Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000075-TA|BGIBMGA000075-PA|undefined
(603 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 39 0.002
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 34 0.065
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 33 0.11
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 33 0.11
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 32 0.26
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.35
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 0.46
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 31 0.46
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 31 0.61
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 31 0.61
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 30 0.80
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 30 1.1
SPAC1B1.03c |kap95||karyopherin Kap95|Schizosaccharomyces pombe|... 30 1.1
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 30 1.1
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 30 1.1
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 30 1.1
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 30 1.1
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 30 1.1
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 1.4
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 29 2.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 2.5
SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein L5|Sch... 29 2.5
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 29 2.5
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 28 3.2
SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces ... 28 3.2
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 28 4.3
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 4.3
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 27 5.7
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 27 5.7
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 7.5
SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein L5|Schizo... 27 7.5
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 27 7.5
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 9.9
SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|... 27 9.9
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 9.9
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 27 9.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 9.9
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 27 9.9
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 39.1 bits (87), Expect = 0.002
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 79 KKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSIK 138
K+S +Q+ +S + SP Q P + P KTQ ++S +D +DS L
Sbjct: 282 KRSLGHNQKSDRVSKDV---SPQHQANPSTLNNPLKTQNFDSSKNLYTDNKDSSLVSPTG 338
Query: 139 IRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHA---SKSPIVDSIMSRSDNYSYLSRQAL 195
+++ + QNP P+ + + + +H A S P +S + +
Sbjct: 339 LQSRMEQNPEVRAHPMKDSATSTALRRSHALGAAADSLLPQENSAQIYDGKDVSMVNDNM 398
Query: 196 NLPLKSNTYSKE--MHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPELDILTPDNGV 253
+ ++ ++++KE R PS + TR ++ P VL T ++ L P V
Sbjct: 399 HSDVRQDSFNKESIKQRIPSLSPPI-TR--SYNAKHRPSLVLGTSVNPHSLSPSQPPVVV 455
