BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000083-TA|BGIBMGA000083-PA|undefined
(1082 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 67 2e-12
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 29 0.50
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 29 0.66
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 29 0.66
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 29 0.66
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 29 0.66
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 29 0.66
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 29 0.66
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 29 0.66
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 29 0.66
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 29 0.66
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 29 0.87
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 27 2.7
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 27 2.7
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 26 4.6
DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein. 26 6.1
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 25 8.1
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 25 8.1
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 67.3 bits (157), Expect = 2e-12
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 813 KPVHIEVPRPVAIPVHIPQPYPVDRIVEKKVPYPVPVDRIVEKKIPVKVPYAVEKYVEKI 872
K V + V + V +PV P P V V+ +P P P+ VE+ P+K+P + K + K+
Sbjct: 164 KTVPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQ--PIKIP--IYKVIPKV 219
Query: 873 VEKPVVLTKYVDKPYPVEKRVPYPVEKIVEKRVP 906
+EKPV T V+KPYP+E P+PVE + + VP
Sbjct: 220 IEKPVPYT--VEKPYPIEVEKPFPVEVLKKFEVP 251
Score = 61.7 bits (143), Expect = 1e-10
Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 800 IVEKPVTVTKYVEKPVHIEVPRPV--AIP----VHIPQPYPVDRIVEKKVPYPVPVDRIV 853
+ EK TV V + V + VP PV A+P V+IPQPYP+ VE+ P +P+ +++
Sbjct: 159 VSEKSKTVPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQ--PIKIPIYKVI 216
Query: 854 EKKIPVKVPYAVEKYVEKIVEKPVVLTKYVDKPYPVEKRVPYPVEKIVEKRV 905
K I VPY VEK VEKP + PV K PYPV V K +
Sbjct: 217 PKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPK--PYPVPVTVYKHI 266
Score = 54.8 bits (126), Expect = 1e-08
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 770 PVEKRVPYPVPYETKVAIPVPIEHRVPVEKIVEKPV--TVTKYVEKPVHIEVPRPVAIPV 827
PV VP VP+ KV IP P +V VE+ ++ P+ + K +EKPV V +P P+
Sbjct: 177 PVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPY--PI 234
Query: 828 HIPQPYPVDRIVEKKVPYPVPVDRIVEKKIPVKVPYAVEKYV 869
+ +P+PV+ V KK PVP P VP V K++
Sbjct: 235 EVEKPFPVE--VLKKFEVPVPK--------PYPVPVTVYKHI 266
Score = 53.2 bits (122), Expect = 4e-08
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 773 KRVPYPVPYETKVAIPVPIEHRVP--VEKIVEKPVTVTKYVEKPVHIEVPRPVAIPVHIP 830
K VP PV + V +P P+ VP V+ + +P + VE+P+ I + + + + P
Sbjct: 164 KTVPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKP 223
Query: 831 QPYPVDRIVEKKVPYPVPVDRIVEKKIPVKVPYAVEKYVEK 871
PY V++ +V P PV+ + + ++PV PY V V K
Sbjct: 224 VPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYK 264
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 838 IVEKKVPYPVPVDRIVEKKIPVKVPYAVEKYVEKIVEKPVVLTKYVDKPY--PVEKRVPY 895
+ EK PVPV + V +P VP AV YV+ + +P L V++P P+ K +P
Sbjct: 159 VSEKSKTVPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIP- 217
Query: 896 PVEKIVEKRVPY 907
K++EK VPY
Sbjct: 218 ---KVIEKPVPY 226
Score = 34.3 bits (75), Expect = 0.018
Identities = 29/71 (40%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 769 YPVEKRVPYPVPYETKVAIPVPIEHRVP--VEKI----VEKP--VTVTKYVEKPVHIEVP 820
YP++ V P+ IP IE VP VEK VEKP V V K E PV P
Sbjct: 198 YPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYP 257
Query: 821 RPVAIPVHIPQ 831
PV + HI Q
Sbjct: 258 VPVTVYKHIMQ 268
Score = 30.3 bits (65), Expect = 0.29
Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 16/105 (15%)
Query: 699 VPYSVEKVIEKQILHPVPIPTP------VGIPYAIQIPVEHKILYXXXXXXXXXXXXXXX 752
VP V + + + HPVPI P + PY +Q+ VE I
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPI----------KIPIYKV 215
Query: 753 XXXXXXXXXXXXXXXXYPVEKRVPYPVPYETKVAIPVPIEHRVPV 797
YP+E P+PV K +PVP + VPV
Sbjct: 216 IPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPV 260
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 694 DRPVHVP-YSV-EKVIEKQILHPVPIPTPVGI--PYAIQI 729
++P+ +P Y V KVIEK + + V P P+ + P+ +++
Sbjct: 205 EQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEV 244
