDGALTHPPKKSKRLS------ESSNGSANGTAETPKADASTSSTIACT 596
G L +SKRLS +SS + NGT A S S ++ T
Sbjct: 515 SSGGL-----QSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGET 558
>AF312211-1|AAK83701.1| 736|Homo sapiens neo-poly(A) polymerase
protein.
Length = 736
Score = 676 bits (1671), Expect = 0.0
Identities = 336/589 (57%), Positives = 424/589 (71%), Gaps = 44/589 (7%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRK 553
LTYDI SFT V QA N NML+EG+ IEA HV++KQLH YL A +L ++++ + + +
Sbjct: 455 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNR 514
Query: 554 PDGALTHPPKKSKRLS------ESSNGSANGTAETPKADASTSSTIACT 596
G L +SKRLS +SS + NGT A S S ++ T
Sbjct: 515 SSGGL-----QSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGET 558
>AY029162-1|AAK31791.1| 736|Homo sapiens SRP RNA 3' adenylating
enzyme/pap2 protein.
Length = 736
Score = 671 bits (1659), Expect = 0.0
Identities = 334/589 (56%), Positives = 423/589 (71%), Gaps = 44/589 (7%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A P+ ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPEEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQ + NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRK 553
LTYDI SFT V QA N NML+EG+ IEA HV++KQLH YL A +L ++++ + + +
Sbjct: 455 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNR 514
Query: 554 PDGALTHPPKKSKRLS------ESSNGSANGTAETPKADASTSSTIACT 596
G L +SKRLS +SS + NGT A S S ++ T
Sbjct: 515 SSGGL-----QSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGET 558
>BC110906-1|AAI10907.1| 506|Homo sapiens PAPOLG protein protein.
Length = 506
Score = 667 bits (1647), Expect = 0.0
Identities = 320/532 (60%), Positives = 400/532 (75%), Gaps = 33/532 (6%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRER 545
LTYDI SFT V QA N NML+EG+ IEA HV++KQLH YL A +L ++++
Sbjct: 455 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKK 506
>AK021867-1|BAB13919.1| 501|Homo sapiens protein ( Homo sapiens
cDNA FLJ11805 fis, clone HEMBA1006278, moderately
similar to POLY(A) POLYMERASE (EC 2.7.7.19). ).
Length = 501
Score = 665 bits (1643), Expect = 0.0
Identities = 320/527 (60%), Positives = 396/527 (75%), Gaps = 33/527 (6%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLL 540
LTYDI SFT V QA N NML+EG+ IEA HV++KQLH YL A +L
Sbjct: 455 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEIL 501
>BC036014-1|AAH36014.1| 745|Homo sapiens poly(A) polymerase alpha
protein.
Length = 745
Score = 665 bits (1642), Expect = 0.0
Identities = 328/533 (61%), Positives = 396/533 (74%), Gaps = 33/533 (6%)
Query: 17 PIKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRME 76
P+ Q Q K G+TS IS A PK D T L +L PFGVFE E E+ R+
Sbjct: 4 PVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRIL 63
Query: 77 VLGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRH 136
+LG L+ LV++WIR+ S KN+P SV + VGG I+TFGSYRLGVH +GADIDALCVAPRH
Sbjct: 64 ILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRH 123
Query: 137 IERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFD 196
++R D+F +FYD LK Q +VKDLRAVE+AFVPVIK+ FDGIEID+LFARLAL+ IP+ D
Sbjct: 124 VDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLD 183
Query: 197 LRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGY 256
LRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRLTLRAIKLWAKRH IYSN LG+
Sbjct: 184 LRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGF 243
Query: 257 LGGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPR 316
LGGVSWAMLVARTCQLYPNA+ +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPR
Sbjct: 244 LGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
Query: 317 VNVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFE 376
VN +DRYHLMPIITPAYPQQNST+NVS STR +++EEF+ GLA+TDEI+L K W +LFE
Sbjct: 304 VNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFE 363
Query: 377 APNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNS 436
APNFF +YKH+IVLLAS+ + +L+W GL+ESKIR L+ +LE+N+ IT+AHVNP+ S
Sbjct: 364 APNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ---S 420
Query: 437 VPLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNV 492
P P+E DK E +MW IGLVF+KT N++V
Sbjct: 421 FPA----------------PKENP------DKEEFR----TMWVIGLVFKKTENSENLSV 454
Query: 493 DLTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRER 545
DLTYDI SFT V QA N+ M + I A HV+RKQLHQ L +L ++++
Sbjct: 455 DLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKK 507
>BC016738-1|AAH16738.1| 496|Homo sapiens Unknown (protein for
IMAGE:4106370) protein.
