Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000081-TA|BGIBMGA000081-PA|IPR003958|Transcription
factor CBF/NF-Y/archaeal histone, IPR009072|Histone-fold
(119 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY720898-1|AAU15052.1| 147|Homo sapiens arsenic transactivated ... 122 2e-28
AK074782-1|BAC11206.1| 147|Homo sapiens protein ( Homo sapiens ... 122 2e-28
DQ072116-1|AAY57326.1| 147|Homo sapiens polymerase (DNA directe... 120 1e-27
BC004170-1|AAH04170.1| 147|Homo sapiens polymerase (DNA directe... 120 1e-27
BC003166-1|AAH03166.1| 147|Homo sapiens polymerase (DNA directe... 120 1e-27
AL137066-5|CAH70100.1| 147|Homo sapiens polymerase (DNA directe... 120 1e-27
AK074629-1|BAC11099.1| 147|Homo sapiens protein ( Homo sapiens ... 120 1e-27
AF261689-1|AAF90133.1| 147|Homo sapiens DNA polymerase epsilon ... 120 1e-27
AF226077-1|AAF72417.1| 147|Homo sapiens CHRAC17 protein. 120 1e-27
AK074762-1|BAC11190.1| 147|Homo sapiens protein ( Homo sapiens ... 119 2e-27
X59710-1|CAA42230.1| 205|Homo sapiens CAAT-box DNA binding prot... 69 5e-12
L06145-1|AAA59930.1| 207|Homo sapiens CCAAT-box DNA binding pro... 69 5e-12
BC007035-1|AAH07035.1| 207|Homo sapiens nuclear transcription f... 69 5e-12
BC005317-1|AAH05317.1| 207|Homo sapiens nuclear transcription f... 69 5e-12
BC005316-1|AAH05316.1| 207|Homo sapiens nuclear transcription f... 69 5e-12
M97388-1|AAA58442.1| 176|Homo sapiens TATA binding protein-asso... 50 1e-06
BT006972-1|AAP35618.1| 176|Homo sapiens down-regulator of trans... 50 1e-06
BC068553-1|AAH68553.1| 176|Homo sapiens DR1 protein protein. 50 1e-06
BC035507-1|AAH35507.1| 176|Homo sapiens down-regulator of trans... 50 1e-06
BC002809-1|AAH02809.1| 176|Homo sapiens down-regulator of trans... 50 1e-06
AL137159-1|CAC17578.1| 176|Homo sapiens down-regulator of trans... 50 1e-06
AK223442-1|BAD97162.1| 176|Homo sapiens down-regulator of trans... 50 1e-06
D89986-1|BAA14051.1| 335|Homo sapiens HSM-2 protein. 38 0.011
Z74792-1|CAA99055.1| 335|Homo sapiens CCAAT transcription bindi... 36 0.025
U78774-1|AAC51669.1| 335|Homo sapiens NFY-C protein. 36 0.043
U62296-1|AAC50816.1| 335|Homo sapiens transcription factor NF-Y... 36 0.043
D85425-1|BAA12818.1| 335|Homo sapiens transactivator HSM-1 prot... 36 0.043
BT020081-1|AAV38884.1| 335|Homo sapiens nuclear transcription f... 36 0.043
BC005003-1|AAH05003.1| 335|Homo sapiens nuclear transcription f... 36 0.043
AL354914-7|CAI16536.1| 313|Homo sapiens nuclear transcription f... 36 0.043
AL354914-6|CAI16535.1| 254|Homo sapiens nuclear transcription f... 36 0.043
AL354914-5|CAI16534.1| 129|Homo sapiens nuclear transcription f... 36 0.043
AL354914-4|CAI16533.1| 458|Homo sapiens nuclear transcription f... 36 0.043
AL354914-3|CAI16531.1| 335|Homo sapiens nuclear transcription f... 36 0.043
AL354914-2|CAI16530.1| 439|Homo sapiens nuclear transcription f... 36 0.043
AL354914-1|CAI16532.1| 301|Homo sapiens nuclear transcription f... 36 0.043
AK000346-1|BAA91100.1| 439|Homo sapiens protein ( Homo sapiens ... 36 0.043
AF191744-1|AAG28389.1| 458|Homo sapiens NFY-C variant DS2.8 pro... 36 0.043
AB208975-1|BAD92212.1| 378|Homo sapiens nuclear transcription f... 36 0.043
BC015891-1|AAH15891.1| 131|Homo sapiens chromatin accessibility... 35 0.057
AK023537-1|BAB14601.1| 131|Homo sapiens protein ( Homo sapiens ... 35 0.057
AF226076-1|AAF72416.1| 131|Homo sapiens CHRAC15 protein. 35 0.057
BC031331-1|AAH31331.1| 117|Homo sapiens polymerase (DNA-directe... 34 0.13
AF261688-1|AAF90132.1| 117|Homo sapiens DNA polymerase epsilon ... 34 0.13
AC007400-1|AAY15030.1| 117|Homo sapiens unknown protein. 34 0.13
M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit... 28 8.6
BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+ transp... 28 8.6
>AY720898-1|AAU15052.1| 147|Homo sapiens arsenic transactivated
protein protein.
