Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000076-TA|BGIBMGA000076-PA|undefined
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.056
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.13
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 32 0.30
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 31 0.40
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 30 1.2
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 2.1
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 29 2.8
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 29 2.8
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 29 2.8
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 28 3.7
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 28 4.9
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 28 4.9
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 28 4.9
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 27 6.5
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 27 6.5
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 27 6.5
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 27 8.6
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 34.3 bits (75), Expect = 0.056
Identities = 53/301 (17%), Positives = 116/301 (38%), Gaps = 13/301 (4%)
Query: 51 KIPETTQILLNNASRSLETDRKKYDSNMNSPSSDRGGXXXXXXXXXXXXNRYDVEAILSP 110
K+ E+TQ L + R + ++KK++ + + +G ++ A
Sbjct: 504 KVSESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLSTLAAEKE 563
Query: 111 HRKHARHKSADVRHSERNLDNASQIRL-KNTLRINVPEENSQRIDQIRCQGNAKVRPDIT 169
++ ++ ++S + L NA Q +L K+ +++ E+N +D K+
Sbjct: 564 AAVATNNELSESKNSLQTLCNAFQEKLAKSVMQLKENEQNFSSLDT----SFKKLNESHQ 619
Query: 170 STIRRSSSFNTVNKNNNYIDTRHNYRRPSGQSEECNCSDDSDNV--SLGKCKDYKYKMLR 227
+ K+ + + R + + +E SD+++++ L K ++ +++
Sbjct: 620 ELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIK 679
Query: 228 GRLDSAELKSAVPANSPKCPNTPEMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNK 287
+ D L+ + + E R F +N V +G + E L +RN
Sbjct: 680 KQEDVDSLEKNIQTLKEDLRKSEEALR-FSKLEAKNLREVIDNLKG---KHETLEAQRND 735
Query: 288 PIGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFS 347
H S ++ T + S LTKS + + + Q + +S ++L S
Sbjct: 736 L--HSSLSDAKNTNAILSSELTKSSEDVKRLTANVETLTQDSKAMKQSFTSLVNSYQSIS 793
Query: 348 N 348
N
Sbjct: 794 N 794
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 33.1 bits (72), Expect = 0.13
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 261 VRNSVRVTTKERGSVPR---SEPLRDERNKPIGHQSRRISEPTRQAMISRLTKSRSSTRE 317
V+ SV+ T ++G++ + S+ + E K I QS + +++ S +
Sbjct: 9 VKKSVKETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSK 68
Query: 318 VQLKTQEKGQKK-PSQHRSSSALATKEVEFSNWKKRSS 354
+K Q+K +KK S S S ++ E E S+ + SS
Sbjct: 69 KSVKKQKKSKKKEESSSESESESSSSESESSSSESESS 106
Score = 30.3 bits (65), Expect = 0.92
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 8/142 (5%)
Query: 243 SPKCPNTPEMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSRRISEPTRQ 302
SPK + E +R + SV+ K + S E + S SE +
Sbjct: 50 SPK-KSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSS 108
Query: 303 AMISRLTKSRSST--REVQLKTQEKGQKKPSQHRSSSALATKEVEF---SNWKKRSSYDP 357
S ++S SS EV +KT+EK K+ S SSS+ + +E E KK SS D
Sbjct: 109 ESESSSSESSSSESEEEVIVKTEEK--KESSSESSSSSESEEEEEAVVKIEEKKESSSDS 166
Query: 358 MKAAQEGRRRQQMSKRQENKDD 379
+ + S + +++
Sbjct: 167 SSESSSSESESESSSSESEEEE 188