Length = 496
Score = 650 bits (1605), Expect = 0.0
Identities = 313/517 (60%), Positives = 389/517 (75%), Gaps = 33/517 (6%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQ 530
LTYDI SFT V QA N NML+EG+ IEA HV++K+
Sbjct: 455 LTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKK 491
>AC012498-1|AAY14832.1| 465|Homo sapiens unknown protein.
Length = 465
Score = 619 bits (1530), Expect = e-177
Identities = 298/489 (60%), Positives = 369/489 (75%), Gaps = 33/489 (6%)
Query: 18 IKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEV 77
+ A +Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ V
Sbjct: 4 MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63
Query: 78 LGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHI 137
LG L+ LV++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+
Sbjct: 64 LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123
Query: 138 ERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDL 197
ER D+F +F++ LK Q +++LRAVEDAFVPVIK FDGIEIDL+FARLA++ I D+ DL
Sbjct: 124 ERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDL 183
Query: 198 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYL 257
RDD L++LD +C+RSLNGCRVTDEIL LVPN FRLTLRA+KLWAKR GIYSN LG+L
Sbjct: 184 RDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFL 243
Query: 258 GGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRV 317
GGVSWAMLVARTCQLYPNA +TLVHKFFLVFS+W+WP PVLLKQP+ NL PVWDPRV
Sbjct: 244 GGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRV 303
Query: 318 NVADRYHLMPIITPAYPQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEA 377
N +DRYHLMPIITPAYPQQNST+NVS STRT+++EEF+ GLAVTDEI+ GK W +L E
Sbjct: 304 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEP 363
Query: 378 PNFFSRYKHFIVLLASSASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSV 437
PNFF +Y+H+IVL AS+++ ++ L+W GL+ESKIR L+ LERN+ IT+AHVNP+ +
Sbjct: 364 PNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF--- 420
Query: 438 PLNTNNGQPLALPPGSTIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKT----NVNVD 493
PG + E +K++ N+ SMWF+G++F + +VN+D
Sbjct: 421 -------------PG-------NKEHHKDN------NYVSMWFLGIIFRRVENAESVNID 454
Query: 494 LTYDISSFT 502
LTYDI SFT
Sbjct: 455 LTYDIQSFT 463
>AF218840-1|AAF81013.1| 636|Homo sapiens testis-specific poly(A)
polymerase protein.
