Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000083-TA|BGIBMGA000083-PA|undefined
(1082 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 39 0.003
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 34 0.12
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 33 0.28
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 33 0.28
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 32 0.38
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 32 0.50
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 32 0.50
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 31 0.66
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 31 0.66
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 31 0.87
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 31 0.87
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 1.1
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 31 1.1
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 30 1.5
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 30 2.0
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 30 2.0
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 30 2.0
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 30 2.0
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 30 2.0
SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 30 2.0
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 29 2.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 2.7
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 29 2.7
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 29 3.5
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 29 3.5
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 3.5
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 29 3.5
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 29 4.6
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 29 4.6
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 4.6
SPAC664.08c |||traub transciption factor family protein |Schizos... 29 4.6
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 29 4.6
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 4.6
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 28 6.1
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 28 6.1
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 28 6.1
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 28 6.1
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 6.1
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 28 8.1
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 28 8.1
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 28 8.1
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 28 8.1
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 463 HEASDSEQISETVQSPKRERTIVEVQE-SLPVEITHINDVEVHEYLEEGKSNDKEHLELA 521
H D + ++ + +P R+ ++ + PV + ++ +E L ND+E L+L
Sbjct: 306 HTDKDHPEANQVLYTPIYARSTLKRRHVRAPVSLDAVDGIE----LSLRDLNDEESLQLK 361
