Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000081-TA|BGIBMGA000081-PA|IPR003958|Transcription
factor CBF/NF-Y/archaeal histone, IPR009072|Histone-fold
(119 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 68 2e-12
08_01_0498 - 4327502-4328395 67 4e-12
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 67 4e-12
03_04_0055 + 16891212-16891848,16893166-16893206 66 5e-12
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 65 2e-11
09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439 64 3e-11
02_05_0591 - 30183105-30183869 64 3e-11
01_07_0092 - 41021743-41022276 64 3e-11
01_07_0091 - 41013837-41014271 61 3e-10
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 60 5e-10
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 56 8e-09
06_01_1181 + 10148653-10149405 54 3e-08
02_05_0592 - 30210219-30210757,30210898-30210919 46 6e-06
09_04_0535 + 18397051-18397644 32 0.11
03_02_0380 - 7945959-7946699 32 0.11
02_01_0529 - 3846489-3847268 32 0.14
08_01_0702 - 6205731-6206516,6207521-6207549,6208135-6208150 31 0.24
06_03_1057 + 27248249-27249001 31 0.24
10_02_0162 + 6054823-6055830 30 0.57
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 28 2.3
08_02_1128 + 24510735-24511055 27 4.0
07_03_1602 + 28068628-28068771,28069779-28070176,28070768-280710... 27 5.3
07_03_0823 + 21765960-21766064,21766166-21766327,21766616-217667... 27 5.3
04_04_1632 - 34926955-34927332 27 5.3
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 26 7.0
05_03_0410 + 13616708-13617691 26 7.0
03_05_0983 - 29402261-29402436,29402711-29402855,29402941-294030... 26 9.2
03_03_0059 + 14149796-14150350,14152303-14152433,14153479-141535... 26 9.2
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 67.7 bits (158), Expect = 2e-12
Identities = 31/87 (35%), Positives = 57/87 (65%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ ++RI+K+A+P+ I+K+A+ L + S F+ +VTS A++ + +KRK +
Sbjct: 21 QDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTIN 80
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G+D++ AM + F+ +V+PL L Y
Sbjct: 81 GEDLLFAMGTLGFEEYVDPLKIYLHKY 107
>08_01_0498 - 4327502-4328395
Length = 297
Score = 66.9 bits (156), Expect = 4e-12
Identities = 32/89 (35%), Positives = 54/89 (60%)
Query: 4 KLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKA 63
K +D LP+ V+RI+K +LP+ ISKE++ + + S F+ +VT A++ + +KRK
Sbjct: 57 KEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEASDKCQREKRKT 116
Query: 64 LTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
+ G D++ AM + F+ +V PL L Y
Sbjct: 117 INGDDLLWAMTTLGFEAYVGPLKSYLNRY 145
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 66.9 bits (156), Expect = 4e-12
Identities = 29/87 (33%), Positives = 57/87 (65%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ ++RI+K+A+P+ I+K+A+ + + S F+ ++TS A++ + +KRK +
Sbjct: 39 QDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN 98
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ ++EPL L+ Y
Sbjct: 99 GDDLLWAMATLGFEDYIEPLKVYLQKY 125
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 66.5 bits (155), Expect = 5e-12
Identities = 30/87 (34%), Positives = 55/87 (63%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ V+RI+K+ALP+ ISK+A+ + + S F+ ++T A++ + +KRK +
Sbjct: 25 QDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTIN 84
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ +V+PL L +
Sbjct: 85 GDDLLWAMTTLGFEDYVDPLKHYLHKF 111
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 64.9 bits (151), Expect = 2e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ V+RI+K ALP+ ISK+A+ + + S F+ ++T A++ + +KRK +
Sbjct: 23 QDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTIN 82
Query: 66 GQDVIDAMKDIEFDRFVEPL 85
G D++ AM + F+ +++PL
Sbjct: 83 GDDLLWAMTTLGFEDYIDPL 102
>09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439
Length = 167
Score = 64.1 bits (149), Expect = 3e-11
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALP------SGVSISKEARTGLAKAASVFVLYVTSAATN 54
MAE E LP +V R+VKE L + V ++K+A + A++A +F+ Y+++ A +
Sbjct: 28 MAEA-EVEELPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATAND 86
Query: 55 IVKNKKRKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
+ K KR+ + DV+ A+ ++EF FVEPL +L+ +
Sbjct: 87 MCKESKRQTINADDVLKALDEMEFPEFVEPLNTSLQEF 124