Length = 147
Score = 122 bits (295), Expect = 2e-28
Identities = 59/92 (64%), Positives = 71/92 (77%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMNGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>AK074782-1|BAC11206.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90301 fis, clone NT2RP2000610, weakly similar
to CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A. ).
Length = 147
Score = 122 bits (295), Expect = 2e-28
Identities = 59/92 (64%), Positives = 71/92 (77%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMNGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>DQ072116-1|AAY57326.1| 147|Homo sapiens polymerase (DNA
directed), epsilon 3 (p17 subunit) protein.
Length = 147
Score = 120 bits (289), Expect = 1e-27
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>BC004170-1|AAH04170.1| 147|Homo sapiens polymerase (DNA
directed), epsilon 3 (p17 subunit) protein.
Length = 147
Score = 120 bits (289), Expect = 1e-27
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>BC003166-1|AAH03166.1| 147|Homo sapiens polymerase (DNA
directed), epsilon 3 (p17 subunit) protein.
Length = 147
Score = 120 bits (289), Expect = 1e-27
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>AL137066-5|CAH70100.1| 147|Homo sapiens polymerase (DNA
directed), epsilon 3 (p17 subunit) protein.
Length = 147
Score = 120 bits (289), Expect = 1e-27
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>AK074629-1|BAC11099.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90148 fis, clone HEMBB1001959, weakly similar
to CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A. ).
Length = 147
Score = 120 bits (289), Expect = 1e-27
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>AF261689-1|AAF90133.1| 147|Homo sapiens DNA polymerase epsilon
p17 subunit protein.
Length = 147
Score = 120 bits (289), Expect = 1e-27
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>AF226077-1|AAF72417.1| 147|Homo sapiens CHRAC17 protein.
Length = 147
Score = 120 bits (289), Expect = 1e-27
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAY 92
>AK074762-1|BAC11190.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90281 fis, clone NT2RP1000468, weakly similar
to CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A . ).
Length = 147
Score = 119 bits (287), Expect = 2e-27
Identities = 58/92 (63%), Positives = 70/92 (76%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
MAE+ EDLNLP V+TRI+KEALP GV+ISKEAR+ +++AASVFVLY TS A N K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK L DV+ AM+++EF RFV PL EALE Y
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVIPLKEALEAY 92
>X59710-1|CAA42230.1| 205|Homo sapiens CAAT-box DNA binding protein
subunit B (NF-YB) protein.
Length = 205
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D+ LP+ V RI+K A+P I+K+A+ + + S F+ ++TS A+ +KRK +
Sbjct: 53 QDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTIN 112
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G+D++ AM + FD +VEPL L+ +
Sbjct: 113 GEDILFAMSTLGFDSYVEPLKLYLQKF 139
>L06145-1|AAA59930.1| 207|Homo sapiens CCAAT-box DNA binding
protein subunit NF-YB. protein.