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.9 bits (69), Expect = 0.30
Identities = 23/125 (18%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 251 EMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRLTK 310
+ Q K + + R +E + E RD++ Q + E RQ +
Sbjct: 567 QRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKK-----QLKLAKEEERQRREAERLA 621
Query: 311 SRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQM 370
+++ + ++ K QE+ +KK + R K+ E K+ + ++ +++QQ
Sbjct: 622 EQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQE 681
Query: 371 SKRQE 375
+ R++
Sbjct: 682 ADREK 686
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 31.5 bits (68), Expect = 0.40
Identities = 36/177 (20%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 61 NNASRSLETDRKKYDSNMNSPSSDRGGXXXXXXXXXXXXNRYD--VEAILSPHRKHARHK 118
N +R+ E +RK + S ++ + + E ++P
Sbjct: 107 NQKTRNAEGERKVAQRRVQSDKAEANDAAMSSSAPTVDVSEGNSAAEPKITPDDSDTPRL 166
Query: 119 SADVRHSERNLDNASQIRLKNTLRINVPEENSQRIDQIRCQGNAKVRPDITSTIRRSS-- 176
+ D+ + + N+D A+ K+ ++NV + NS + R + KV P+I + +S
Sbjct: 167 NVDM-NDKINVDEAAA---KSDSKLNVDQINSTTESEKRVE---KVNPNIANNPLKSPDA 219
Query: 177 -SFNTVNKNNNYIDTRHNYR-RPSGQSEECNCSDDSDNVSLGKCKDYKYKMLRGRLD 231
++++ ++ T H +SE+ C D++ +SL + YK+ LRG ++
Sbjct: 220 VAYSSETVSDEKQPTEHPVSANVPAKSEKAVC-DENTKISLTNTEHYKFHSLRGDVE 275
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 469 DKKRREQDKRKTFILDDVTPTKENIDFITKTRDDVAIDKRRTFV 512
D + R RK+F DD+ T EN F T ++ I+ +FV
Sbjct: 15 DLEGRHDSIRKSFEADDIDVTDENTIFSTSRKEQSTIEPMDSFV 58
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 129 LDNASQIRLKNTLRINVPEENSQRIDQIRCQGNAKVRPDITSTIRRSSSFNTVNKNNNYI 188
L+ S + N L++N EEN Q + +R ++ ++T I+ SS+ + V N+ Y+
Sbjct: 308 LNRTSFLNSNNNLKLNEAEEN-QNLLNLRSPKSSGKADNLT--IKSSSNIDKVTSNDLYL 364
Query: 189 D 189
D
Sbjct: 365 D 365
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 246 CPNTPEMQRKFGHGLVRNSVRVTTKERG--SVPRSEPLRDERNKPIGHQSRRISEPTRQA 303
CP+TP+ Q+ F +V N+ + T SVP S P + + +P + R S + +
Sbjct: 259 CPSTPDEQKNF--FIVGNAPQQTPARPSLRSVP-SYPSSNNQRRPSASRVRSFSNYVKSS 315
Query: 304 MISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATK 342
+ + S++S + K+ ++ +Q+ +S + +K
Sbjct: 316 NVVNPSLSQASLEIIPRKSMKRDSN--AQNDGTSTMTSK 352
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 28.7 bits (61), Expect = 2.8
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 267 VTTKERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMIS-RLTKSRSSTREVQLKTQEK 325
V K + S P + L +++N + + S+ + +A RL + +S K+ ++
Sbjct: 142 VIEKLQTSTPLLQYLAEKKNAVVEKGKSKPSKKSVKAKKKLRLAEKPASNNSKAGKSSQE 201
Query: 326 GQKKPSQHRSSSALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQMSKRQENK 377
+K S+A KE + S+ +K+S P K Q S+ +K
Sbjct: 202 SKKSSKAPAESAAAVIKEDKVSD-RKKSKKKPKKTPVSNSTASQASENASDK 252
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 590 QKKPKDIQPRYMDISKYKNDTSPKNFLRRDPSKTYVGVLGETKISRGSAQHYEMEQKKQE 649
Q+KPK P + D + + N S K +PS ++ S Q+ +E
Sbjct: 88 QEKPKPDAPSFADNNSFDNVNSSK---LTNPSPVQPNIVKSESEPANSKQNEVVE--ATS 142
Query: 650 LEKWKRRASYDPRKAAALGKTSKPAPKTAR 679
+EK K +++ + G TS P K R
Sbjct: 143 VEKAKENVAHESGTPESGGSTSAPKSKKQR 172
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 307 RLTKSRSSTREVQLKTQEK-GQKKPSQHRSS--SALATKEVEFSNWKKRSSYDPMKAAQE 363
R+ + SS+ E + + ++K KK S+ ++S SAL K++E KK+ +
Sbjct: 152 RVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESS 211
Query: 364 GRRRQQMSKRQENK 377
++R+ S +E K
