Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000078-TA|BGIBMGA000078-PA|IPR012496|TMC
(612 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 128 3e-31
AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 69 3e-13
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 50 1e-07
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 26 2.5
AY391746-1|AAR28996.1| 502|Anopheles gambiae putative GPCR prot... 25 4.4
AY391745-1|AAR28995.1| 460|Anopheles gambiae putative GPCR prot... 25 4.4
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 25 4.4
AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transpor... 25 5.9
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 128 bits (310), Expect = 3e-31
Identities = 56/134 (41%), Positives = 85/134 (63%)
Query: 283 TKLFYNMPMAYILVPISWTLLSLIAIVKTAARGFKQKLIESEGQFYKYCNLVFGGWDFCI 342
T L+Y++P+ Y+++ + +++L+AI++ R FK ++ E EG FY+YCNLVFGGWDFCI
Sbjct: 44 TILYYDLPLVYVIIIAIYYIITLVAIMRAVVRQFKDRIAEGEGLFYQYCNLVFGGWDFCI 103
Query: 343 HNDRSARIKHQALYNEIKGCIEEERIKEEKQSRSRESQILMHLKRXXXXXXXXXXXXASG 402
HN +SA IKH+AL+NEIK + ++R + E+ +RSRE + + R +
Sbjct: 104 HNQKSADIKHRALHNEIKSLLYQKRFEHERNNRSREFMLKLIAIRMLVNLVVFVILLLAA 163
Query: 403 FLIYVAFNFSTERL 416
IYV FN S L
Sbjct: 164 ITIYVLFNVSLAEL 177
Score = 109 bits (262), Expect = 2e-25
Identities = 44/74 (59%), Positives = 54/74 (72%)
Query: 525 ECWETYVGQQFYKLILTDFAVQFVTTFLINLPRAFMARHTRSRCLKMFGEQEFYLPKHVL 584
+CWET+VGQQFYKL + DFA F+ TF +N PRA ARH+ SR K GEQEF L KHVL
Sbjct: 384 QCWETFVGQQFYKLFIVDFATHFLVTFFVNFPRALFARHSSSRLAKFIGEQEFELSKHVL 443
Query: 585 DIVYVQTIIWMAMF 598
D++Y QT+ W+ F
Sbjct: 444 DVIYSQTLCWLGTF 457
Score = 47.6 bits (108), Expect = 1e-06
Identities = 16/37 (43%), Positives = 29/37 (78%)
Query: 441 QLENVLMEFLPFICIVVLNLIIPEIFSYMIRYEGYMP 477
+L + EFLP++ IV +NL++P++F+Y+++YE Y P
Sbjct: 260 KLRVLFYEFLPYLAIVCMNLVVPQLFNYLVQYEKYSP 296
>AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein
protein.
Length = 814
Score = 69.3 bits (162), Expect = 3e-13
Identities = 73/302 (24%), Positives = 140/302 (46%), Gaps = 35/302 (11%)
Query: 97 ENLSNEERSWEEIMQ-IKALPVPMSQKIELKARLQNATKLRLQGFEQLHLRQR---KVWH 152
+ L + R +E++Q +K P+ M +K+ L + ++ R +G Q H R +
Sbjct: 49 DKLFDTIRLHKEVLQTVKLQPISMKRKLRLVQQAKSYIT-RHEGALQEHFTSRTARSLLA 107
Query: 153 RFRIGCTETFSKL--EL---------WQTPMREIEGKFGTGVVSYXXXXXXXXXXXXTIS 201
+F I T + +L EL W++ ++EIE FG+ V SY IS
Sbjct: 108 QFNIFLTTKWQQLLRELANLATYLIPWESRIKEIESHFGSVVASYFTFLRWLFSVNIVIS 167
Query: 202 ILVIVFLILPKTLLTERVYECDETEANSTVCCSIAYFEKNTTNSNIFLDVIQGTGWMERT 261
+L++VF+++P E +Y D +A + +++ E T + F + + G ++ +
Sbjct: 168 VLLVVFIMVP-----EEIY-VDPEKAKCDIRKTMSKQELALTRN--FSTIWEFEGHLKYS 219
Query: 262 ILFYGVYTDQIYTYYVNSLYHTKLFYNMPMAYILVPISWTLLSLIAIVKTAARGFKQKLI 321
LFYG Y+ T+ + YN+P+AY + + S +A +K A + +
Sbjct: 220 PLFYGYYS----TFSGAIAWG----YNLPLAYFFTGLVVYIYSFVATLKKMAENSRMSKL 271
Query: 322 ESEGQFYKYCNLVFGGWDFCIHNDRSARIKHQALYNEIKGCIEEERIKEEKQSRSRESQI 381
S+ Y + +F GWD+ I + +A+ + ++ K + EE EK+ +R +I
Sbjct: 272 SSKDDEYVFSWKLFTGWDYMIGHMETAQNRMASIILGFKEALLEE---AEKKKDTRNWKI 328
Query: 382 LM 383
++
Sbjct: 329 IL 330
Score = 50.0 bits (114), Expect = 2e-07
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 518 NTDTTKLECWETYVGQQFYKLILTDFAVQFVTTFLINLPRAFMARHTRS-RCL---KMFG 573
N D L CWET GQ+ KL + D V V+T +++ RA R+ S C K F
Sbjct: 474 NADIRSL-CWETMFGQELAKLTVMDLLVTIVSTLILDFLRALFVRYMNSCWCWDLEKKFP 532
