Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000082-TA|BGIBMGA000082-PA|IPR004000|Actin/actin-like
(388 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 601 e-172
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 345 4e-95
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 344 6e-95
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 344 6e-95
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 344 6e-95
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 343 1e-94
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 343 1e-94
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 343 1e-94
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 342 3e-94
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 336 1e-92
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 331 6e-91
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 309 3e-84
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 271 5e-73
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 180 2e-45
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 92 7e-19
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 91 9e-19
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 82 6e-16
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 82 7e-16
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 82 7e-16
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 81 1e-15
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 81 1e-15
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 4e-12
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 42 0.001
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 33 0.34
U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical pr... 33 0.45
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical ... 29 5.6
AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical ... 29 5.6
AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical ... 29 5.6
AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical ... 29 7.4
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 601 bits (1483), Expect = e-172
Identities = 272/381 (71%), Positives = 324/381 (85%), Gaps = 1/381 (0%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
MD +GRKVIV DNGTGFVKCG+AG+NFPA IFPSMVGRPI+R+ ++G+I++KDLMVG+E
Sbjct: 1 MDSQGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
S+LR ML+++YPM+NG+VRNW+DM HVWD+TFGP K+++DPKE K+LLTEPP+NP NR
Sbjct: 61 CSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM +VMFE+Y F+S YVA+QAVLTLYAQGL+ THICPVYE FAL HLTR
Sbjct: 121 EKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTR 180
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLDIAGRDIT+YLIKLLL RGY FNHSADFETVR MKEKLCYI Y++EQE+RLALETTVL
Sbjct: 181 RLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVL 240
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ YTLPDGRVI++GGERFEAPE LFQPHLINVE G++EL+F IQA+DID R + YKH
Sbjct: 241 SQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKH 300
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
IVLSGG+TMYPGLPSRLE+E+KQLYL+RVL D KFKIR+E PP RK MVF+GGAV
Sbjct: 301 IVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAV 360
Query: 361 LAEVCKNRD-NFWLSRNEYLE 380
LA + K+RD +FW+S+ EY E
Sbjct: 361 LANLMKDRDQDFWVSKKEYEE 381
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 345 bits (847), Expect = 4e-95
Identities = 175/380 (46%), Positives = 238/380 (62%), Gaps = 15/380 (3%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NR
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM ++MFE + + YVAIQAVL+LYA G TH P+YE +ALPH
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL 237
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ Y LPDG+VI VG ERF PEALFQP + +E GI E +N+I DID+R +LY +
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
VLSGG+TMYPG+ R+++EI L S KI++ PP RK V+IGG++
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI 346
Query: 361 LAEVCKNRDNFWLSRNEYLE 380
LA + W+S+ EY E
Sbjct: 347 LASL-STFQQMWISKQEYDE 365
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 344 bits (846), Expect = 6e-95
Identities = 175/380 (46%), Positives = 238/380 (62%), Gaps = 15/380 (3%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NR
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM ++MFE + + YVAIQAVL+LYA G TH P+YE +ALPH
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL 237
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ Y LPDG+VI VG ERF PEALFQP + +E GI E +N+I DID+R +LY +
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
VLSGG+TMYPG+ R+++EI L S KI++ PP RK V+IGG++
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI 346
Query: 361 LAEVCKNRDNFWLSRNEYLE 380
LA + W+S+ EY E
