Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000075-TA|BGIBMGA000075-PA|undefined
         (603 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    27   0.49 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   3.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   6.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   6.0  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 207 EMHRTPSYNNLYQTRPVTHIVDES 230
           ++HR P+YNNL + + +   + ES
Sbjct: 49  DLHRKPTYNNLQEMKYLERAIKES 72


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 369 EANKGFNVPKVSKDKNVLEISCCYESPTENDLATQTSKQIKSTRSYLEKIKNRVRTITEK 428
           E  +G +  K +KD +  +I+   E   E+ +      +I      ++++ NRVR  T+K
Sbjct: 453 EELRGISRGKNAKDVDWQKIAGAVEEDDEDAIEKPAPVKIS-----VQEVLNRVRKPTKK 507

Query: 429 TFAKSPPI 436
              K+ PI
Sbjct: 508 LHLKNSPI 515


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 425 ITEKTFA--KSPPIHGEEPDF--GSFTSVTTSGVLSSKNPSKLVTSSGRRCSLTKSEIDQ 480
           +T+ TF+   SP I      F  GSFT +    VLSS    KLV  +    ++TK + D 
Sbjct: 55  LTQMTFSGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKTLE--NMTKIDKDL 112

Query: 481 TD 482
           T+
Sbjct: 113 TE 114


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 425 ITEKTFA--KSPPIHGEEPDF--GSFTSVTTSGVLSSKNPSKLVTSSGRRCSLTKSEIDQ 480
           +T+ TF+   SP I      F  GSFT +    VLSS    KLV  +    ++TK + D 
Sbjct: 55  LTQMTFSGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKTLE--NMTKIDKDL 112

Query: 481 TD 482
           T+
Sbjct: 113 TE 114


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.125    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,830
Number of Sequences: 317
Number of extensions: 5650
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 4
length of query: 603
length of database: 114,650
effective HSP length: 61
effective length of query: 542
effective length of database: 95,313
effective search space: 51659646
effective search space used: 51659646
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 46 (22.6 bits)