Query: 254 PTPEHYKS--PSTRKGRATSETPDL 276
P+ S P T + ++ P+L
Sbjct: 456 PSNTTISSSPPLTSPVKTSANIPNL 480
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 33.9 bits (74), Expect = 0.065
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 129 EDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSI---MSRSD 185
E LS + K RN Q + SP+ + P N H+KH SK PI I + RS
Sbjct: 37 EPGNLSNNDKERNLEDQFNSMKLSPVASSKENYPDNHMHSKHISKLPIASPIPRGLDRSG 96
Query: 186 NYSY 189
SY
Sbjct: 97 ELSY 100
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 33.1 bits (72), Expect = 0.11
Identities = 48/208 (23%), Positives = 74/208 (35%), Gaps = 16/208 (7%)
Query: 81 SQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSIKIR 140
S ++ M + P PP+S +G N+ FSS Q+ G+SG K +
Sbjct: 15 SSSKWSMAPGMMMQQNQPRPATTTPPISRGNEDADEGLNTARSFSSFQDLKGMSGDAKEQ 74
Query: 141 NS-----LAQNPAHTNSPITNRHI-------KSPVNDAHTKHA-SKSPIVDSIMSRSDNY 187
S L + AH S R I + N TK A +KS + +I D
Sbjct: 75 ESATLVHLTKGRAHPRSRRPPRQISIDSAKKEETKNTGSTKAADTKSSVEATISPLKDTK 134
Query: 188 SYLSRQALNL-PLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPELDI 246
S + + P +S T + + T + + T V+ + +
Sbjct: 135 SPSNASVFPIKPTESKTSTTKDSETAKEED-DASSSTTKAVEATTSKASSAHTDTLATSA 193
Query: 247 LTPDNGVPTPEHYKSPSTRKGRATSETP 274
D G TPE R+G +TS P
Sbjct: 194 SNSDRGASTPEMVVKAEKREG-STSPIP 220
Score = 27.1 bits (57), Expect = 7.5
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 10/150 (6%)
Query: 65 ESKPVDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYF 124
ESK V R + R+ + SL+++SP P LP T S
Sbjct: 384 ESKVVTRRTGSGNNYRVGLRNVSGSERTKSLSKESPVEPEKPA---LPDAT----SSSTP 436
Query: 125 SSDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRS 184
+++ ++S + IK + N + SP I + + H+S S ++S+ S +
Sbjct: 437 TTENKESWTNQGIKSSQQRSANASPATSPSNQASIHASFTKESSTHSSPSFTLESLFSGA 496
Query: 185 DNYSYLSRQALNLPLKSNTYS---KEMHRT 211
L+R + P S KE +RT
Sbjct: 497 PRVVELTRFSQPSPACSRALLARWKEEYRT 526
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 33.1 bits (72), Expect = 0.11
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 72 RRLEQLAKKSQARHQRVQSMS-ASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQ-E 129
R L Q ++ Q R Q +++ A+ TRQ T++RPP+SA+ ++ + + S + E
Sbjct: 54 RELRQKYEEEQRRQQAMEAKRIAASTRQ--TSERPPLSAEEAKRIREVKEKDRLESKKNE 111
Query: 130 DSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDS 179
G S A + N ++ ++S + + H+ K P+ +S
Sbjct: 112 RQGKPRSYNELLRQASSAPAVNETSSSGLLQSKDKRSQSPHSPKKPVKNS 161
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 31.9 bits (69), Expect = 0.26
Identities = 51/205 (24%), Positives = 77/205 (37%), Gaps = 26/205 (12%)
Query: 66 SKPVDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAK----LPRKTQGYNSE 121
S V N ++ K +R + ++S + SP++Q PP+S K K +SE
Sbjct: 244 SSTVRNNTTQKSVLKKPSRKMS-PAYTSSYRQNSPSSQVPPVSKKHVIIYENKEGSSSSE 302
Query: 122 GYFSSDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIM 181
+ ED SGS + SL +P + R P N S I ++
Sbjct: 303 SVYEDVFEDFDPSGSNQA--SLRSTSTIHYTPSSKRISVIPPN--------TSNIGSRVV 352
Query: 182 SRSDNYSYLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESP-EAVLLTDIS 240
SRS Q N P + Y+++ SY + T+ H P + V T
Sbjct: 353 SRSG-------QNNNQPAQPGQYNQQSQPVQSYQSGQSTQ---HFQPVQPIQPVQSTQYY 402