Sbjct: 347 LASL-STFQQMWISKQEYDE 365
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 344 bits (846), Expect = 6e-95
Identities = 174/380 (45%), Positives = 238/380 (62%), Gaps = 15/380 (3%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D ++ DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NR
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM ++MFE + + YVAIQAVL+LYA G TH P+YE +ALPH
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL 237
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ Y LPDG+VI VG ERF PEALFQP + +E GI E +N+I DID+R +LY +
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
VLSGG+TMYPG+ R+++EI L S KI++ PP RK V+IGG++
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI 346
Query: 361 LAEVCKNRDNFWLSRNEYLE 380
LA + W+S+ EY E
Sbjct: 347 LASL-STFQQMWISKQEYDE 365
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 344 bits (846), Expect = 6e-95
Identities = 175/380 (46%), Positives = 238/380 (62%), Gaps = 15/380 (3%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NR
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM ++MFE + + YVAIQAVL+LYA G TH P+YE +ALPH
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL 237
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ Y LPDG+VI VG ERF PEALFQP + +E GI E +N+I DID+R +LY +
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
VLSGG+TMYPG+ R+++EI L S KI++ PP RK V+IGG++
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI 346
Query: 361 LAEVCKNRDNFWLSRNEYLE 380
LA + W+S+ EY E
Sbjct: 347 LASL-STFQQMWISKQEYDE 365
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 343 bits (844), Expect = 1e-94
Identities = 174/380 (45%), Positives = 238/380 (62%), Gaps = 15/380 (3%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NR
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM ++MFE + + YVAIQAVL+LYA G TH P+YE +ALPH
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL 237
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ Y LPDG+VI VG ERF PEA+FQP + +E GI E +N+I DID+R +LY +
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
VLSGG+TMYPG+ R+++EI L S KI++ PP RK V+IGG++
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI 346
Query: 361 LAEVCKNRDNFWLSRNEYLE 380
LA + W+S+ EY E
Sbjct: 347 LASL-STFQQMWISKQEYDE 365
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 343 bits (844), Expect = 1e-94
Identities = 174/380 (45%), Positives = 238/380 (62%), Gaps = 15/380 (3%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NR
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM ++MFE + + YVAIQAVL+LYA G TH P+YE +ALPH
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL 237
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ Y LPDG+VI VG ERF PEA+FQP + +E GI E +N+I DID+R +LY +
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
VLSGG+TMYPG+ R+++EI L S KI++ PP RK V+IGG++
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI 346
Query: 361 LAEVCKNRDNFWLSRNEYLE 380
LA + W+S+ EY E
Sbjct: 347 LASL-STFQQMWISKQEYDE 365
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 343 bits (844), Expect = 1e-94
Identities = 174/380 (45%), Positives = 238/380 (62%), Gaps = 15/380 (3%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NR
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM ++MFE + + YVAIQAVL+LYA G TH P+YE +ALPH
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL 237
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ Y LPDG+VI VG ERF PEA+FQP + +E GI E +N+I DID+R +LY +
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
VLSGG+TMYPG+ R+++EI L S KI++ PP RK V+IGG++
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI 346
Query: 361 LAEVCKNRDNFWLSRNEYLE 380
LA + W+S+ EY E
Sbjct: 347 LASL-STFQQMWISKQEYDE 365
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 342 bits (840), Expect = 3e-94
Identities = 173/380 (45%), Positives = 237/380 (62%), Gaps = 16/380 (4%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNR 120
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NR
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 121 EKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTR 180
EKM ++MFE + + YVAIQAVL+LYA G TH P+YE +ALPH
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVL 240
RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL 237
Query: 241 VEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKH 300
+ Y LPDG+VI VG ERF PEA+FQP + +E GI E +N+I DID+R +LY +
Sbjct: 238 EKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Query: 301 IVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAV 360
VLSGG+TMYPG+ R+++EI L KI++ PP RK V+IGG++
Sbjct: 298 TVLSGGTTMYPGIADRMQKEITAL------------APTMKIKIIAPPERKYSVWIGGSI 345
Query: 361 LAEVCKNRDNFWLSRNEYLE 380