Length = 636
Score = 605 bits (1494), Expect = e-172
Identities = 304/522 (58%), Positives = 375/522 (71%), Gaps = 25/522 (4%)
Query: 34 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 93
G++S IS A PK D T L +L PFGVFE E E+ R+ VL L+ LV++WIR+ S
Sbjct: 21 GVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 80
Query: 94 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 153
K++P SV + VGG I+TFGSYRLGVH +GADIDALCVAP H++R D+F +FY LK Q
Sbjct: 81 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQ 140
Query: 154 PQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQKCVRS 213
+VKDLRAVE+AFVPVIK+ FDGIEID+LFARLAL+ IP+ DLRDD LLKNLD +C+RS
Sbjct: 141 EEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRS 200
Query: 214 LNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVARTCQLY 273
LNGCRVTDEIL LVPNI+NFRLTLRAIKLWAK H IYSN LG+LGGVSWAMLVARTCQLY
Sbjct: 201 LNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLY 260
Query: 274 PNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRVNVADRYHLMPIITPAY 333
PNA+ +TLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPAY
Sbjct: 261 PNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAY 320
Query: 334 PQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEAPNFFSRYKHFIVLLAS 393
PQQNST+NVS STR +++EEF+ GLA+T EI+L K W +LFEAP+FF +YKH+IVLLAS
Sbjct: 321 PQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLAS 380
Query: 394 SASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSVPLNTNNGQPLALPPGS 453
+++ L+W GL+ESKIR L+ +LE+N+ IT+AHVNP+ S P N
Sbjct: 381 ASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ---SFPAPKENPDMEEFRTMW 437
Query: 454 TIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKTNVNVDLTYDISSFTKAVLYQAENTN 513
I L K D E++ I L ++ I SFT V QA N+
Sbjct: 438 VI----GLGLKKPDNSEIL-------SIDLTYD-----------IQSFTDTVYRQAVNSK 475
Query: 514 MLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRKPD 555
M G+ I A H+RRK+LHQ L +L ++ ++ +R D
Sbjct: 476 MFEMGMKITAMHLRRKELHQLLPHHVLQDKKAHSTEGRRLTD 517
>AC092610-3|AAS07561.1| 636|Homo sapiens unknown protein.
Length = 636
Score = 605 bits (1494), Expect = e-172
Identities = 304/522 (58%), Positives = 375/522 (71%), Gaps = 25/522 (4%)
Query: 34 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 93
G++S IS A PK D T L +L PFGVFE E E+ R+ VL L+ LV++WIR+ S
Sbjct: 21 GVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 80
Query: 94 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 153
K++P SV + VGG I+TFGSYRLGVH +GADIDALCVAP H++R D+F +FY LK Q
Sbjct: 81 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQ 140
Query: 154 PQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQKCVRS 213
+VKDLRAVE+AFVPVIK+ FDGIEID+LFARLAL+ IP+ DLRDD LLKNLD +C+RS
Sbjct: 141 EEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRS 200
Query: 214 LNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVARTCQLY 273
LNGCRVTDEIL LVPNI+NFRLTLRAIKLWAK H IYSN LG+LGGVSWAMLVARTCQLY
Sbjct: 201 LNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLY 260
Query: 274 PNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRVNVADRYHLMPIITPAY 333
PNA+ +TLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPAY
Sbjct: 261 PNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAY 320
Query: 334 PQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEAPNFFSRYKHFIVLLAS 393
PQQNST+NVS STR +++EEF+ GLA+T EI+L K W +LFEAP+FF +YKH+IVLLAS
Sbjct: 321 PQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLAS 380
Query: 394 SASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSVPLNTNNGQPLALPPGS 453
+++ L+W GL+ESKIR L+ +LE+N+ IT+AHVNP+ S P N
Sbjct: 381 ASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ---SFPAPKENPDMEEFRTMW 437
Query: 454 TIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKTNVNVDLTYDISSFTKAVLYQAENTN 513
I L K D E++ I L ++ I SFT V QA N+
Sbjct: 438 VI----GLGLKKPDNSEIL-------SIDLTYD-----------IQSFTDTVYRQAVNSK 475
Query: 514 MLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRKPD 555
M G+ I A H+RRK+LHQ L +L ++ ++ +R D
Sbjct: 476 MFEMGMKITAMHLRRKELHQLLPHHVLQDKKAHSTEGRRLTD 517
>BC036653-1|AAH36653.2| 637|Homo sapiens poly(A) polymerase beta
(testis specific) protein.