Query: 241 SPELDILTPDNGVPTPEHYKSPSTR 265
P + NGVP P ST+
Sbjct: 403 QPSSPVQPVQNGVPAPPMQPVQSTQ 427
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.5 bits (68), Expect = 0.35
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 141 NSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALNLPLK 200
N+ N A TN P T+ + P AS SP + + S+ S +RQ +
Sbjct: 241 NTSPANGAPTNKPSTDINTTDPATQTTQVSASNSPALSGSSTPSNTSSRSNRQNHGNFSE 300
Query: 201 SNTYSKEMHRTPSYN 215
Y + + PSYN
Sbjct: 301 KRHYDRYGNSHPSYN 315
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 76 QLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSG 135
Q+ K + A + V S S P + P + R + + Q SG+S
Sbjct: 135 QIGKDNAAPVENVNEKSTSQETAPPVSTVPIQFGSITRNAAIPSKPKVSGNMQNKSGVSS 194
Query: 136 ----SIKIRNSLAQNPAHTNSPI 154
S + +S+ NP HT P+
Sbjct: 195 YSSKSQSVNSSVTSNPPHTEEPV 217
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 31.1 bits (67), Expect = 0.46
Identities = 49/238 (20%), Positives = 86/238 (36%), Gaps = 9/238 (3%)
Query: 2 SVSVEADVPSPVSDGQSTTLDPTXXXXXXXXXXXXDEIEVGQDEKSESSTPKIHPMAFTI 61
S S + D S SD +S + + G D S SS+ + +
Sbjct: 121 SSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDN 180
Query: 62 DFGESKPVDNRRLEQLAKKSQARHQRVQSMSAS----LTRQSPTAQRPPMSAKLPRKTQG 117
D S S + +S S+S + S +++ S +
Sbjct: 181 DSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSS 240
Query: 118 YNSEGYFSSDQED-SGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPI 176
+SE SS+ D S S + +S + + +NS + S +D+ ++ +S+
Sbjct: 241 SDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDS- 299
Query: 177 VDSIMSRSDNYSYLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAV 234
DS S SD+ S S + N + T S E+ S N+ + T + DE +
Sbjct: 300 -DSTSSSSDSDSSSSSEDGNSNTDTTT-SGEVSAQSSTNST-SSEESTSVKDEDSSKI 354
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 31.1 bits (67), Expect = 0.46
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 156 NRHIKSP-VNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALNLPLKSNTYSKEMHRTPSY 214
N H+ P V + + H P+VD ++ S+Q LPL+ + SK +R P+
Sbjct: 141 NSHVNYPDVRNVYDCHTGLQPLVDHDCIEDRQKTFASKQLPTLPLQKS--SKLSNRRPAL 198
Query: 215 NNLYQTRPVTHIVDESPEAVLLTDISSPEL 244
++ + + +P + L +++SS L
Sbjct: 199 HSFHSAPANSLYPLPTPTSQLPSNLSSNNL 228
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/79 (24%), Positives = 30/79 (37%)
Query: 81 SQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSIKIR 140
+Q+ H RV S +++ + SP P S P + FS+ G+ I
Sbjct: 352 AQSPHPRVFSANSAFSTTSPPPLTPSTSRDYPFSASTISPSTPFSAYSSSHGIHQRIPAS 411
Query: 141 NSLAQNPAHTNSPITNRHI 159
NPA N P ++
Sbjct: 412 TPTNTNPADQNPPCNTIYV 430
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 69 VDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTA---QRPPMSAKLPRKTQGYNSEGYFS 125
+D ++LE++ KK + H++ S+S R+S ++ ++ KL K + +S
Sbjct: 187 LDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKIKLKDKPESTSSVEKVK 246
Query: 126 SDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHI 159
+ + + R LAQ A + P+ R I
Sbjct: 247 EGNRPASIHFHTR-RKFLAQKRAAVSDPVALREI 279
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 30.3 bits (65), Expect = 0.80
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 71 NRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQED 130