Query: 522 KSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYESSDSTEKQDYDSKENLEQSENMQSE 581
++ Y+T+ L + K +++ K+ G++N S + + + E+ EQ+ ++ E
Sbjct: 362 RARYDTF--GLGNIKDLEEEEEKLRSVEGSLNEELSEEEKPAESREQLESAEQTNGVKPE 419
Query: 582 VQVR 585
Q +
Sbjct: 420 TQAQ 423
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 33.9 bits (74), Expect = 0.12
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 462 DHEASDSEQISETVQSPKR--ERTIVEVQESLPVEITHINDVEVHEYLEEGKSNDK-EHL 518
D+ S+ +Q+ E +Q + E I + E ++D++ + K+ D L
Sbjct: 676 DYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSEL 735
Query: 519 ELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNS-YESSDSTEKQDYDSK----ENLE 573
E +KSL N+ +K+++++ N + + N+ ES +T ++ SK +NL
Sbjct: 736 EKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLG 795
Query: 574 QSENMQSEVQVRPDEDNDRSESIDYYNNYENQKI 607
EN+ S+++ + E++ R + + N + +I
Sbjct: 796 NKENIISDLKNKLSEESTRLQELQSQLNQDKNQI 829
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 556 ESSDSTEKQDYD-SKEN--LEQSENMQSEVQVRPDEDNDRSESIDYYNNYENQ 605
E D EK K+N +E M+ E++ + +ND E+I YY N E+Q
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQEAIQYYINVESQ 88
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 32.7 bits (71), Expect = 0.28
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 144 QKNASKNPNEEDLIQEKTDETIVTPLPILQVFKNHKCSTENPNTDVASETVDDSLNSSKD 203
+K+ K LI + I T ++ KN++ S + P DV + + + S
Sbjct: 1082 EKSMKKLDQRVSLIPSSIEFNIKTQKDKVEFEKNYEKSKKGP--DVIANALVGGIPLSLK 1139
Query: 204 LIADITSYEIHKINNFGLRDEAKRPLTYRGAVHFKVETPRPNARNERFYYTTDYAPIISE 263
D + YE+ K + G E +RP+ + H E RP+ N +Y D P++ E
Sbjct: 1140 TKED-SLYELSKFSQCG---EDQRPMVLKDPDHLVPEPSRPHCGNGLVFY--DDIPLL-E 1192
Query: 264 SNKVNITQEGIKKLVAST-QDLISNE 288
N I+ E I K AS+ +D + +E
Sbjct: 1193 VNP--ISGETIPKFDASSFEDPVCDE 1216
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 538 IQDNSNKMLYQYGTMNSYESSDSTEKQDYDSKENLEQSENMQSE-VQVRPDEDND 591
IQD+SN +Y GT + +SS + D K Q + QSE V + D D D
Sbjct: 122 IQDDSNISIYAIGTSSKTDSSIQAASPNEDLKSEGAQEIDSQSETVSISSDVDYD 176
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 31.9 bits (69), Expect = 0.50
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 510 GKSNDKEHLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYESSDSTEKQDYDSK 569
G SN E S Y+T D+ S QD+ GT + +++ + +
Sbjct: 184 GNSNSYETTYSDSSNYHTSTDS--SQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSGS 241
Query: 570 ENLEQSENMQSEVQVRPDEDNDRSESIDYYNNYE 603
E+ E+ E++ E + DE+ND + D N E
Sbjct: 242 ESYERDEDVDEEEEEDDDENNDEGDDEDENENDE 275
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 412 NTSDIDISHDTDENVVDVTPRPIGQNYLAPITVALRLLNA 451
N S+ D +H+T EN ++ PIG L P +VA LLNA
Sbjct: 510 NPSNNDGAHNTSENADELVEPPIGNERLDPKSVA-NLLNA 548
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 553 NSYESSDSTEKQDYDSKENLEQSENMQSEVQVRPDEDNDRSESID 597
+S +TEK + +NLE ++++S + +RP ED+ S SI+
Sbjct: 47 DSIPEQSNTEKSIEINDKNLEAEKDIESNLSLRPPEDDLDSRSIE 91
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 276 KLVASTQDLISNEDLLKINHAAEKHVNDLSEDIIKPKPRFHAQTKSRNLKIENRPTEITV 335