Length = 637
Score = 603 bits (1490), Expect = e-172
Identities = 303/522 (58%), Positives = 375/522 (71%), Gaps = 25/522 (4%)
Query: 34 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 93
G++S IS A PK D T L +L PFGVFE E E+ R+ VL L+ LV++WIR+ S
Sbjct: 22 GVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREIS 81
Query: 94 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 153
K++P SV + VGG I+TFGSYRLGVH +GADIDALCVAP H++R D+F +FY LK Q
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQ 141
Query: 154 PQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQKCVRS 213
+VKDLRAV++AFVPVIK+ FDGIEID+LFARLAL+ IP+ DLRDD LLKNLD +C+RS
Sbjct: 142 EEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRS 201
Query: 214 LNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVARTCQLY 273
LNGCRVTDEIL LVPNI+NFRLTLRAIKLWAK H IYSN LG+LGGVSWAMLVARTCQLY
Sbjct: 202 LNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLY 261
Query: 274 PNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRVNVADRYHLMPIITPAY 333
PNA+ +TLV KFFLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPAY
Sbjct: 262 PNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAY 321
Query: 334 PQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEAPNFFSRYKHFIVLLAS 393
PQQNST+NVS STR +++EEF+ GLA+T EI+L K W +LFEAP+FF +YKH+IVLLAS
Sbjct: 322 PQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLAS 381
Query: 394 SASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSVPLNTNNGQPLALPPGS 453
+++ L+W GL+ESKIR L+ +LE+N+ IT+AHVNP+ S P N
Sbjct: 382 ASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ---SFPAPKENPDMEEFRTMW 438
Query: 454 TIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKTNVNVDLTYDISSFTKAVLYQAENTN 513
I L K D E++ I L ++ I SFT V QA N+
Sbjct: 439 VI----GLGLKKPDNSEIL-------SIDLTYD-----------IQSFTDTVYRQAVNSK 476
Query: 514 MLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRKPD 555
M G+ I A H+RRK+LHQ L +L ++ ++ +R D
Sbjct: 477 MFEMGMKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTD 518
>AB284524-1|BAF41975.1| 637|Homo sapiens testis-specific poly(A)
polymerase protein.
Length = 637
Score = 597 bits (1474), Expect = e-170
Identities = 301/522 (57%), Positives = 373/522 (71%), Gaps = 25/522 (4%)
Query: 34 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 93
G++S IS A PK D T L +L PFGVFE E E+ R+ VL L+ LV++WIR+ S
Sbjct: 22 GVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 94 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 153
K++P SV + VGG I+TFGSYRLGVH +GADIDALCVAP H++R D+F +FY LK Q
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQ 141
Query: 154 PQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQKCVRS 213
+VKDLRAVE+AFVPVIK+ FDGIEID+LFARLAL+ IP+ DLRDD LLKNLD +C+RS
Sbjct: 142 EEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRS 201
Query: 214 LNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVARTCQLY 273
LNGCRVTDEIL LVPNI+NFRLTLRAIKLWAK H IYSN LG+ GGVSWAMLVARTCQLY
Sbjct: 202 LNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTCQLY 261
Query: 274 PNALPATLVHKFFLVFSQWKWPQPVLLKQPDHVNLGFPVWDPRVNVADRYHLMPIITPAY 333
PNA+ +TLV K+FLVFS+W+WP PVLLK+P+ NL PVWDPRVN +DRYHLMPIITPAY
Sbjct: 262 PNAVASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAY 321
Query: 334 PQQNSTFNVSASTRTIIMEEFRLGLAVTDEIMLGKCGWERLFEAPNFFSRYKHFIVLLAS 393
PQQNST+NVS STR +++E F+ GLA+T EI+L K W +LFEAP+FF +YKH+IVLLAS
Sbjct: 322 PQQNSTYNVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKYKHYIVLLAS 381
Query: 394 SASADDQLQWCGLIESKIRHLIATLERNQHITIAHVNPECYNSVPLNTNNGQPLALPPGS 453
+++ L+W GL+ESKIR L+ +LE+N+ IT+AHVNP+ S P N
Sbjct: 382 ASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ---SFPAPKENPDMEEFRTMW 438
Query: 454 TIPRETSPELNKNDKGEVVVNHCSMWFIGLVFEKTNVNVDLTYDISSFTKAVLYQAENTN 513
I L K D E++ I L ++ I SFT V QA N+
Sbjct: 439 VI----GLGLKKPDNSEIL-------SIDLTYD-----------IQSFTDTVYRQAVNSK 476
Query: 514 MLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRKPD 555
M G+ I A H+RRK+LHQ L +L ++ ++ +R D
Sbjct: 477 MFEMGMKITAMHLRRKELHQLLPHHVLQDKKAHSTEGRRLTD 518
>BC000927-1|AAH00927.1| 285|Homo sapiens PAPOLA protein protein.