N L+ K +A S +A+ T +PT + PR T N+ +S+
Sbjct: 124 NLVLKVAPSKIRAPAGNHSSTTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTR 183
Query: 131 SGLSGSIK--IRNSLAQNPAHTNSPITNR 157
+G S + +H +SP+TNR
Sbjct: 184 NGTSAATSNGTGTGAGTGASHRSSPVTNR 212
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 138 KIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPI 176
+IR LA N + TN+P+ N H ++P ++ T P+
Sbjct: 228 RIRFILAPNRSATNTPVENTHPENPDSNTSTPTTRSEPL 266
>SPAC1B1.03c |kap95||karyopherin Kap95|Schizosaccharomyces pombe|chr
1|||Manual
Length = 863
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 148 AHTNSPITNRHI---KSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALNLPLKSNTY 204
A T SP N + K N A T A ++ ++ ++ Y+ R A L LK+
Sbjct: 8 AQTLSPDANVRLNAEKQLENAARTDFAQYMVLLAQELANDNSMPYI-RMAAGLALKNAIT 66
Query: 205 SKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPE 243
++E R Y L+Q+ PV + + +++ L + S E
Sbjct: 67 AREEARKLEYQQLWQSLPVE--IKQQVKSLALQTLGSSE 103
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 88 VQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSIKIRNSLAQNP 147
++ S+S P + P +S + Q N + + ++ G S S R+S+ ++
Sbjct: 182 LEPSSSSSFSVPPESLNPTLSFQHNDVPQTDNFIPFLTPKRQAYGQSSSRADRSSVRRSQ 241
Query: 148 AHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNY 187
+ N R+ K ++ HT HAS + D I S S Y
Sbjct: 242 SFKN----RRNGKPRISRLHTSHASIDGLTDFIQSPSSGY 277
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 400 LATQTSKQIKSTRSYLEKIKNRVRTITEK---TFAKSPPIHGEEPDFGSFTSVTTSGVLS 456
++ +Q+ S S EK++ + K FA+ P G P G SV++ G
Sbjct: 1 MSDNVQQQVDSVGSVTEKLQKTNISRPRKYIPPFARDKPSAGAAPAVGDDESVSSRGSSR 60
Query: 457 SKNPSKLVTSSGRR 470
S+ PS+ ++ G R
Sbjct: 61 SQTPSEFSSNYGGR 74
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 119 NSEGYFSSDQEDSGLSGSIKIRNSLAQNPAH--TNSPITNRHIKSPVNDAHTKHASKSPI 176
NS+ + + D SGLS + SL P + P+ N+ S +DA SKS I
Sbjct: 667 NSQHHHNRDDASSGLSSNGSENESLEHEPTNELPQRPLVNQSQNSHGDDAPNWSRSKSAI 726
Query: 177 VDSIMSRSDNYSYLS 191
+ ++S + YS ++
Sbjct: 727 I--LLSATFLYSLIA 739
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 29.9 bits (64), Expect = 1.1
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 49 SSTPKIHPMAFTIDFGESKPVDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMS 108
SS PK P FG +KPVDN + Q ++ A+ + + R+ T+++P S
Sbjct: 267 SSKPKRDP------FGGAKPVDNTSVLQRVEEKLAKRTQSFRREDNANRERSTSRKP--S 318
Query: 109 AKLPRKTQGYNSEGYFSSD-QEDSGLSGSIKIRNSLA--QNPAHTNSPITN 156
A KT ++ SD + G S + + +A + PA ++P TN
Sbjct: 319 ADKAEKTDKTDAIAEKVSDIRLGDGEKKSSETDSEVAATKTPATEDAPATN 369
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 29.9 bits (64), Expect = 1.1
Identities = 36/188 (19%), Positives = 69/188 (36%), Gaps = 4/188 (2%)
Query: 235 LLTDISSPELDILTPDNGVPTPEHYKSPSTRKGRATSETPDLFKKCMIKETLYIDDEVDR 294
L D+S +L N T E+ +PS K +A S+ K + L D D
Sbjct: 443 LKDDLSLADLSSKKTANSQAT-ENNNTPSKAKVKAESKVRSKAKSDKSRAKLSSDTNKDS 501
Query: 295 ESNNSSTGTYTIEGDNYTEEQKARMSIDRNFDTKLIKDEEIFKQRSRDPELILDFTQRVI 354
E N+++ + G E + + +K K ++ S++ T+
Sbjct: 502 EKNDNNDASLQSAGVASDGESSPETPLTKASKSKKAKASKLANDTSKNAN---GETKSTP 558
Query: 355 TKEPRRDTYLRSPVEANKGFNVPKVSKDKNVLEISCCYESPTENDLATQTSKQIKSTRSY 414
K ++ + + + K+S D S E+ TE+ A T+ +