LA + W+S+ EY E
Sbjct: 346 LASL-STFQQMWISKQEYDE 364
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 336 bits (827), Expect = 1e-92
Identities = 165/372 (44%), Positives = 235/372 (63%), Gaps = 15/372 (4%)
Query: 9 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 68
+V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDEA R +L
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 69 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMF 128
+ YP+E+G+V NW+DM +W +TF +++ + P+E +LLTE P+NP NREKM ++MF
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKSNREKMTQIMF 124
Query: 129 EKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIAGRD 188
E + + YV IQAVL+LYA G TH P+YE +ALPH +RLD+AGRD
Sbjct: 125 ETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRD 184
Query: 189 ITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVLVEPYTLPD 248
+T Y++K+L RGY F +A+ E VR +KEKLCY+ ++ E E A ++ L + Y LPD
Sbjct: 185 LTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPD 244
Query: 249 GRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKHIVLSGGST 308
G+VI +G ERF PE LFQP I +EG GI E + +I D+D+R +LY + VLSGG++
Sbjct: 245 GQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTS 304
Query: 309 MYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAVLAEVCKNR 368
M+PG+ R+++EI+ L S KI++ PP RK V+IGG++LA +
Sbjct: 305 MFPGIADRMQKEIQHL-----------APSTMKIKIIAPPERKYSVWIGGSILASL-STF 352
Query: 369 DNFWLSRNEYLE 380
W+S+ EY E
Sbjct: 353 QQMWISKQEYDE 364
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 331 bits (813), Expect = 6e-91
Identities = 167/362 (46%), Positives = 229/362 (63%), Gaps = 15/362 (4%)
Query: 19 KCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSMLEVSYPMENGV 78
+ GFAG + P +FPS+VGRP R + + + KD VGDEA R +L + YP+E+G+
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 62
Query: 79 VRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYEFDSAYV 138
V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++MFE + + YV
Sbjct: 63 VTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 121
Query: 139 AIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLL 198
AIQAVL+LYA G TH P+YE +ALPH RLD+AGRD+T YL+K+L
Sbjct: 122 AIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
Query: 199 LRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVLVEPYTLPDGRVIKVGGER 258
RGY+F +A+ E VR +KEKLCY+ + EQE A ++ L + Y LPDG+VI VG ER
Sbjct: 182 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNER 241
Query: 259 FEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLPSRLE 318
F PEALFQP + +E GI E +N+I DID+R +LY + VLSGG+TMYPG+ R++
Sbjct: 242 FRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQ 301
Query: 319 REIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAVLAEVCKNRDNFWLSRNEY 378
+EI L S KI++ PP RK V+IGG++LA + W+S+ EY
Sbjct: 302 KEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL-STFQQMWISKQEY 349
Query: 379 LE 380
E
Sbjct: 350 DE 351
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 309 bits (758), Expect = 3e-84
Identities = 154/328 (46%), Positives = 209/328 (63%), Gaps = 13/328 (3%)
Query: 53 KDLMVGDEASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEP 112
KD VGDEA R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE
Sbjct: 7 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEA 65
Query: 113 PMNPTKNREKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEE 172
P+NP NREKM ++MFE + + YVAIQAVL+LYA G TH P+YE
Sbjct: 66 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 125
Query: 173 FALPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQR 232
+ALPH RLD+AGRD+T YL+K+L RGY+F +A+ E VR +KEKLCY+ + EQE
Sbjct: 126 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 185
Query: 233 LALETTVLVEPYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADID 292
A ++ L + Y LPDG+VI VG ERF PEALFQP + +E GI E +N+I DID
Sbjct: 186 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDID 245
Query: 293 MRNELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKD 352
+R +LY + VLSGG+TMYPG+ R+++EI L S KI++ PP RK
Sbjct: 246 IRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKY 294
Query: 353 MVFIGGAVLAEVCKNRDNFWLSRNEYLE 380
V+IGG++LA + W+S+ EY E
Sbjct: 295 SVWIGGSILASL-STFQQMWISKQEYDE 321
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 271 bits (665), Expect = 5e-73
Identities = 139/370 (37%), Positives = 206/370 (55%), Gaps = 19/370 (5%)
Query: 9 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 68
+V DNG+G +K GFAG P F + VGRP G +D D+ +G +A R +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRV-MAGGLD-GDIFIGPKAESNRGLF 68
Query: 69 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMF 128
+ YPME+G+V NW DM +W+Y FG ++ + P+E +LLT+ P+NP KNRE+ E+ F