K++ + S D L ++ + DLSED K + + N PT+
Sbjct: 263 KMIEGIRKKRSERDTLNVSTEFPEETKDLSEDTKPSKQARRFFGQKSIVSNRNMPTDNAK 322
Query: 336 RAKIENILRDI 346
+ K+EN+LR +
Sbjct: 323 QQKVENVLRRV 333
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 31.1 bits (67), Expect = 0.87
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 140 PNVNQKNASKNPNEEDLIQEKTDETIVTPLPILQVFKNHKCSTENPNTDVASETVDDSLN 199
PN+ + ++S P E + + PI +FK H S ENP TD + V DS
Sbjct: 421 PNLRRFSSSFGPRERKESFSSRNRLPLVNHPIRSIFK-HNVS-ENPITDHSEHAVYDSEF 478
Query: 200 SSKD 203
+SKD
Sbjct: 479 ASKD 482
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 31.1 bits (67), Expect = 0.87
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 500 DVEVHEYLEEGKSNDKEHLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYESSD 559
D+ L G S +H++ AK +YN + +L ++K + D+ N +LY+ ++ S+
Sbjct: 771 DLTAIRLLSNGFSVFSKHIDPAKFIYNLVLSSLENTKDL-DDKNSILYR--SIVDVSVSN 827
Query: 560 STEKQDYDSKENLEQ-SENMQSEV--QVRPDEDNDRSESIDYYNNYENQKIIQPIIVEKE 616
+ E EQ N++S + V +N +SE +N +K++ + +
Sbjct: 828 AVLLLTCLCDEVYEQMKSNLRSVILKVVSLAIENTQSE-FSLFNQLITEKLLPILYSSRS 886
Query: 617 VPVTKFVDRYIETRVPY 633
V V I T+ P+
Sbjct: 887 VEEVHDVTNAIATQFPF 903
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/170 (16%), Positives = 64/170 (37%), Gaps = 2/170 (1%)
Query: 452 NQSVTLNAVDDHEASDSEQISETVQSPKRERTIVEVQESLPVEITHINDVEVHEYLEEGK 511
++S + ++ + +S+SE S +S E + E +E + V+ +
Sbjct: 87 SESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSES 146
Query: 512 SNDKEHLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYESSDSTEKQDYDSKEN 571
++E + + + D+ S + S + + E + TE++ S E+
Sbjct: 147 EEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSE--SEEEEEVVEKTEEKKEGSSES 204
Query: 572 LEQSENMQSEVQVRPDEDNDRSESIDYYNNYENQKIIQPIIVEKEVPVTK 621
SE+ D D+ + + E ++ +P E+ +TK
Sbjct: 205 SSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITK 254
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 517 HLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYESSDSTEKQDYDSKENLEQSE 576
HL L YN A+ + KR N + + + +S++++D S N S+
Sbjct: 14 HLNL--EAYNAKSRAIENEKRYLGNDRNLPFHREREKVESNPNSSDEEDLTSTNNTRSSD 71
Query: 577 NMQSEVQVRPDEDNDRSE 594
N S+ + ED+ + E
Sbjct: 72 NTTSDTEDDSGEDSYQVE 89
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 30.3 bits (65), Expect = 1.5
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 459 AVDDHEASDSEQISETVQSPKRERTIVEVQESLPVE--ITHINDVEVHEYLEEGKSN--- 513
A DHE S Q S + K ++ I+E +E+L E I++I E E LE ++
Sbjct: 192 AEKDHEYSLQLQ-SYREAAEKAKQDILETKENLSSELSISNIQLKEAKERLEAANASYQK 250
Query: 514 -DKEHLELA----KSLYNTYIDALRSSKRIQD--NSNKMLYQYGTMNSYESSDSTEK--Q 564
+EH ELA K ++ + K D + Y++ N ES Q
Sbjct: 251 LRREHKELALYHEKKTHSLVCNLNGERKSFGDFVENEVKSYKHEYANICESLRRALVLIQ 310
Query: 565 DYDSKENLEQSENMQSEVQVRPDEDNDRSESIDYYNNYENQKIIQPIIVEKEVPVTKF 622
+++ L E + ++++ E+NDR I+Y N+ +K ++ I E E+ V ++
Sbjct: 311 GSCTEKILRFKEKILDLLEMKQQEENDRISHIEYENDLTVKK-LKRRISELEMAVKEY 367
