GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000077-TA|BGIBMGA000077-PA|undefined
         (224 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.48 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   3.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.4  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
          protein.
          Length = 361

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 45 EELGSRQKRRRVEQIYQSLSSSPDEIKATTIASLRNTGNED 85
          +E  +R+      ++  +L S   EIK  T+ SLRNT  E+
Sbjct: 56 DEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEE 96


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 207 LLLISKWGFDG 217
           L L+ KWGFDG
Sbjct: 130 LNLVQKWGFDG 140


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 43  PFEELGSRQKRRRVEQIYQSLSSSPDEIKATT 74
           PF+ L  ++KRR  E    + SSS  E    T
Sbjct: 323 PFKWLFKKKKRRNRESTTNTQSSSLSEFLTNT 354


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 154 YYKIKQEKTKCYPGKEDIIIT 174
           YYK+ ++K   + G + +I+T
Sbjct: 169 YYKLTKKKLSVFFGNKPVILT 189


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 170 DIIITEEGAAIKMQALLNLTVSRLLDVITLDLDS 203
           D+ + E GA  KMQ L  L +    ++   ++ S
Sbjct: 549 DLTVLESGAFCKMQPLRTLKIGVYRNIKNFNIPS 582


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.129    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,968
Number of Sequences: 317
Number of extensions: 1462
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 224
length of database: 114,650
effective HSP length: 55
effective length of query: 169
effective length of database: 97,215
effective search space: 16429335
effective search space used: 16429335
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 42 (21.0 bits)