Sbjct: 69 SIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFF 128
Query: 129 EKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIAGRD 188
E + + Y+ +QAVL+LYA G TH P+ + FA+ H +R+D+AGRD
Sbjct: 129 ETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRD 188
Query: 189 ITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVLVEPYTLPD 248
+T YL LL GY F+ S +FE VR MKE CY+ + + +E + Y LPD
Sbjct: 189 VTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALDPTK-----VENNSVKSSYALPD 243
Query: 249 GRVIKVGGERFEAPEALFQPHLINVEGQGIAELVFNTIQAADIDMRNELYKHIVLSGGST 308
I++ F APE LF+P LI E G+A +V +I D+D+R LY +IVLSGG+T
Sbjct: 244 TTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTT 303
Query: 309 MYPGLPSRLEREIKQLYLERVLRNECDKLSKFKIRVEDPPRRKDMVFIGGAVLAEVCKNR 368
++ G RL E++++ + KIR+ R + +IGG+++A + R
Sbjct: 304 LFKGFGDRLLGEMRKI-----------APADGKIRISASQERNSLTWIGGSIVASLDTFR 352
Query: 369 DNFWLSRNEY 378
WL + EY
Sbjct: 353 -KMWLGKKEY 361
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 180 bits (438), Expect = 2e-45
Identities = 121/384 (31%), Positives = 190/384 (49%), Gaps = 32/384 (8%)
Query: 10 VCDNGTGFVKCGFAGSNFPAFIFPSMVG---------RPIIRAENKIG-DIDVKDLMVGD 59
V DNGTG+ K G+AG+ P FI PS + +R N++G ID D +GD
Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGD 69
Query: 60 EA-SKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTK 118
EA S + V YP+ +G+V +W+ M W+ + +P++ LLTEPP+N +
Sbjct: 70 EALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIF-KYLRAEPEDHFFLLTEPPLNTPE 128
Query: 119 NREKMIEVMFEKYEFDSAYVAIQAVLTLYA--------QGLIXXXXXXXXXXXTHICPVY 170
NRE E+MFE + Y+A+QAVL L A + + TH PV
Sbjct: 129 NREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVA 188
Query: 171 EEFALPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQE 230
+ + + + + IAGRDIT ++ LL R + +E +M+KEK CY+ ++ +E
Sbjct: 189 DGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKE 248
Query: 231 -QRLALETTVLVEPYTLPDGRV-----IKVGGERFEAPEALFQPHLINVE-GQGIAELVF 283
+ + + Y + + VG ERF PE F P N E I++ +
Sbjct: 249 FVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTID 308
Query: 284 NTIQAADIDMRNELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFK-- 341
IQ ID+R LY++IVLSGGSTM+ +L+R++K+L R+ +E + K
Sbjct: 309 TLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPK 368
Query: 342 ---IRVEDPPRRKDMVFIGGAVLA 362
++V ++ V+ GG++LA
Sbjct: 369 PIDVQVISHKMQRYAVWFGGSMLA 392
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 91.9 bits (218), Expect = 7e-19
Identities = 85/344 (24%), Positives = 145/344 (42%), Gaps = 42/344 (12%)
Query: 9 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 68
I+ DNG +K G S P +V I++A++ + K + V E +
Sbjct: 6 IIFDNGGHNMKIGTIDSESPR-----LVPNSIVKAKH-----EKKRVFVAHEQEECSDKF 55
Query: 69 EVSY--PMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 126
+ Y P+E G V NW+ +W+ TFG M+V+ ++I LT+ + E+
Sbjct: 56 SLFYVRPIERGYVVNWDTQQQIWEKTFG--SMDVEASTSRIALTDNNYLIPALPDVSSEI 113
Query: 127 MFEKYEFDSAYVAIQAVLTLYAQGLIX----XXXXXXXXXXTHICPVYEEFALPHLTRRL 182
+F+ + F + + L I T + + R+
Sbjct: 114 LFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRI 173
Query: 183 DIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQ---EQRLALETTV 239
D+ G+ +T L + R N S + + KE LC++ N ++ E R +
Sbjct: 174 DVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENT 231
Query: 240 LVEPYTLPD------GRV-------------IKVGGERFEAPEALFQPHLINVEGQGIAE 280
++ Y +PD G V I +G ERF PE LF P I+++ G+AE
Sbjct: 232 TMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAE 291
Query: 281 LVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLPSRLEREIKQL 324
V +I +R L ++I++ GGS+ +PG RLERE++ +
Sbjct: 292 AVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSM 335
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 91.5 bits (217), Expect = 9e-19
Identities = 85/344 (24%), Positives = 145/344 (42%), Gaps = 42/344 (12%)
Query: 9 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 68
I+ DNG +K G S P +V I++A++ + K + V E +
Sbjct: 6 IIFDNGGHNMKIGTIDSESPR-----LVPNSIVKAKH-----EKKRVFVAHEQEECSDKF 55
Query: 69 EVSY--PMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 126
+ Y P+E G V NW+ +W+ TFG M+V+ ++I LT+ + E+
Sbjct: 56 SLFYVRPIERGYVVNWDTQQQIWEKTFG--SMDVEASTSRIALTDNNYLIPALPDVSSEI 113
Query: 127 MFEKYEFDSAYVAIQAVLTLYAQGLIX----XXXXXXXXXXTHICPVYEEFALPHLTRRL 182
+F+ + F + + L I T + + R+
Sbjct: 114 LFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRI 173
Query: 183 DIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQ---EQRLALETTV 239
D+ G+ +T L + R N S + + KE LC++ N ++ E R +
Sbjct: 174 DVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQGNT 231
Query: 240 LVEPYTLPD------GRV-------------IKVGGERFEAPEALFQPHLINVEGQGIAE 280