Length = 285
Score = 404 bits (995), Expect = e-112
Identities = 190/276 (68%), Positives = 221/276 (80%)
Query: 17 PIKATNEYQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRME 76
P+ Q Q K G+TS IS A PK D T L +L PFGVFE E E+ R+
Sbjct: 4 PVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRIL 63
Query: 77 VLGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRH 136
+LG L+ LV++WIR+ S KN+P SV + VGG I+TFGSYRLGVH +GADIDALCVAPRH
Sbjct: 64 ILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRH 123
Query: 137 IERCDYFLTFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFD 196
++R D+F +FYD LK Q +VKDLRAVE+AFVPVIK+ FDGIEID+LFARLAL+ IP+ D
Sbjct: 124 VDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLD 183
Query: 197 LRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAIKLWAKRHGIYSNTLGY 256
LRDD LLKNLD +C+RSLNGCRVTDEIL LVPNI+NFRLTLRAIKLWAKRH IYSN LG+
Sbjct: 184 LRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGF 243
Query: 257 LGGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQW 292
LGGVSWAMLVARTCQLYPNA+ +TLVHKFFLVFS+W
Sbjct: 244 LGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
>AB209304-1|BAD92541.1| 382|Homo sapiens poly(A) polymerase gamma
variant protein.
Length = 382
Score = 192 bits (468), Expect = 3e-48
Identities = 110/260 (42%), Positives = 159/260 (61%), Gaps = 44/260 (16%)
Query: 347 RTIIMEEFRLGLAVTDEIMLGKCGWERLFEAPNFFSRYKHFIVLLASSASADDQLQWCGL 406
RT+++EEF+ GLAVTDEI+ GK W +L E PNFF +Y+H+IVL AS+++ ++ L+W GL
Sbjct: 1 RTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 407 IESKIRHLIATLERNQHITIAHVNPECYNSVPLNTNNGQPLALPPGSTIPRETSPELNKN 466
+ESKIR L+ LERN+ IT+AHVNP+ + PG + E +K+
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSF----------------PG-------NKEHHKD 97
Query: 467 DKGEVVVNHCSMWFIGLVFEKT----NVNVDLTYDISSFTKAVLYQAENTNMLREGLTIE 522
+ N+ SMWF+G++F + +VN+DLTYDI SFT V QA N NML+EG+ IE
Sbjct: 98 N------NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIE 151
Query: 523 ARHVRRKQLHQYLSASLLCRRERTASGNKRKPDGALTHPPKKSKRLS------ESSNGSA 576
A HV++KQLH YL A +L ++++ + + + G L +SKRLS +SS +
Sbjct: 152 ATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGL-----QSKRLSLDSSCLDSSRDTD 206
Query: 577 NGTAETPKADASTSSTIACT 596
NGT A S S ++ T
Sbjct: 207 NGTPFNSPASKSDSPSVGET 226
>AK024249-1|BAB14858.1| 302|Homo sapiens protein ( Homo sapiens
cDNA FLJ14187 fis, clone NT2RP2005776, weakly similar to
POLY(A) POLYMERASE TYPE 2 (EC 2.7.7.19). ).
Length = 302
Score = 95.9 bits (228), Expect = 4e-19
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 15/129 (11%)
Query: 478 MWFIGLVFEKT----NVNVDLTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQ 533
MWF+G++F + +VN+DLTYDI SFT V QA N NML+EG+ IEA HV++KQLH
Sbjct: 1 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMRIEATHVKKKQLHH 60
Query: 534 YLSASLLCRRERTASGNKRKPDGALTHPPKKSKRLS------ESSNGSANGTAETPKADA 587
YL A +L ++++ + + + G L +SKRLS +SS + NGT A
Sbjct: 61 YLPAEILQKKKKQSLSDVNRSSGGL-----QSKRLSLDSSCLDSSRDTDNGTPFNSPASK 115
Query: 588 STSSTIACT 596
S S ++ T
Sbjct: 116 SDSPSVGET 124
>AK023034-1|BAB14368.1| 302|Homo sapiens protein ( Homo sapiens
cDNA FLJ12972 fis, clone NT2RP2005942, weakly similar to
POLY(A) POLYMERASE (EC 2.7.7.19). ).