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 196 DSLNSSKDLIADITSYE--IHKINNFGLRD 223
D+LN+ K +I+D T +E +H + NF L D
Sbjct: 924 DALNTMKPIISDFTVFEPALHTVENFDLTD 953
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 972 KYRNNRNVQSTLWGNQYASSYQYFNKTDKQSGLKNAQNVANYIKYLQH 1019
+Y + R S+L + +A + Y ++++GL++A +A+ I QH
Sbjct: 749 QYYSERTPGSSLIDHGFAMEFNYVKAENRENGLRSAGELASSINETQH 796
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 94 PIDIFLIQQQ-FTSPSAQENNLQISSPSNIQYSAPYITPFYQIQTQRPNVNQKNASKNPN 152
P D + + + SP +N ++SP + A YI + +Q R +K +PN
Sbjct: 300 PFDYLTVNENAYDSPMDADNREGVNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPN 359
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 29.9 bits (64), Expect = 2.0
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 467 DSEQISETVQSPKRERT---IVEVQESLPVEITHINDVEVHEYLEEGKSNDKEHLELAKS 523
D+EQ++ + T + + Q S P+ +H+ L + +ND +H +S
Sbjct: 163 DNEQVASPLSKKAASLTSSPLKDFQSSPPLSTVLQKSHSLHDILLD--TNDDDHFPFTQS 220
Query: 524 -LYNT--YIDALRSSKRI---------QDNSNKMLYQYGTMNSYESSDSTEKQDY----- 566
L T + DAL SS I SN++ + T N + + DS+ D
Sbjct: 221 PLTKTKSFNDALTSSSSILKPCMPSIASPTSNRLSHAPSTPNLFPNQDSSNTIDLINNRS 280
Query: 567 -DSKENLEQSENMQSEVQVRPDEDNDRSESIDYYNNYEN 604
S EN E++ N+ S+V + + SI+ + E+
Sbjct: 281 KTSVENQERTFNLTSDVHLDSPTSPSKHSSIEPNTSQED 319
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/151 (19%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Query: 449 LNANQSVTLNAVDDHEAS-DSEQISE--TVQSPKRERTIVEVQESLPVEITHINDVEVHE 505
LN + ++LN DD + S +S+++ +V S E +V++ L + N+
Sbjct: 99 LNNTKEISLNEEDDSDDSVNSDKLENEGSVGSSIDENELVDLDTLLDNDQPEKNESNTAS 158
Query: 506 YLEEGKSNDKEHLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYESSDSTEKQD 565
+ + +H ++L + + S+ +S + + + + ESSDS
Sbjct: 159 TIRPPWIGNNDHATDKENLLESDASSSNDSESELTDSADNMNESDSESEIESSDSDHDDG 218
Query: 566 YDSKENLEQSENMQSEVQVRPDEDNDRSESI 596
+S L+ N + + +D +ES+
Sbjct: 219 ENSDSKLDNLRNYIVSLNQKRKKDEADAESV 249
>SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 215
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 551 TMNSYESSDSTEKQDYDSKENLEQSENMQSEVQVRPDEDNDRSESIDYYNNYENQKII 608
T+NS + D ++ D + E+ Q E+ +E D D DR E I + ++ +K I
Sbjct: 159 TINSEYADDVSDNTDEERTESKGQQESNSAEEYDDDDSDEDRMEEI--FQQFKKEKQI 214
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 331 TEIT-VRAKIENILRDIENTSDKSKSNIIETNSNDYKFASPIVVPDNTYADFKEQIVNNL 389
TEI V+ + EN + E S + +SN + ++P + P +T++ +++VN
Sbjct: 525 TEIPLVKNEDENARKPTEPNCLGSDELDVSNSSNQFFCSAPKLDPTSTFSGVAQRVVNTF 584
Query: 390 VSTMVPYI-ADGY 401
+ +P + D Y
Sbjct: 585 TNLFIPAVPTDSY 597
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 820 PRPVAIPVHIPQPYPVDRIVEKKVPYPVPVDRIVEKKIPVKVPYAVEKYVEKIVEKPVVL 879
PRP A P IP P PV I+ P P D + V + + ++ P +
Sbjct: 961 PRPAA-PPSIPPPLPVSNILSSPTSEP-PKDHPPSAPLSKPVSTSPAAPLARVPPVPKLS 1018
Query: 880 TKYVDKPYPVEKRVPYPV 897
+K P P P PV
Sbjct: 1019 SKAPPVPLPSADAPPIPV 1036
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 29.5 bits (63), Expect = 2.7
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 13/194 (6%)