++ Y +PD G V I +G ERF PE LF P I+++ G+AE
Sbjct: 232 TMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAE 291
Query: 281 LVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLPSRLEREIKQL 324
V +I +R L ++I++ GGS+ +PG RLERE++ +
Sbjct: 292 AVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSM 335
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 82.2 bits (194), Expect = 6e-16
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 7/231 (3%)
Query: 97 KMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXX 156
++ V+P + K+LL+ P PT +++++ E +F SA + Q L LYA +
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYD-VTTGV 324
Query: 157 XXXXXXXTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADFETV 213
+I PV + + + + + + L L YAF + +
Sbjct: 325 VVDIGERVNIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 214 RMMKEKLCYIGYNIEQEQRLA-LETTVLVEPYTLPDGRVIK--VGGERFEAPEALFQPHL 270
R E+ Y+ + ++E++ ET + ++ +T G + + RF E LF+P
Sbjct: 385 RFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKK 444
Query: 271 INVEGQGIAELVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLPSRLEREI 321
++ +G+ +L+ I ID R LY++I L+GG+++ PG+ +LE+E+
Sbjct: 445 WGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQEL 495
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 81.8 bits (193), Expect = 7e-16
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDM 85
A R +L + YP+E+G+V NW+DM
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDM 83
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 81.8 bits (193), Expect = 7e-16
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDM 85
A R +L + YP+E+G+V NW+DM
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 81.4 bits (192), Expect = 1e-15
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDM 85
A R +L + YP+E+G+V NW+DM
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDM 83
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 81.4 bits (192), Expect = 1e-15
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 1 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 60
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 61 ASKLRSMLEVSYPMENGVVRNWEDM 85
A R +L + YP+E+G+V NW+DM
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 69.3 bits (162), Expect = 4e-12
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 9 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 68
+V D G+ + GFAG +P PS + ++ I+ ++ M + SK+++
Sbjct: 14 LVFDAGSQSFRVGFAGEEYPKGDIPSYIA---VQEALPDDTIEKQEAMEEGDNSKVQTKR 70
Query: 69 EVSY---------P---------MENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLT 110
E ++ P M+ G++ +WE + ++++ + + +P E +L +
Sbjct: 71 EKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSY-ENILYSNPSEHPVLFS 129
Query: 111 EPPMNPTKNREKMIEVMFEKYEFDSAYVAIQAVLTLYAQGLIXXXXXXXXXXXTHICPVY 170
E N REK+ E+MFEK++ + Y++ VL+ +AQG T + PV+
Sbjct: 130 ESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVF 189
Query: 171 EEFALPHLTRRLDIAGRDITRYLIKLL 197
+ +A+ H + I G IT L ++L
Sbjct: 190 DGYAVTHAVVKCPIGGDLITEQLAQML 216
Score = 57.2 bits (132), Expect = 2e-08
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 243 PYTLPDGRVIKVGGERFEAPEALFQPHLINVEGQ-----GIAELVFNTIQAADIDMRNEL 297
PY P+G + G ER + PE LF + EG+ +A++ + ADID+R L
Sbjct: 292 PYAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTL 351
Query: 298 YKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLRNECDKLSKFKI-RVEDPPRRKDMVFI 356
+ ++ ++GG+++ G R L L +C K ++ RK +I
Sbjct: 352 FSNVTVTGGNSLILGFTER---------LNYALATKCPPTIKLRVFAAPTQAERKYGAWI 402
Query: 357 GGAVLAEVCKNRDNFWLSRNEYLE 380
GG++L + W+S+ EY E
Sbjct: 403 GGSILGSL-GTFQQMWVSKAEYDE 425
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 248 DGRVIKVGGERFEAPEALFQPHLINVEGQGIA--ELVFNTIQAADIDMRNELYKHIVLSG 305
+G++ V FE +F +N ++ +L+ + ID+R +L+ +I+L+G
Sbjct: 158 NGKIFVVPPVVFETSTEIFFNENLNPTSFDLSLPKLLHKLVSKCPIDLRKKLFPNILLTG 217
Query: 306 GSTMYPGLPSRLEREIK 322
G + PGL RLE+EI+
Sbjct: 218 GVSTIPGLMKRLEQEIQ 234
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 33.1 bits (72), Expect = 0.34
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 197 LLLRGYAFNHSADFETVRMMKEKLCYIGYNIEQEQRLALETTVLVEPYTLPDGRVIKV-G 255
+LL G + HS + E L Y + E RL + L T P+ + + G
Sbjct: 170 MLLTGLTYLHSIRVTHRDLKPENLLYA--DSRPEARLLITDFGLAYQATKPNETMTETCG 227
Query: 256 GERFEAPEALFQ-PHLINVEGQG---IAELVFNTIQAADIDMRNELYKHIVLSGGSTMYP 311
+ APE L + P+ V+ IA ++ + I D D R+ LY HI+ + YP
Sbjct: 228 TPEYIAPELLLRVPYTQKVDMWAVGVIAYILMSGIMPFDDDCRSRLYTHII-TANYVYYP 286
Query: 312 GLPSRLEREIKQLYLERVLR-NECDKLS 338
S E+ + +++ +L N ++LS
Sbjct: 287 QFWS--GSELAKQFVDSLLETNSVERLS 312
>U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical
protein T19D7.6 protein.