Length = 302
Score = 95.9 bits (228), Expect = 4e-19
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 15/129 (11%)
Query: 478 MWFIGLVFEKT----NVNVDLTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQLHQ 533
MWF+G++F + +VN+DLTYDI SFT V QA N NML+EG+ IEA HV++KQLH
Sbjct: 1 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 60
Query: 534 YLSASLLCRRERTASGNKRKPDGALTHPPKKSKRLS------ESSNGSANGTAETPKADA 587
YL A +L ++++ + + + G L +SKRLS +SS + NGT A
Sbjct: 61 YLPAEILQKKKKQSLSDVNRSSGGL-----QSKRLSLDSSCLDSSRDTDNGTPFNSPASK 115
Query: 588 STSSTIACT 596
S S ++ T
Sbjct: 116 SDSPSVGET 124
>AC011245-1|AAY14677.1| 270|Homo sapiens unknown protein.
Length = 270
Score = 60.9 bits (141), Expect = 1e-08
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
Query: 508 QAENTNMLREGLTIEARHVRRKQLHQYLSASLLCRRERTASGNKRKPDGALTHPPKKSKR 567
QA N NML+EG+ IEA HV++KQLH YL A +L ++++ + + + G L +SKR
Sbjct: 3 QANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGL-----QSKR 57
Query: 568 LS------ESSNGSANGTAETPKADASTSSTIACT 596
LS +SS + NGT A S S ++ T
Sbjct: 58 LSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGET 92
>X15786-1|CAA33787.1| 899|Homo sapiens retII protein.
Length = 899
Score = 31.9 bits (69), Expect = 6.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 274 PNALPATLVHKFFLVFSQWKWP--QPVLLKQPDHVNLGFPVWDPRVNVADRYHLMP 327
P ALP+T + S WP PV L + D N GFP + P +V + L P
Sbjct: 834 PRALPSTWIENKLYGMSDPNWPGESPVPLTRADGTNTGFPRY-PNDSVYANWMLSP 888
>X12949-1|CAA31408.1| 860|Homo sapiens protein ( Human ret
proto-oncogene mRNA for tyrosine kinase. ).
Length = 860
Score = 31.9 bits (69), Expect = 6.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 274 PNALPATLVHKFFLVFSQWKWP--QPVLLKQPDHVNLGFPVWDPRVNVADRYHLMP 327
P ALP+T + S WP PV L + D N GFP + P +V + L P
Sbjct: 795 PRALPSTWIENKLYGMSDPNWPGESPVPLTRADGTNTGFPRY-PNDSVYANWMLSP 849
>M31213-1|AAA36524.1| 503|Homo sapiens protein ( Human papillary
thyroid carcinoma-encoded protein mRNA, complete cds. ).
Length = 503
Score = 31.9 bits (69), Expect = 6.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 274 PNALPATLVHKFFLVFSQWKWP--QPVLLKQPDHVNLGFPVWDPRVNVADRYHLMP 327
P ALP+T + S WP PV L + D N GFP + P +V + L P
Sbjct: 438 PRALPSTWIENKLYGMSDPNWPGESPVPLTRADGTNTGFPRY-PNDSVYANWMLSP 492
>DQ104207-1|AAZ57203.1| 776|Homo sapiens HOOK3-RET fusion protein
protein.
Length = 776
Score = 31.9 bits (69), Expect = 6.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 274 PNALPATLVHKFFLVFSQWKWP--QPVLLKQPDHVNLGFPVWDPRVNVADRYHLMP 327
P ALP+T + S WP PV L + D N GFP + P +V + L P
Sbjct: 711 PRALPSTWIENKLYGMSDPNWPGESPVPLTRADGTNTGFPRY-PNDSVYANWMLSP 765
>AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16
precursor protein protein.