Query: 321 SRNLKIENRPTEITVRAKIENILRDIENTSDKSKSNIIETNSNDYKFASPIVVPDNTYAD 380
+R+ I +PT+ + KIE I D SD S+++ + + N P + +
Sbjct: 336 NRSHSILQKPTDTSPLHKIEPISADELVESDDSRTSALSNSQN----------PSDDVEN 385
Query: 381 FKEQIVNNLVSTMVPYIADGYQIVDVKSGYNNTSDIDISHDTDENVVDVTPRPIGQNYLA 440
+Q + L T P I + + N + +S + E+ V + + + LA
Sbjct: 386 QSDQALEVLSLTNPPKIDNASADTTLHKETNKIDKLYVSENKAESAV-ASESSLSEGTLA 444
Query: 441 PITVALRLLNANQSVTLNAVDDHEASDSEQISETVQSPKRERTIVEVQESLPVEITHIND 500
A S + V +++A DS + +V K E +I + E N
Sbjct: 445 LKAPAPENKPEKSSTSKPPVPENKAEDSVVLKSSVPEDKSENSIASKPSA--TEGIPENA 502
Query: 501 VEVHEYLEEGKSND 514
+ + + E K+ D
Sbjct: 503 IALQSSVPENKAED 516
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/55 (27%), Positives = 33/55 (60%)
Query: 530 DALRSSKRIQDNSNKMLYQYGTMNSYESSDSTEKQDYDSKENLEQSENMQSEVQV 584
+++ SS+ + S+++ Q + + ESS+ +S+ + E+SE+ +SEV+V
Sbjct: 15 ESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEV 69
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 200 SSKDLIADITSYEIHKINNFGLRDEAKRPLTYRGAVHFKVETPRPNARNERFYYTTDYAP 259
++KDL +DI+S + K NN + +PL + G + FK P P + T
Sbjct: 169 TAKDL-SDISSSSMKKANN------SSKPL-FSGKLTFKANIPVPTSEVVTENNVTRNVT 220
Query: 260 IISESNKVNITQEGIKKLVASTQDLISNEDLLKINHAAEKHVND 303
+ S + E + +D+ SNE L ++ ND
Sbjct: 221 VYSNQKHLGNESENFNDMEGRAEDISSNELLPTPEEYPYRYNND 264
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 288 EDLLKINHAAEKHVNDLSE---DIIKPKPRFHAQTKSRNLKIENRPTEITVRAKIENILR 344
+D+LK+ +EK + + + ++ KP + NL+ E + +++ + +K E I R
Sbjct: 124 KDILKVKEKSEKPLETSQKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKEEKISR 183
Query: 345 DIENTSDKSKSNIIE 359
++ ++S +S S + E
Sbjct: 184 NLRSSS-RSISPVTE 197
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 365 YKFASPIVVPDNTYADFKEQIVNNLVSTMVP 395
Y P PDN Y +F E+ +N LV P
Sbjct: 63 YVLRKPRTSPDNNYVEFTEKEINELVDDWKP 93
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 262 SESNKVNITQEGIKKLVASTQDLISN---------EDLLKINHAAEKHVNDLSEDI-IKP 311
S+ N +N ++E ++K A +L ++ E + + HA HV+ LS+ I+P
Sbjct: 106 SKRNTLNKSKESLQKDEAEYVELANSLKTKVETNIEIRILMAHAIRMHVSHLSKIYPIQP 165
Query: 312 KPRFHAQTKSRNLKIENRPTEI 333
P H + RNL++ P +I
Sbjct: 166 SPGNHDEFTIRNLRLSFEPDKI 187
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 926 HIPAYRYYSDEEARHIIHYQKPDQRNTQTQLSQAQAYARYLQSLSDKYRNNRNVQSTLWG 985
H RYY E+ R D Q SQ+Q A ++S +Y+NN VQ+T
Sbjct: 467 HADGQRYYRPEQDRSQRLRNPSDYGRQGRQSSQSQQPA---WNVSSRYQNNSKVQTTSRA 523
Query: 986 NQYASS 991
++ A +
Sbjct: 524 SENADT 529
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 492 PVEITHINDVEVHEYLEEGKSNDKEHLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGT 551
PV++T I+ + L G + + L +L+ Y R I +N +M Y Y T
Sbjct: 71 PVDLTQISIYQQLTILLFGVLSTPITVNLGLTLFKLYFYNKRYDMVITNNKLRMTYTYHT 130
Query: 552 MNSYESSDSTEKQDYDSKENLEQSENMQSEVQVRPDEDNDRSESIDYYNNYENQK 606
+ ++ + ++ + + L+Q M RP ++E ++ N ++ +
Sbjct: 131 VRRRDTPEPSKVGNRKIRVLLDQGNQMH-----RPVAPETKAEEAEHQENEKHHR 180