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 29.5 bits (63), Expect = 0.50
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 152 PSAVKIAQPVHKVIAQPVDVSSYAHAPVAHATVQHHHAAPIAHYSAP 198
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 152 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAP 198
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 144 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAP 190
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 152 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAP 198
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 144 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAP 190
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 152 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAP 198
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 176 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAP 222
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 144 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAP 190
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 144 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAP 190
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 144 PSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAP 190
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 28.7 bits (61), Expect = 0.87
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 789 VPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
V I H PV K++ +PV V+ Y PV H V A P+ H P
Sbjct: 155 VKIAH--PVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAP 198
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 27.1 bits (57), Expect = 2.7
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 498 INDVEVHEYLEEGKSNDKE-HLELAKSLYNTYIDA---LRSSKRIQDNSNKMLYQYGTMN 553
+N++ ++ EG ++D++ ++L S YN D +R + D+S+ + +
Sbjct: 319 LNEITPYDKYPEGPADDRQVFVDLVYS-YNMAHDKNNFVRPANETDDSSSSS----SSSS 373
Query: 554 SYESSDSTEKQDYDSKENLEQSENMQ 579
S SDS+ D S + E++EN +
Sbjct: 374 SDSDSDSSSSSDSSSSSSEEEAENFK 399
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 27.1 bits (57), Expect = 2.7
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 498 INDVEVHEYLEEGKSNDKE-HLELAKSLYNTYIDA---LRSSKRIQDNSNKMLYQYGTMN 553
+N++ ++ EG ++D++ ++L S YN D +R + D+S+ + +
Sbjct: 319 LNEITPYDKYPEGPADDRQVFVDLVYS-YNMAHDKNNFVRPANETDDSSSSS----SSSS 373
Query: 554 SYESSDSTEKQDYDSKENLEQSENMQ 579
S SDS+ D S + E++EN +
Sbjct: 374 SDSDSDSSSSSDSSSSSSEEEAENFK 399
Score = 27.1 bits (57), Expect = 2.7
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 471 ISETVQSPK-RERTIVEVQESLPVEITHINDVEVHEYLEEGKSNDKEHLE-LAKSLYNTY 528
I E ++ K R V +LP I + + +HEY SN +H E L + +Y
Sbjct: 623 IKELIEEKKLRGNEAASVIATLPKTIRYPTETVMHEYFLLVTSNAVQHQEYLNTTALISY 682
Query: 529 IDALRSSKRIQDNSNKMLYQYGTMNSY 555
D L R Q N N+ Y Y + S+
Sbjct: 683 CDFL---NRAQVN-NRSAYNYYPVYSF 705
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 127 PYITPFYQIQTQRPNVNQKNASKNPNEEDL-IQEKTDETIVTPL 169
PY TP QR N ++N K N +++ T+VT L
Sbjct: 93 PYATPQQSASVQRRNARERNRVKQVNNGFANLRQHIPSTVVTAL 136
>DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein.
Length = 494
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 14 YYVKLPQQRYLSVIKAEQRV 33
YY + PQ RY +++ QRV
Sbjct: 26 YYTQAPQARYTPMVRTAQRV 45
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 25.4 bits (53), Expect = 8.1
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 202 KDLIADITSYEIHKINNFGLRDEAKRPLTYRGAVHFKVETPRPNARNERFYYTTDYAPII 261
+DL AD+ +++ ++ DE +R L Y K P + + + II
Sbjct: 38 RDLNADVNAFQRKFVSEVRRCDEMERKLRYVEGEVKKDSVQIPECSVDDWPRAPNPREII 97
Query: 262 SESNKVNITQEGIKKLVASTQDLISNE-DLLKINHAAEK 299
++ T+ I +L + +L SN +L ++ H E+
Sbjct: 98 DLEARLEKTENEILELSQNAVNLKSNYLELTELKHVLER 136
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 788 PVPIEHRVPVEKIVEKPVTVTKYVEKPV-HIEVPRPVAIPV-HIPQP 832
P ++ PV K++ + V V+ Y PV H V A P+ H P
Sbjct: 144 PSAVKIAQPVHKVIAQNVHVSSYAHAPVAHATVQHHHAAPIAHYSAP 190
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.312 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,035,644
Number of Sequences: 2123
Number of extensions: 42830
Number of successful extensions: 135
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 39
length of query: 1082
length of database: 516,269
effective HSP length: 71
effective length of query: 1011
effective length of database: 365,536
effective search space: 369556896
effective search space used: 369556896
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 53 (25.4 bits)
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