Length = 207
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D+ LP+ V RI+K A+P I+K+A+ + + S F+ ++TS A+ +KRK +
Sbjct: 55 QDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTIN 114
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G+D++ AM + FD +VEPL L+ +
Sbjct: 115 GEDILFAMSTLGFDSYVEPLKLYLQKF 141
>BC007035-1|AAH07035.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D+ LP+ V RI+K A+P I+K+A+ + + S F+ ++TS A+ +KRK +
Sbjct: 55 QDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTIN 114
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G+D++ AM + FD +VEPL L+ +
Sbjct: 115 GEDILFAMSTLGFDSYVEPLKLYLQKF 141
>BC005317-1|AAH05317.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D+ LP+ V RI+K A+P I+K+A+ + + S F+ ++TS A+ +KRK +
Sbjct: 55 QDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTIN 114
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G+D++ AM + FD +VEPL L+ +
Sbjct: 115 GEDILFAMSTLGFDSYVEPLKLYLQKF 141
>BC005316-1|AAH05316.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D+ LP+ V RI+K A+P I+K+A+ + + S F+ ++TS A+ +KRK +
Sbjct: 55 QDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTIN 114
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G+D++ AM + FD +VEPL L+ +
Sbjct: 115 GEDILFAMSTLGFDSYVEPLKLYLQKF 141
>M97388-1|AAA58442.1| 176|Homo sapiens TATA binding
protein-associated phosphoprotein protein.
Length = 176
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+DL +P + +++KE LP+ V ++ +AR + + F+ ++S A I ++K ++
Sbjct: 9 DDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALE 90
+ VI A++ + F ++ + E L+
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQ 92
>BT006972-1|AAP35618.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+DL +P + +++KE LP+ V ++ +AR + + F+ ++S A I ++K ++
Sbjct: 9 DDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALE 90
+ VI A++ + F ++ + E L+
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQ 92
>BC068553-1|AAH68553.1| 176|Homo sapiens DR1 protein protein.
Length = 176
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+DL +P + +++KE LP+ V ++ +AR + + F+ ++S A I ++K ++
Sbjct: 9 DDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALE 90
+ VI A++ + F ++ + E L+
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQ 92
>BC035507-1|AAH35507.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+DL +P + +++KE LP+ V ++ +AR + + F+ ++S A I ++K ++
Sbjct: 9 DDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALE 90
+ VI A++ + F ++ + E L+
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQ 92
>BC002809-1|AAH02809.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+DL +P + +++KE LP+ V ++ +AR + + F+ ++S A I ++K ++
Sbjct: 9 DDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALE 90
+ VI A++ + F ++ + E L+
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQ 92
>AL137159-1|CAC17578.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+DL +P + +++KE LP+ V ++ +AR + + F+ ++S A I ++K ++
Sbjct: 9 DDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALE 90
+ VI A++ + F ++ + E L+
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQ 92
>AK223442-1|BAD97162.1| 176|Homo sapiens down-regulator of
transcription 1 variant protein.
Length = 176
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+DL +P + +++KE LP+ V ++ +AR + + F+ ++S A I ++K ++
Sbjct: 9 DDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALE 90
+ VI A++ + F ++ + E L+
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQ 92
>D89986-1|BAA14051.1| 335|Homo sapiens HSM-2 protein.
Length = 335
Score = 37.5 bits (83), Expect = 0.011
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A +N KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTENNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>Z74792-1|CAA99055.1| 335|Homo sapiens CCAAT transcription binding
factor, gamma subunit protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.025
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIIK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>U78774-1|AAC51669.1| 335|Homo sapiens NFY-C protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>U62296-1|AAC50816.1| 335|Homo sapiens transcription factor NF-YC
subunit protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>D85425-1|BAA12818.1| 335|Homo sapiens transactivator HSM-1
protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>BT020081-1|AAV38884.1| 335|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>BC005003-1|AAH05003.1| 335|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AL354914-7|CAI16536.1| 313|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 313
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AL354914-6|CAI16535.1| 254|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 254
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AL354914-5|CAI16534.1| 129|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 129
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AL354914-4|CAI16533.1| 458|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 458
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AL354914-3|CAI16531.1| 335|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AL354914-2|CAI16530.1| 439|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 439
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AL354914-1|CAI16532.1| 301|Homo sapiens nuclear transcription
factor Y, gamma protein.
Length = 301
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AK000346-1|BAA91100.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ20339 fis, clone HEP12350. ).
Length = 439
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AF191744-1|AAG28389.1| 458|Homo sapiens NFY-C variant DS2.8
protein.
Length = 458
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 43 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 100
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 101 I--AMAITKFDQF 111
>AB208975-1|BAD92212.1| 378|Homo sapiens nuclear transcription
factor Y, gamma variant protein.