>02_05_0591 - 30183105-30183869
Length = 254
Score = 64.1 bits (149), Expect = 3e-11
Identities = 29/87 (33%), Positives = 51/87 (58%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D +P+ V RI++ LP+ IS +A+ + + S ++ ++T A + ++RK +T
Sbjct: 33 QDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTIT 92
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
+DV+ AM + FD +VEPLG L Y
Sbjct: 93 AEDVLWAMSRLGFDDYVEPLGVYLHRY 119
>01_07_0092 - 41021743-41022276
Length = 177
Score = 64.1 bits (149), Expect = 3e-11
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 4 KLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKA 63
K +D LP+ V RI+K+ LP ISKEA+ + + S F+ +VT A++ +KRK
Sbjct: 33 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKT 92
Query: 64 LTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
+ G DV A + FD +V+P+ L Y
Sbjct: 93 VNGDDVCWAFGALGFDDYVDPMRRYLNKY 121
>01_07_0091 - 41013837-41014271
Length = 144
Score = 60.9 bits (141), Expect = 3e-10
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ V RI+K+ LP ISK A+ + + A+ F+ +VT A+ + ++RK +
Sbjct: 5 QDNLLPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVTGEASERCRRERRKTVN 64
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G DV AM+ + D + + + L+ Y
Sbjct: 65 GDDVCHAMRSLGLDHYADAMHRYLQRY 91
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 60.1 bits (139), Expect = 5e-10
Identities = 29/89 (32%), Positives = 53/89 (59%)
Query: 4 KLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKA 63
K +D LP+ + RI++ A+P I+K+++ + + S F+ ++TS A++ +KRK
Sbjct: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
Query: 64 LTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
+ G D+I +M + F+ +VEPL L Y
Sbjct: 81 INGDDLIWSMGTLGFEDYVEPLKLYLRLY 109
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 56.0 bits (129), Expect = 8e-09
Identities = 23/87 (26%), Positives = 52/87 (59%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
ED++LP + + +I+KE LP V ++++A+ L + F+ ++S + + + +K +
Sbjct: 12 EDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREDKKTIA 71
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
+ V+ A++D+ F ++E + A EH+
Sbjct: 72 PEHVLRALQDLGFREYIEEVQAAYEHH 98
>06_01_1181 + 10148653-10149405
Length = 250
Score = 54.0 bits (124), Expect = 3e-08
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D +P+ V RI++ LP IS +A+ + + S F+ +VT A + + RK +T
Sbjct: 32 QDRLMPIANVIRIMRRVLPPHAKISDDAKEVIQECVSEFISFVTGEANDRCHREHRKTVT 91
Query: 66 GQDVIDAMKDIEFDRFVEPL 85
+D++ AM + FD +V PL
Sbjct: 92 AEDLVWAMDRLGFDDYVPPL 111
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 46.4 bits (105), Expect = 6e-06
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDV 69
LP+ + R++K+ LP I A+ A FV +V A+ K + R+ + +D
Sbjct: 34 LPMANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDY 93
Query: 70 IDAMKDIEFDRFVEPLGEALEHY 92
+ + D+ FDR+V+P+ + Y
Sbjct: 94 LGSFGDLGFDRYVDPMDAYIHGY 116
>09_04_0535 + 18397051-18397644
Length = 197
Score = 32.3 bits (70), Expect = 0.11
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
NLPL + +I+K A I+ EA A+A +F+L +T + KR+ L D
Sbjct: 81 NLPLARIKKIMK-ADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSD 139
Query: 69 VIDAMKDIE-FDRFVE 83
+ A+ E FD V+
Sbjct: 140 IAAAIARTEVFDFLVD 155
>03_02_0380 - 7945959-7946699
Length = 246
Score = 32.3 bits (70), Expect = 0.11
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 2 AEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKR 61
A ++ LPL + +I+K A IS EA AKA +F+L +T + + KR
Sbjct: 62 ASDFKNHQLPLARIKKIMK-ADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKR 120
Query: 62 KALTGQDVIDAMKDIE-FDRFVE--PLGEALE 90
+ L DV A+ + FD V+ P EA E
Sbjct: 121 RTLQRNDVAAAIARTDVFDFLVDIVPREEAKE 152
>02_01_0529 - 3846489-3847268
Length = 259
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA AKA VF+L +T + + KR+ L D
Sbjct: 105 SLPLARIKKIMK-ADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKND 163
Query: 69 VIDAM 73
+ A+
Sbjct: 164 IAAAI 168
>08_01_0702 - 6205731-6206516,6207521-6207549,6208135-6208150
Length = 276
Score = 31.1 bits (67), Expect = 0.24
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
NLPL + +I+K A I+ EA AKA +F+L +T + + +R+ L D
Sbjct: 127 NLPLARIKKIMK-ADEDVKMIAGEAPALFAKACEMFILDMTLRSWQHTEEGRRRTLQRSD 185