Query: 574 EQ-EFYLPKHVLDIVYVQTIIWMAMF 598
+ +F + +++L +V Q ++WM MF
Sbjct: 533 KYGDFKIAENILHLVNNQGMVWMGMF 558
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 50.4 bits (115), Expect = 1e-07
Identities = 25/112 (22%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 250 DVIQGTGWMERTILFYGVYTDQIYTYYVNSLYHTKLFYNMPMAYILVPISWTLLSLIAIV 309
D++ G G++ ++++YG Y+++ +T + Y++P AY L L + + +
Sbjct: 167 DLLTGEGYLSDSVMYYGSYSNRSFTLVPGTAE-----YSLPHAYFLTITILLLATFVFVS 221
Query: 310 KTAARGFKQKLIESEGQFYKYC-NLVFGGWDFCIHNDRSARIKHQALYNEIK 360
+ ++ IES + + WD+ I N ++AR+KH + +E++
Sbjct: 222 VSMGHAYRISFIESSATVQNILTHKIVCSWDYGIANGKAARLKHATILSELR 273
Score = 42.3 bits (95), Expect = 4e-05
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 526 CWETYVGQQFYKLILTDFAVQFVTTFLINLPRA----FMARHTRSR-----CLKMFGEQE 576
CWET +GQ+ Y+L++ DF F++T L++ R AR+ +R
Sbjct: 399 CWETAIGQELYRLLVVDF---FISTVLLSAVRGVRYLLHARYGPARGRAGPLAPYLTPPP 455
Query: 577 FYLPKHVLDIVYVQTIIWMAM 597
F + H L +VY QT++W +
Sbjct: 456 FCIETHSLGLVYNQTLLWFGV 476
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 26.2 bits (55), Expect = 2.5
Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 28 ELYPGGEQELFDNLQRADAAKLATLLPSKQARNTTTVKRARSQTDRRQ----STFARTMQ 83
E Y G + + + Q+A AA + T + +RN + + Q R+Q + Q
Sbjct: 178 ETYRMGARSVIELQQQAAAAPMMTAQGAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQ 237
Query: 84 SRDIHLSMLPDLSENLSNEERSWEEIMQIKALPVPMSQKIELKARLQNATKLRLQGFEQL 143
+ + N++R W++ Q + Q+ + + + QN R Q +Q
Sbjct: 238 QQQQQQQQQQQQQQQQRNQQREWQQ-QQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQ 296
Query: 144 HLRQRK 149
+Q++
Sbjct: 297 QRQQQQ 302
>AY391746-1|AAR28996.1| 502|Anopheles gambiae putative GPCR
protein.
Length = 502
Score = 25.4 bits (53), Expect = 4.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 439 FNQLENVLMEFLPFICIVVLNLI 461
FN L+ +L+ +PF IVVLN I
Sbjct: 284 FNFLDFILVFVVPFTIIVVLNTI 306
>AY391745-1|AAR28995.1| 460|Anopheles gambiae putative GPCR
protein.
Length = 460
Score = 25.4 bits (53), Expect = 4.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 439 FNQLENVLMEFLPFICIVVLNLI 461
FN ++ V++ +PF IVVLN +
Sbjct: 203 FNYIDTVIVFVVPFTIIVVLNSV 225
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 25.4 bits (53), Expect = 4.4
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 100 SNEERSWEEIMQ--IKALPVPMSQKIELKARLQNATKLRLQGF 140
++EE+ W E+++ +K L + QK E+K++L+ L + F
Sbjct: 886 ASEEQFWIELIEKYLKPLDLSEKQKEEMKSQLKGLRDLAVFAF 928
>AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transporter
protein.
Length = 570
Score = 25.0 bits (52), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 159 TETFSKLELWQTPMREIEGKFGTGVVS 185
T+T + ELWQ MRE+ G V+
Sbjct: 134 TDT-DRTELWQVRMRELSGAIAVAAVT 159
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.324 0.137 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,415
Number of Sequences: 2123
Number of extensions: 21427
Number of successful extensions: 71
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 55
Number of HSP's gapped (non-prelim): 13
length of query: 612
length of database: 516,269
effective HSP length: 68
effective length of query: 544
effective length of database: 371,905
effective search space: 202316320
effective search space used: 202316320
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 51 (24.6 bits)
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