Sbjct: 559 KKSKKKTSKAQQEANSTTAEGKEKLSGDSTETGNSTNKEASTEDTKANATASAPNKKKKT 618
Query: 415 LEKIKNRV 422
+E ++ +V
Sbjct: 619 VETLQQQV 626
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 396 TENDLATQTSKQIKSTRSYLEKIKNRVRTITEKTFAKSPPIHGEEPDFGSFTSVTTSGVL 455
TEN+ A +K++ + SY+EK+ + + F+ +P + F +V G
Sbjct: 3407 TENNSAMWVAKKVNLSPSYIEKMDTEIMKLVPVRFSNTPTT--LRLMWTLFANVEKPGST 3464
Query: 456 SSKNPSKLVTSSGRRCSLTKSEID 479
+ S L+T + LT I+
Sbjct: 3465 FTNMVSNLITDARELMKLTPETIN 3488
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/121 (18%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 99 SPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRH 158
S T+Q + +P ++ + S S + S S + +S++ + + +N+ T
Sbjct: 129 STTSQASAKHSAVPHRSSQFQSTTLTPSTTDSS--STDVSSSDSVSTSASSSNASNTVS- 185
Query: 159 IKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALNLPLKSNTYSKEMHRTPSYNNLY 218
+ SP + + T ++ ++S++D ++ N P++ + Y + + S Y
Sbjct: 186 VTSPASSSATPLPNQPSQQQFLVSKNDAFTTFVHSVHNTPMQQSMYVPQQQTSHSSGASY 245
Query: 219 Q 219
Q
Sbjct: 246 Q 246
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 2.5
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 7/135 (5%)
Query: 2 SVSVEADVPSPVSDGQSTTLDPTXXXXXXXXXXXXDEIEVGQDEKSESSTPKIHPMAFTI 61
S S ++ S S+ +S++ + +E+ V +EK ESS+ + +
Sbjct: 89 SESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSES----SSSS 144
Query: 62 DFGESKPVDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSE 121
+ E + + E+ S + + S S S + S + + + K K +G +SE
Sbjct: 145 ESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEG-SSE 203
Query: 122 GYFSSDQEDSGLSGS 136
SSD E S S S
Sbjct: 204 S--SSDSESSSDSSS 216
>SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 28.7 bits (61), Expect = 2.5
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 284 ETLYIDDEVDRESNNSSTGTYTIEGDNYTE---EQKARMSIDRNFDTKLIKDEEIFKQRS 340
E L DDE + S IE D + E A++ D +F K KD FK S
Sbjct: 209 EMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQ-KSGKDAAAFKAES 267
Query: 341 RDPELILDFTQRVITKEPRRDTYLRSPVEANK 372
L +TQR +T E R++ + +EA +
Sbjct: 268 ------LKYTQRKLTAEERKERFNAKVIEAGR 293
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/115 (19%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 17 QSTTLDPTXXXXXXXXXXXXDEIEVGQDEKSESSTPKIHPMAFTIDFGESKPVDNRRLEQ 76
+ T LDP+ + + + ++ + ++ + I+ G+ + VD +R +
Sbjct: 1197 EGTELDPSLQSLDTDYPIDTNALSLDHEQGFSDDSDSVYEPSSPIEEGDEE-VDGQRKDI 1255
Query: 77 LAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDS 131
L + Q + + R+S + RP S + R + Y+ + +S+ Q+DS
Sbjct: 1256 L---NFMNSQSLTQTGSVPKRKSTSYTRPSKSYRHKRGSTSYSRKRKYSTSQKDS 1307
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 28.3 bits (60), Expect = 3.2
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 397 ENDLATQTSKQIKSTRSYLEKIKNRVRTITEKTFAKSPPIHGEEPDFGSFTSVTTSGVLS 456
EN T S S+RS E+I + +T+ + + P H E D FTS +S
Sbjct: 428 ENSHLTLLSPIRPSSRSMEEQIMD----LTQPISSTNAPTHLNEDDLNQFTSNISSSSKP 483
Query: 457 SKNPSKLVTSS 467
K+ +K SS
Sbjct: 484 RKDNNKTANSS 494
>SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 539
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 188 SYLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRPVTH 225
S S +LN PL SN +S H SY + +P+ H