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 508 EEGKSNDKEH-LELAKS-LYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYESSDSTEKQD 565
EE + +EH +++++S L + L + + S + L G++NS SS S E++D
Sbjct: 39 EENDTLGREHYVDVSESKLRSKQAPQLDPKFKGRKTSRQELLNSGSLNSQSSSPS-EEED 97
Query: 566 YDSKEN---LEQSENMQSEVQV---RPDEDNDRSESIDYYNNYENQKII 608
+ EN E EN S +ED+D+S +I + +KII
Sbjct: 98 SEEDENDAVSEDHENFSSSEASSISEENEDDDQSSAIPEKDMDRLKKII 146
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 934 SDEEARHIIHYQKPDQRNTQTQLSQAQAYARYLQSLSDKYRNNRNVQSTLWGNQYASSYQ 993
S + R + + + NT L QA +Y L D+ RN+ L N Y +
Sbjct: 507 SAQSERILSNLAEKKNPNTDQLLLQANSYLAQWDLLKDE----RNMLKKLGSNDYFNISM 562
Query: 994 YFNKTDKQSGLK 1005
Y N TD S LK
Sbjct: 563 YSNHTDIHSLLK 574
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 28.7 bits (61), Expect = 4.6
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 8/161 (4%)
Query: 435 GQNYLAPITVALRLLNANQSVTLNAVDDHEASDSEQISETVQSPKRERTIVEVQESLPVE 494
GQ+++ A+ + AN + L+ D A + E + S T V E P E
Sbjct: 280 GQSFILDSNGAIEV--ANSAFALDDSDLESAYNEELEMKKDTSKPTASTKEVVVEKKPDE 337
Query: 495 ITHINDVEVHEYLEE--GKSNDKEHLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTM 552
+ EE G SN K + ++ +T ++A K D
Sbjct: 338 SRKQAARTLETVSEEQMGSSNAKSKVLTSEPKDSTSVEA---EKTETDEPAVGKGASDVS 394
Query: 553 NSYESSDSTEKQDYDSKENLEQSENMQSEVQVRPDEDNDRS 593
++ E S+ TE ++ DS+ NLE+ ++ E + + DE+N S
Sbjct: 395 DTAEISEKTEAKNADSEANLEEKSDVGEEKESK-DENNKAS 434
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 870 EKIVEKPVVLTKYVDKPYPVEKRVPYPVEKIV 901
+ +VEK V L ++K P+E R+ Y V+K++
Sbjct: 60 QDVVEKLVQLRIEIEKIRPLENRIQYSVDKLL 91
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 516 EHLELAKSLYNTYIDALRSSKR--IQDNSNKMLYQYGTMNSYESSDSTEKQDYDSKENLE 573
+H + +SL + D+ + SK+ + ++ G+ +S + SDS+ + S E+ +
Sbjct: 68 KHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDND 127
Query: 574 QSENMQSEVQVRPDEDNDRSES 595
S + ED+D S S
Sbjct: 128 SSSSSSDSESESSSEDSDSSSS 149
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 28.3 bits (60), Expect = 6.1
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 513 NDKEHLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYESSDSTEKQDYDSKENL 572
N ++ E A + + I ALR+ Q+N + + + N SS E QD+ S NL
Sbjct: 132 NHQQEFERAARRFRSSIAALRNLNT-QNNQSTLASNHEDEN-VSSSGGQEMQDHGSVNNL 189
Query: 573 EQSENMQSEVQVR-----PDED-NDRSESI-DYYNNYEN 604
E + VR D + D + ++ +Y NN EN
Sbjct: 190 ESPGTAIGRLPVRSVTSLADSNMEDYTRAVMNYINNSEN 228
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 28.3 bits (60), Expect = 6.1
Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 12/209 (5%)
Query: 171 ILQVFKNHKCSTENPNTDVASETVDDSLNSSKDLIADITSYEIHKINNF-GLRDEAKRPL 229
+LQVF + ++ + D L SSK I ++ S I +F G EAK
Sbjct: 60 LLQVFDTNFKKETKERKEMLKKKCTDELESSKKKIEELVS----SIESFQGENGEAKTGS 115
Query: 230 TYRGAVHFKVETPRPNARNERFYYTTDYAPIISESNKVNITQEGIKKLVASTQDLISN-- 287
T R ++ E+ Y+T ++ S+ ++T G +L+ T++ SN
Sbjct: 116 TSL-TRSASATVSRKSSLQEK--YSTRFSYKAGCSDSCSVTVSGTGELIGPTRNAHSNLT 172
Query: 288 -EDLLKINHAAEKHVNDLSEDIIKPKPRFHAQTKSRNLKIENRP-TEITVRAKIENILRD 345