Length = 1332
Score = 31.9 bits (69), Expect = 6.6
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 472 VVNHCSMWFIGLVFEKTNVNVDLTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQL 531
+++HC + ++ + + D +AV ENT +E V+R +
Sbjct: 424 ILSHCDPGPVPIIVSR---HPDPQVSEQQLKEAVAQAVENTKFGKERHQWSLEGVKRLES 480
Query: 532 HQYLSASLLCRRERTASGNKRKPDGALTHPPKKSKRLSESSNGS-ANGTAETPKADASTS 590
+ +L RE+ ++ R+ + S +S S GS +G+AE P +D S
Sbjct: 481 SWHGRPTLEKEREKNSAPPHRRAQKVMIRSSSDSSYMSGSPGGSPGSGSAEKPSSDVDIS 540
Query: 591 S 591
+
Sbjct: 541 T 541
>AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens
cDNA FLJ16759 fis, clone BRACE3046450, highly similar
to Interleukin-16 precursor. ).
Length = 1331
Score = 31.9 bits (69), Expect = 6.6
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 472 VVNHCSMWFIGLVFEKTNVNVDLTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQL 531
+++HC + ++ + + D +AV ENT +E V+R +
Sbjct: 424 ILSHCDPGPVPIIVSR---HPDPQVSEQQLKEAVAQAVENTKFGKERHQWSLEGVKRLES 480
Query: 532 HQYLSASLLCRRERTASGNKRKPDGALTHPPKKSKRLSESSNGS-ANGTAETPKADASTS 590
+ +L RE+ ++ R+ + S +S S GS +G+AE P +D S
Sbjct: 481 SWHGRPTLEKEREKNSAPPHRRAQKVMIRSSSDSSYMSGSPGGSPGSGSAEKPSSDVDIS 540
Query: 591 S 591
+
Sbjct: 541 T 541
>AK124565-1|BAC85888.1| 1163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42574 fis, clone BRACE3008137, highly similar
to Interleukin-16 precursor. ).
Length = 1163
Score = 31.9 bits (69), Expect = 6.6
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 472 VVNHCSMWFIGLVFEKTNVNVDLTYDISSFTKAVLYQAENTNMLREGLTIEARHVRRKQL 531
+++HC + ++ + + D +AV ENT +E V+R +
Sbjct: 256 ILSHCDPGPVPIIVSR---HPDPQVSEQQLKEAVAQAVENTKFGKERHQWSLEGVKRLES 312
Query: 532 HQYLSASLLCRRERTASGNKRKPDGALTHPPKKSKRLSESSNGS-ANGTAETPKADASTS 590
+ +L RE+ ++ R+ + S +S S GS +G+AE P +D S
Sbjct: 313 SWHGRPTLEKEREKNSAPPHRRAQKVMIRSSSDSSYMSGSPGGSPGSGSAEKPSSDVDIS 372
Query: 591 S 591
+
Sbjct: 373 T 373
>AJ243297-1|CAB46483.1| 1091|Homo sapiens RET tyrosine kinase receptor
protein.
Length = 1091
Score = 31.9 bits (69), Expect = 6.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 274 PNALPATLVHKFFLVFSQWKWP--QPVLLKQPDHVNLGFPVWDPRVNVADRYHLMP 327
P ALP+T + S WP PV L + D N GFP + P +V + L P
Sbjct: 1026 PRALPSTWIENKLYGMSDPNWPGESPVPLTRADGTNTGFPRY-PNDSVYANWMLSP 1080
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.134 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,839,025
Number of Sequences: 224733
Number of extensions: 3980245
Number of successful extensions: 7545
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7492
Number of HSP's gapped (non-prelim): 47
length of query: 596
length of database: 73,234,838
effective HSP length: 94
effective length of query: 502
effective length of database: 52,109,936
effective search space: 26159187872
effective search space used: 26159187872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 68 (31.5 bits)
- SilkBase 1999-2023 -