Sbjct: 276 SMASAASLNTPLSSNDHSLNPHAHGSYPMYEKFQPIQH 313
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.9 bits (59), Expect = 4.3
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 125 SSDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRS 184
S +EDSG + + +S + P H +R SP +D ++ S VDS SRS
Sbjct: 91 SFQREDSGYNDDVVTNSSSHRTPRH------HRRSYSPRSDYGSRSPSPHSSVDSHQSRS 144
Query: 185 DNYSYLSRQALNLPLKSNTYSKEMHRTPSYN 215
S ++ + S+ HR Y+
Sbjct: 145 PVRSRDRDRSSRSSRSRHPSSRSRHRYDDYS 175
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 4.3
Identities = 49/251 (19%), Positives = 107/251 (42%), Gaps = 22/251 (8%)
Query: 185 DNYSYLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPEL 244
D++S +Q NL +S + K+++ L +T V ++ E E L +S E
Sbjct: 894 DSFSETKQQNENLQRESASL-KQINNELESELLEKTSKVETLLSEQNE--LKEKLSLEEK 950
Query: 245 DILTPDNGVPT-PEHYKSPSTRKGRATSETPDLFKKCMIKE------TLYIDD---EV-D 293
D+L + + E+ + + K + L + + K+ T YI D E+ +
Sbjct: 951 DLLDTKGELESLRENNATVLSEKAEFNEQCKSLQETIVTKDAELDKLTKYISDYKTEIQE 1010
Query: 294 RESNNSSTGTYTIEGDNYTEEQKARMSIDRNFDTKLIKDEEIFKQRSRDPELILDFTQRV 353
N +I+ + E R+ ++ LI D I KQ+ + ++ +
Sbjct: 1011 MRLTNQKMNEKSIQQEGSLSESLKRVKKLERENSTLISDVSILKQQKEELSVLKGVQELT 1070
Query: 354 ITKEPRRDTYLRSPVEANKGFNVPKVSKD-KNVLEISCCYE-SPTEN-DLATQTSKQIKS 410
I + YL + V+ +PK+ K+ +++ + Y+ T+N +L + + + +
Sbjct: 1071 INNLEEKVNYLEADVK-----QLPKLKKELESLNDKDQLYQLQATKNKELEAKVKECLNN 1125
Query: 411 TRSYLEKIKNR 421
+S ++++N+
Sbjct: 1126 IKSLTKELENK 1136
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 82 QARHQRVQSMSASLTRQSPTAQRPP----MSAKLPRKT 115
Q R ++Q + +QSP AQ+PP SA + RKT
Sbjct: 304 QQRQMQMQQQQKAQQQQSPKAQQPPAHLVQSAPVQRKT 341
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 381 KDKNVLEISCCYESPTENDLATQTSKQIKSTRSYLEKIKNRVRTITEKTFAK----SPPI 436
+ +LE + ES +++ ++ + K++ + LEK N + + EK+ ++ P +
Sbjct: 24 RQTELLEEALDSESDEDDEFSSTSGKKVVNVFEILEKENNAINSEAEKSVSEEEQDEPLV 83
Query: 437 HGEEP 441
GE P
Sbjct: 84 EGESP 88
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 7.5
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 113 RKTQGYNSEGYFSSDQEDSGLSGSIKIRNSLAQNPAH---TNSPITNRHIKSPVNDAHTK 169
RK G +S S+ + GL+ + + S A +P H +P + R K P+N+
Sbjct: 850 RKPNGLHSPSSLLSNSNNFGLNPNARHSLSRANSPVHHYPFATPPSQRANKYPLNNGANV 909
Query: 170 HA--------SKSPIVDSIMSRSDNYSYLSRQALNLPL-KSNTYSKEMHRTPSYN 215
A SP+V+ +++ + S LS +L PL K +++ H +++
Sbjct: 910 PALLNSFSSPQLSPLVNRVLNEPSS-SPLSSSSLKSPLSKEGVLNQQGHEQYNFS 963
>SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 27.1 bits (57), Expect = 7.5
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 284 ETLYIDDEVDRESNNSSTGTYTIEGDNYTE---EQKARMSIDRNFDTKLIKDEEIFKQRS 340
E L DDE + S IE D + E A++ D +F K KD FK S
Sbjct: 209 EMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQ-KSGKDAAAFKAES 267
Query: 341 RDPELILDFTQRVITKEPRRDTYLRSPVEANK 372
L TQR +T E R++ + +EA +
Sbjct: 268 ------LKHTQRKLTAEERKERFNAKVIEAGR 293
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 27.1 bits (57), Expect = 7.5
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 78 AKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSI 137
A QAR +R S++ L SP+ +PP SA P Y+S ++ +
Sbjct: 300 ASPRQARPRRSVSLATGLN--SPSVSKPPSSATGPL----YHSPQSSLTNSSVASADVQE 353