+ +I+ N+ S + +P + + +S + P + +A +E ++D
Sbjct: 173 PTVIQRIDFENVNEKNNSSSEDTQPNGKRPSSLQSNFSQFPLNPWLDNIYKACLEGSMKD 232
Query: 346 IENTSDKSKSNIIETNSNDYKFASPIVVP 374
+ ++S+ + E + Y ++ P
Sbjct: 233 VIDSSNNLCEYLHEHSDPAYAKNFSLITP 261
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 467 DSEQISETVQSPKRERTIVEVQESLPVE--ITHINDVEVHEYLEEGK 511
D+ Q ETV PKRE+T VE P +T DV+ E EE K
Sbjct: 473 DNHQKEETVTQPKREKTPVEKSFPKPASSPVTFSEDVK-KEPSEEKK 518
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 802 EKPVTVTKYVEKPVHIEVPRPVAIPVHIPQPYPVDRIVEKKVPY----PVPVDRIVEKKI 857
E+ VT K + PV P+P + PV + + EKK+ P KK+
Sbjct: 478 EETVTQPKREKTPVEKSFPKPASSPVTFSEDVKKEPSEEKKLEVSDEAPKAAPLAESKKV 537
Query: 858 PVKVPYAVEK 867
K P+ V K
Sbjct: 538 EEKEPFYVSK 547
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 549 YGTMNSYESSDSTEKQDYDSKENLEQSENMQSEVQVRPDEDN-----DRSESIDYYNNYE 603
Y +S SS ++ D + E + S+ +P+ +N +RSE + Y
Sbjct: 24 YSPSSSGSSSGASLLVDIMCGSKETEDEEVDSDEWDKPETENISDLDERSEMVRYLRASG 83
Query: 604 NQKIIQPIIVEKEVPVTKFVDR 625
K ++ ++E+E+PV + +
Sbjct: 84 YAKFLEKYLIEEELPVRSILKK 105
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 341 NILRDIENTSDKSKSNIIETNSNDYKFASPIVVPDNTYADFKEQIVNNLVSTMVP 395
+ L+++E ++ +NI+ DY P V TY K + N V M P
Sbjct: 221 SFLKNVERPAEGDAANIMINAEGDYVVVQPDVASWETYQSRKAALTANDVYKMQP 275
>SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1163
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 498 INDVEVHEYLEEGKSNDKEHLELAKSLYNTYIDALRSSKRIQDNSNKMLYQYGTMNSYES 557
IND + E +E+ +N ++H E+ + TY++A+ + K ++ G N +
Sbjct: 1077 INDSDEDELIEDSLANAQQHAEVNR----TYLEAV---------AGKESFRRGLNNRVKF 1123
Query: 558 SDSTEKQDYDSKENLEQSE 576
S+ + DYD E +E+ E
Sbjct: 1124 SNKRVRDDYD--EEMEEVE 1140
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 27.9 bits (59), Expect = 8.1
Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 11/169 (6%)
Query: 64 GQTAIDLNKLDYGGPTTTIQPANLVSSNTQPIDIFLIQQQFTSPSAQENNLQ-ISSPSNI 122
G ++ +K+ + + + +SS + D F+ + SP Q + + P+++
Sbjct: 116 GSDSVSRDKIPFSASSRASSTKSTLSS-VKETD-FVTETLILSPDNQAPRMSFVGKPNSV 173
Query: 123 QYSAPYITPFYQIQTQRPNVNQKNASKNPNEEDLIQEKTDETIVTPLPILQVFKNHKCST 182
T +Q T+ +N ASK N LIQ KT IL++ + T
Sbjct: 174 AEIVR--TVMHQTSTR---INVSTASKTKNTTFLIQGKTSAVKAARRQILKLIGRRETKT 228
Query: 183 ENPNTDVASETVDDSLNSSKDLI-ADITSYEIHKINNFG--LRDEAKRP 228
V + + + K ++ T +I K NN D+AK+P
Sbjct: 229 MPCPVFVVGAIIGTNGQNLKSIMDRTSTRIQIPKRNNTANESSDDAKKP 277
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,980,443
Number of Sequences: 5004
Number of extensions: 225589
Number of successful extensions: 785
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 736
Number of HSP's gapped (non-prelim): 75
length of query: 1082
length of database: 2,362,478
effective HSP length: 80
effective length of query: 1002
effective length of database: 1,962,158
effective search space: 1966082316
effective search space used: 1966082316
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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