Length = 156
Score = 32.7 bits (71), Expect = 0.45
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 287 QAADIDMRNELYKHIVLSG-GSTMYPGLPSRLEREIKQLYLE-RVLRNECDKLSKFKIRV 344
Q + I M+NE+ H+VLSG T P + I++L L+ VL + KF +
Sbjct: 13 QNSPISMKNEINSHVVLSGLCLTSIPSTVLKNRTRIEKLTLDNNVLTENSFNMPKF-ANL 71
Query: 345 EDPPRRKDMVFIGGAVLAEVCKNRDNFWLSR 375
++ R + + G +LA + KN N + R
Sbjct: 72 KELSVRNNKIRNLGVLLANIQKNCPNIEVLR 102
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
protein F09C3.1 protein.
Length = 1391
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 28 PAFIFPSMVGRPIIRAENKIGDIDVKDLMVG 58
P ++ ++ GRP+ AE + D DV D++ G
Sbjct: 887 PVDLYMNLYGRPVESAEKALQDTDVSDVLSG 917
>AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical
protein C09D4.4c protein.
Length = 916
Score = 29.1 bits (62), Expect = 5.6
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 256 GERFEAPEALFQPHLINV-EGQGIAELVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLP 314
G+R P+ L +V +G +++ V T Q ++ + + HI + ST+ P
Sbjct: 52 GDRDTGPKTSSNILLAHVYQGAAVSKTVEVTYQHEKFNLDD--WFHISVQFNSTLNLCEP 109
Query: 315 SRLEREIKQLYLERVLRNECDKLSKFKIRVEDPP 348
+LE EI+ LY++R + + K R+ + P
Sbjct: 110 QKLEIEIELLYMDRYHPPQYESFVKITKRIVEIP 143
>AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical
protein C09D4.4b protein.
Length = 915
Score = 29.1 bits (62), Expect = 5.6
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 256 GERFEAPEALFQPHLINV-EGQGIAELVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLP 314
G+R P+ L +V +G +++ V T Q ++ + + HI + ST+ P
Sbjct: 52 GDRDTGPKTSSNILLAHVYQGAAVSKTVEVTYQHEKFNLDD--WFHISVQFNSTLNLCEP 109
Query: 315 SRLEREIKQLYLERVLRNECDKLSKFKIRVEDPP 348
+LE EI+ LY++R + + K R+ + P
Sbjct: 110 QKLEIEIELLYMDRYHPPQYESFVKITKRIVEIP 143
>AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical
protein C09D4.4a protein.
Length = 913
Score = 29.1 bits (62), Expect = 5.6
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 256 GERFEAPEALFQPHLINV-EGQGIAELVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLP 314
G+R P+ L +V +G +++ V T Q ++ + + HI + ST+ P
Sbjct: 52 GDRDTGPKTSSNILLAHVYQGAAVSKTVEVTYQHEKFNLDD--WFHISVQFNSTLNLCEP 109
Query: 315 SRLEREIKQLYLERVLRNECDKLSKFKIRVEDPP 348
+LE EI+ LY++R + + K R+ + P
Sbjct: 110 QKLEIEIELLYMDRYHPPQYESFVKITKRIVEIP 143
>AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical
protein Y116A8C.5 protein.
Length = 675
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 71 SYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEK 130
S+P + + H +TF P M++ T++ LT + R K +E + +
Sbjct: 493 SFPDYANIAFTSNTLAHEMGHTFSPHLMDIMTGTTEVWLTPKETEEYEKRVKCLEDQYTE 552
Query: 131 YE 132
Y+
Sbjct: 553 YD 554
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.139 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,539,176
Number of Sequences: 27539
Number of extensions: 390107
Number of successful extensions: 948
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 873
Number of HSP's gapped (non-prelim): 34
length of query: 388
length of database: 12,573,161
effective HSP length: 83
effective length of query: 305
effective length of database: 10,287,424
effective search space: 3137664320
effective search space used: 3137664320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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