Query: 138 KIRNSLAQNPAHTN-SPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALN 196
+ N+ +P S T++H NDA AS I+ + ++ + S A++
Sbjct: 354 RTHNTNGASPIQDQISEFTDQHQNPSNNDA----ASTQSILKTAPTQLSASAKTS--AIS 407
Query: 197 LPLKSNTYSKEMHRTPSYNNLYQT 220
LP KE +R+ S N+ Y +
Sbjct: 408 LP---EVAKKERNRSNSTNDDYSS 428
>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 26.6 bits (56), Expect = 9.9
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 14/148 (9%)
Query: 69 VDNRRLEQLAKKSQARHQRVQSMSASL-TRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSD 127
+D RRL + + A H R+ SAS TR + P + K R+ +
Sbjct: 108 LDGRRLSKRNAANHASHHRMPDESASYRTRGEYESSSPRVPQKSLRRYYSTRTAQRLDVR 167
Query: 128 QEDSGLSGSIKIRNSLAQNPAH--------TNSPITNRHIKSPVNDAHTKHASKSPIVDS 179
+ S S K + +P ++ TNR + S + S SP D
Sbjct: 168 RPASRSSRYSKTSDLPPSDPGRFVDDSDLTPHTDFTNRFVDSDFDPDSGVGRSSSP--DQ 225
Query: 180 IMSRSDNYSYLSRQALNLPLKSNTYSKE 207
+MSR++N + +R S Y+KE
Sbjct: 226 MMSRNNNLNINARMT---STSSKPYAKE 250
>SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 385
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 392 YESPTENDLATQTSKQIKST-RSYLEKIKNRVRTITEKTFAK-SPPIHGEEPDFGSFTSV 449
+E+ N L QIK RS + + + E TF +PP + E DF +F
Sbjct: 112 FETAKSNILQNNMESQIKIVLRSKQDCLLPDTEGMEEFTFVMCNPPFYEHEEDFINFKQN 171
Query: 450 TTSGVLSSKNPSKLVTSSG 468
SGV + ++VT G
Sbjct: 172 PPSGVCTGVY-HEMVTEGG 189
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 80 KSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSIK 138
KS+ R Q V S A + P + ++ RKT + FSSD ED L S+K
Sbjct: 1320 KSRKRSQSVDSEDAG--SKKPVKKIAASASGRGRKTNKPVATTIFSSDDEDDLLPSSLK 1376
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 144 AQNPAHTNSPITNRHIKSPV-NDAHTKHASKSPIVDS 179
++N A PI RH SPV + K+ KSP+ S
Sbjct: 19 SENEAKEEKPIGRRHTMSPVPATSENKYFGKSPLSGS 55
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 9.9
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 267 GRATSET-PDLFKKCMIKETLY-IDDEVDRESNNSSTGTYTIEGD-NYTEEQKARMSIDR 323
G+A +T D CM+++ L D + S+ +S + +G Y + SI
Sbjct: 575 GQALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSI-- 632
Query: 324 NFDTKLIKDEEIFKQRSRDPELILDFTQRVITKEPRR 360
N+ L E+IF S + L+LD ++V +P+R
Sbjct: 633 NYLQSLQTLEQIFAVSSPEVALLLDLLKKVFVYDPKR 669
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 364 LRSPVEANKGFNVPKVSKDKNVLEISCCYESPTENDLATQTSKQIKST----RSYLEKIK 419
L S + K + P S + L++S +++ +ND +ST RS +E +
Sbjct: 138 LGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSRSTPSPLRSAMENVL 197
Query: 420 NRVRTITEKTFAKS 433
+ + +K+F+++
Sbjct: 198 QSLNAMGKKSFSRA 211
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.125 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,764,078
Number of Sequences: 5004
Number of extensions: 121515
Number of successful extensions: 344
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 320
Number of HSP's gapped (non-prelim): 47
length of query: 603
length of database: 2,362,478
effective HSP length: 77
effective length of query: 526
effective length of database: 1,977,170
effective search space: 1039991420
effective search space used: 1039991420
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 56 (26.6 bits)
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