Length = 378
Score = 35.5 bits (78), Expect = 0.043
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 10 LPLTVVTRIVKEALPSGVS-ISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
LPL + +I+K L V IS EA AKAA +F+ +T A ++ KR+ L D
Sbjct: 87 LPLARIKKIMK--LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRND 144
Query: 69 VIDAMKDIEFDRF 81
+ AM +FD+F
Sbjct: 145 I--AMAITKFDQF 155
>BC015891-1|AAH15891.1| 131|Homo sapiens chromatin accessibility
complex 1 protein.
Length = 131
Score = 35.1 bits (77), Expect = 0.057
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 8 LNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQ 67
++LPL+ + R++ ++ P SI++EA AKA +FV + + + K++K LT
Sbjct: 17 ISLPLSRI-RVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYS 75
Query: 68 DVIDAMKDIEFDRFV 82
D+ + + E +F+
Sbjct: 76 DLANTAQQSETFQFL 90
>AK023537-1|BAB14601.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ13475 fis, clone PLACE1003605. ).
Length = 131
Score = 35.1 bits (77), Expect = 0.057
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 8 LNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQ 67
++LPL+ + R++ ++ P SI++EA AKA +FV + + + K++K LT
Sbjct: 17 ISLPLSRI-RVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYS 75
Query: 68 DVIDAMKDIEFDRFV 82
D+ + + E +F+
Sbjct: 76 DLANTAQQSETFQFL 90
>AF226076-1|AAF72416.1| 131|Homo sapiens CHRAC15 protein.
Length = 131
Score = 35.1 bits (77), Expect = 0.057
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 8 LNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQ 67
++LPL+ + R++ ++ P SI++EA AKA +FV + + + K++K LT
Sbjct: 17 ISLPLSRI-RVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYS 75
Query: 68 DVIDAMKDIEFDRFV 82
D+ + + E +F+
Sbjct: 76 DLANTAQQSETFQFL 90
>BC031331-1|AAH31331.1| 117|Homo sapiens polymerase (DNA-directed),
epsilon 4 (p12 subunit) protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDV 69
LPL V +VK A P +EA LA+AA +FV + A + KRK L +D+
Sbjct: 41 LPLARVKALVK-ADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDL 99
Query: 70 IDAMKDIEFDRFVE 83
+A++ ++ F+E
Sbjct: 100 DNAIEAVDEFAFLE 113
>AF261688-1|AAF90132.1| 117|Homo sapiens DNA polymerase epsilon p12
subunit protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDV 69
LPL V +VK A P +EA LA+AA +FV + A + KRK L +D+
Sbjct: 41 LPLARVKALVK-ADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDL 99
Query: 70 IDAMKDIEFDRFVE 83
+A++ ++ F+E
Sbjct: 100 DNAIEAVDEFAFLE 113
>AC007400-1|AAY15030.1| 117|Homo sapiens unknown protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDV 69
LPL V +VK A P +EA LA+AA +FV + A + KRK L +D+
Sbjct: 41 LPLARVKALVK-ADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDL 99
Query: 70 IDAMKDIEFDRFVE 83
+A++ ++ F+E
Sbjct: 100 DNAIEAVDEFAFLE 113
>M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit
precursor protein.
Length = 529
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 37 LAKAASVFVLYVTSAATNIVKNKKRKALTGQ--DVIDAMKDIEFDRFVEPLGEALE 90
L +AA V V A + K A TG+ VI A+ D++FD + P+ ALE
Sbjct: 32 LLRAAPTAVHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALE 87
>BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, beta
polypeptide protein.
Length = 529
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 37 LAKAASVFVLYVTSAATNIVKNKKRKALTGQ--DVIDAMKDIEFDRFVEPLGEALE 90
L +AA V V A + K A TG+ VI A+ D++FD + P+ ALE
Sbjct: 32 LLRAAPTAVHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALE 87
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.131 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,076,181
Number of Sequences: 224733
Number of extensions: 260005
Number of successful extensions: 788
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 47
length of query: 119
length of database: 73,234,838
effective HSP length: 81
effective length of query: 38
effective length of database: 55,031,465
effective search space: 2091195670
effective search space used: 2091195670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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