Sbjct: 212 SKKRKSGSSDKEEK 225
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 27.9 bits (59), Expect = 4.9
Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 560 RHAGAKRGTVPPKQRYSGDFSMTSSTTSISQKKPKDIQPRYMDISKYKNDTSPKNFLRRD 619
+H +VP QR+S + ++ + + Q R + NDTS + D
Sbjct: 87 KHQHQTSKSVPRSQRFSRELNVKKENKKVFSSQTTKRQSRKQSTALTTNDTS---IILDD 143
Query: 620 PSKTYVGVLGETKISRGSAQHYEMEQKKQELEKWKRRASYDPRKAAALGKTSKPA 674
T LG+T+ + E +K+EL + + P+ ++ L K P+
Sbjct: 144 SLHTNSKKLGKTR------NEVKEESQKRELVSNSIKEATSPKTSSILTKPRNPS 192
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 27.9 bits (59), Expect = 4.9
Identities = 48/228 (21%), Positives = 84/228 (36%), Gaps = 27/228 (11%)
Query: 144 NVPEENSQRIDQIRCQGNAKVRPDITSTIRRSSSFNTVNKNNNYIDTRHNYRRPSGQSEE 203
N E ++D + N K + ST ++ + NN ++H+ S
Sbjct: 137 NQQVERDDKLDMETTRWNGKEFEEPLSTNKKL----IIQSNNT--SSQHSTPPLSISDTS 190
Query: 204 CNCSDDSDNVSLGKCKDYKYKMLRGRLDSAELKSAVPANSPKCPNTPEMQRKFGHGLVRN 263
+ +DNV + R S K VP +SP+ N E V +
Sbjct: 191 THTGSSTDNVEANPNTGFSSARKRSLRSSNLKKKFVPLSSPEESNESEFIDDDESDEVAS 250
Query: 264 SVRVTTKE----RGSVPRSEPLR----DERNKPIGHQSRRISEPTRQAMISRLTKSRSST 315
+ + E + +P + P DE + P+ +QS+ R+ + +R + S SS+
Sbjct: 251 IIDIKEDETFDSKVEIPEAAPSSSTESDEESIPLSYQSK------RRRVSARASSSASSS 304
Query: 316 REVQLKTQEKGQKKPSQHRSSSALATKEVEFSN-WKKRSSYDPMKAAQ 362
Q K+ PS R+ L + E + W+K P + Q
Sbjct: 305 SRTQAKS------IPSHERTHYRLIRQHPELEHVWEKLEEEAPREVKQ 346
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 572 KQRYSGDFSMTSSTTSISQKKPKDIQPRYMDISKYKNDTSPKNFLRRDPSKTYVGVLGET 631
+Q +S F TS+S K ++ +PR Y N + + K Y G +
Sbjct: 274 EQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKG--KKL 331
Query: 632 KISRGSAQHYEMEQKKQELEKWK 654
+ R +H E+ ++ E+ K
Sbjct: 332 YVGRAQKKHEREEELRKRYEQMK 354
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Query: 564 AKRGTVPPKQRYSGDFSMTSSTTSISQKKPKDIQPRYM-DISKYKNDTSPKNFLRRDPSK 622
AK+ +P K + D SS T++ Q + P + +S T+P + + +
Sbjct: 434 AKKSHLPSKLSFPQDGGSLSSATTLQQLPKARVTPNVLSSLSSNLGKTNPTSVYQSKANV 493
Query: 623 TYVGVL--GETKISRGSAQHYEMEQKKQELEKWKRR 656
T + + K++ S Y+++ Q K+R
Sbjct: 494 TTSADVEKPQVKVATSSRVDYDLKSPNQRTANAKKR 529
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 276 PRSEPLRDERNKPIGHQSRRISEPTRQAMISRLTKSRS 313
P + P DE K I +++ I RQ M R+T+ RS
Sbjct: 620 PSALPPSDEEEKDINDKAKLIRNALRQRMGQRMTEIRS 657
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 322 TQEKGQKKPSQHRSSSALATKEVE-FSNWKKRSSYDPMKAAQEGRRRQQMSKRQENK 377
++EK QK+ S S+ +E + + NWKK+ + + +E + + RQ+N+
Sbjct: 31 SEEKPQKELSDASVKSSYVDQEQQAYENWKKQEQEEINRKKEEELKSKFEKLRQKNE 87
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 576 SGDFSMTSSTTSISQKKPKDIQPRYMDISKYKNDTSPKNFL 616
S D S+ +ST + QKK D R++ I + KN+ +P N L
Sbjct: 902 SADVSL-ASTLQLYQKKNYDKYRRFVLIHELKNELTPVNGL 941
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.126 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,951,527
Number of Sequences: 5004
Number of extensions: 122119
Number of successful extensions: 400
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 384
Number of HSP's gapped (non-prelim): 27
length of query: 682
length of database: 2,362,478
effective HSP length: 78
effective length of query: 604
effective length of database: 1,972,166
effective search space: 1191188264
effective search space used: 1191188264
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)
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