Query: 69 VIDAMKDIE-FDRFVE 83
V +K + FD V+
Sbjct: 186 VEAVIKKTDIFDFLVD 201
>06_03_1057 + 27248249-27249001
Length = 250
Score = 31.1 bits (67), Expect = 0.24
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA AKA +F+L +T + + KR+ L D
Sbjct: 101 SLPLARIKKIMK-ADEDVRMISAEAPVIFAKACEIFILELTLRSWMHTEENKRRTLQKND 159
Query: 69 VIDAM 73
+ A+
Sbjct: 160 IAAAI 164
>10_02_0162 + 6054823-6055830
Length = 335
Score = 29.9 bits (64), Expect = 0.57
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
E+L LP++ V I+ A G+ +S + + K +FV + A + R+ +
Sbjct: 49 EELILPISRVKNII-HAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIIL 107
Query: 66 GQDVIDAMKDIEFDRFV 82
G D+ +A+ E F+
Sbjct: 108 GTDIAEAITTTESYHFL 124
>02_04_0625 -
24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 49 TSAATNIVKNKKRKALTGQDVIDAMKD 75
+ A+T KNKK KA + DV+DA+ +
Sbjct: 908 SGASTTAKKNKKEKADSSNDVLDAIPE 934
>08_02_1128 + 24510735-24511055
Length = 106
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 29 ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIE-FDRFVE 83
I+ EA A+A +F+L +T + KR+ L D+ A+ E FD V+
Sbjct: 10 IAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVD 65
>07_03_1602 +
28068628-28068771,28069779-28070176,28070768-28071032,
28071101-28071174,28071247-28071346
Length = 326
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 14 VVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVT 49
V+ + E S V+I + RTGL A+ F++Y T
Sbjct: 55 VLDNLYGEIAKSVVTIKRYNRTGLVNFATGFIIYAT 90
>07_03_0823 +
21765960-21766064,21766166-21766327,21766616-21766741,
21766831-21766956,21767519-21767698,21768204-21768452
Length = 315
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 34 RTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIE 77
R LAK A + + +IV+N K +A T +D++DA+ +E
Sbjct: 141 RNLLAKGAFAAQM-IDLGLPHIVQNLKAQAWTDEDLLDALNQLE 183
>04_04_1632 - 34926955-34927332
Length = 125
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 29 ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIE-FDRFVE 83
IS EA +KA +F+ +T A KR+ + +DV A+++ + FD V+
Sbjct: 56 ISGEAPVVFSKACELFIAELTRRAWAATLEGKRRTVHKEDVAAAVQNTDLFDFLVD 111
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEA 33
+ P +VTR VKEA SG I++ A
Sbjct: 292 SFPAPIVTRTVKEAFRSGGGIAERA 316
>05_03_0410 + 13616708-13617691
Length = 327
Score = 26.2 bits (55), Expect = 7.0
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDV 69
LP+ V +++ + +S + T + K +FV +T A + R + G D+
Sbjct: 53 LPIDCVKNVIRPK-NDAMMLSADTPTFVTKLCELFVQELTLRAWVCANSHNRDIILGTDI 111
Query: 70 IDAMKDIEFDRFV 82
+A+ E F+
Sbjct: 112 AEAITTTESYHFL 124
>03_05_0983 -
29402261-29402436,29402711-29402855,29402941-29403063,
29403280-29403579
Length = 247
Score = 25.8 bits (54), Expect = 9.2
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 15 VTRIVKEALPSGVSISKEARTGLAKAASVFVL-YVTSAATNIVKNKKRKALTGQDVIDAM 73
V ++ +L +KEA + AA V V + T + ++ + + T V+ A
Sbjct: 73 VLQLANGSLLDACGKAKEASASASYAADVGAPPEVAARLTAVAQDLELRQRTALGVLGAA 132
Query: 74 KDIEFDRFVEPLGEALEHY 92
+ E D+F+E E L Y
Sbjct: 133 TEPELDQFMEAYHEMLVKY 151
>03_03_0059 +
14149796-14150350,14152303-14152433,14153479-14153520,
14153632-14153740,14154262-14154340,14154437-14154733,
14154820-14154932,14155375-14155482,14155554-14155616,
14155698-14155865,14156283-14156348
Length = 576
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/68 (23%), Positives = 31/68 (45%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
E++ LPL ++ + A S S+ + A LAK + +Y ++ K +T
Sbjct: 413 EEVKLPLDMIIYRLMRAYISSSSLRRAALRALAKTLTTDQIYYLREQFELIGPNKSDLIT 472
Query: 66 GQDVIDAM 73
Q++ A+
Sbjct: 473 LQNLKTAL 480
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.131 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,088,588
Number of Sequences: 37544
Number of extensions: 59617
Number of successful extensions: 216
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 192
Number of HSP's gapped (non-prelim): 28
length of query: 119
length of database: 14,793,348
effective HSP length: 73
effective length of query: 46
effective length of database: 12,052,636
effective search space: 554421256
effective search space used: 554421256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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