Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000075-TA|BGIBMGA000075-PA|undefined
(603 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-05
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.12
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.29
SB_49823| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.66
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30) 33 0.66
SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29) 33 0.66
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 33 0.87
SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71) 31 2.7
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 31 3.5
SB_10171| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_23257| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_19871| Best HMM Match : dDENN (HMM E-Value=0.15) 31 3.5
SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16) 31 3.5
SB_6398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_59641| Best HMM Match : PAE (HMM E-Value=0) 30 4.7
SB_50896| Best HMM Match : TB (HMM E-Value=2.9) 30 4.7
SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.7
SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83) 30 4.7
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.2
SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15) 30 6.2
SB_24482| Best HMM Match : KID (HMM E-Value=0.045) 30 6.2
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 30 6.2
SB_8607| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.2
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.1
SB_22463| Best HMM Match : VWA (HMM E-Value=0) 29 8.1
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 8.1
SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89) 29 8.1
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 29 8.1
SB_9603| Best HMM Match : Extensin_2 (HMM E-Value=0.0058) 29 8.1
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.1
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 29 8.1
>SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 48.8 bits (111), Expect = 1e-05
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Query: 146 NPAHTNSPITNRHIKSPVNDAHTKHA-SKSPIVDSIMSRSDNYSYLSRQALNLPLKSNTY 204
N T P+ NR + PVN+ T+ A + + DSI +R + + + T
Sbjct: 290 NNRDTRDPVNNRDSRDPVNNRDTQDAVNNTDTRDSINNRDTRDTDNNNDTRXXXXTTETP 349
Query: 205 SKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPELDILTPD--NGVPTPEHYKSP 262
+ T T P T E+PE T +L TP+ + TPE +
Sbjct: 350 ETQSTTTTPETQSTTTTPETQSTTETPETQSPTQTPETQLTTETPETQSTTTTPETQSTT 409
Query: 263 STRKGRATSETPDLFKKCMIKETLYI 288
T + ++T+ETPD + +T +
Sbjct: 410 GTPETQSTTETPDTQSTTLFNDTFRV 435
Score = 36.3 bits (80), Expect = 0.071
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 3/165 (1%)
Query: 146 NPAHTNSPITNRHIKSPVNDAHTKH-ASKSPIVDSIMSRSDNYSYLSRQALNLPLKSNTY 204
N T P+ NR + PVN+ T+ + D + +R + + + +T
Sbjct: 272 NNTDTRDPVNNRDTRDPVNNRDTRDPVNNRDSRDPVNNRDTQDAVNNTDTRDSINNRDTR 331
Query: 205 SKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPELDILTPDNGVPT--PEHYKSP 262
+ + P T +PE T + TP+ PT PE +
Sbjct: 332 DTDNNNDTRXXXXTTETPETQSTTTTPETQSTTTTPETQSTTETPETQSPTQTPETQLTT 391
Query: 263 STRKGRATSETPDLFKKCMIKETLYIDDEVDRESNNSSTGTYTIE 307
T + ++T+ TP+ ET + D +S T+ ++
Sbjct: 392 ETPETQSTTTTPETQSTTGTPETQSTTETPDTQSTTLFNDTFRVQ 436
Score = 33.5 bits (73), Expect = 0.50
Identities = 29/168 (17%), Positives = 64/168 (38%), Gaps = 6/168 (3%)
Query: 146 NPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALNLPLKSNTYS 205
N T + NR + PVN+ T+ + ++ D ++ + P+ +
Sbjct: 254 NNRDTRDTVNNRDTRDPVNNTDTRDPVNNRDTRDPVNNRDTRDPVNNRDSRDPVNNRDTQ 313
Query: 206 KEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPELDILTPDNGVPTPEHYKSPSTR 265
++ T + +++ R + + +PE T TPE + +T
Sbjct: 314 DAVNNTDTRDSI-NNRDTRDTDNNNDTRXXXXTTETPETQSTTT-----TPETQSTTTTP 367
Query: 266 KGRATSETPDLFKKCMIKETLYIDDEVDRESNNSSTGTYTIEGDNYTE 313
+ ++T+ETP+ ET + + +S ++ T + G T+
Sbjct: 368 ETQSTTETPETQSPTQTPETQLTTETPETQSTTTTPETQSTTGTPETQ 415
Score = 31.5 bits (68), Expect = 2.0
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 15/168 (8%)
Query: 139 IRNSLAQNPAHTNS---PITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQAL 195
+ N+ ++P + N P+ NR + PVN+++T+ + ++ D ++ +
Sbjct: 127 VNNTDTRDPVNNNDTRDPVNNRDTRDPVNNSYTRDPVNNSDTRDPVNNRDTRDPVNNRDT 186
Query: 196 NLPLKSNTYSKEMHRTPSYNNLYQTR-PVTHIVDESPEAVLLTDISSP--ELDILTPDNG 252
P+K Y+ R P NN TR PVT+ ++ +++ TD P D DN
Sbjct: 187 RYPVK---YTDT--RYPVNNN--DTRDPVTN--TDTRDSINNTDTRDPVNNRDTQDTDNN 237
Query: 253 VPTPEHYKSPSTRKGRATSETPDLFKKCMIKETLYIDDEVDRESNNSS 300
T + + TR +T D ++ + D D +N +
Sbjct: 238 RDTRDPVNNRDTRDPVNNRDTRDTVNNRDTRDPVNNTDTRDPVNNRDT 285
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 35.5 bits (78), Expect = 0.12
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 97 RQSPTAQRPPMSAKLPRKTQGY-NSE-GYFSSDQEDSGLSGSIKIRN-SLAQNPAHTNSP 153
R+S +A P + KLP++ + + N+E SS +S L IK+ N + NP H+
Sbjct: 622 RESMSASLPSIKLKLPKRQESFENTEKKRLSSSAAESAL--KIKVSNGKIVSNPNHSGQM 679
Query: 154 ITNRHIKSPVNDAHTKHASKSPIVD 178
NR +S D ++ S SP D
Sbjct: 680 GVNREFQSLTGDDRAQY-SCSPSAD 703
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 34.3 bits (75), Expect = 0.29
Identities = 76/389 (19%), Positives = 153/389 (39%), Gaps = 27/389 (6%)
Query: 76 QLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSG 135
Q ++ SQ +S S+ +T S T + P S+++ TQ S S+ QE S
Sbjct: 1065 QESRSSQVTSATQESPSSQVT--SVTQESP--SSQVTSATQESRSSQVTSATQE----SR 1116
Query: 136 SIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQAL 195
S ++ ++ + P+ + +T+ S V A + S + RS + ++++
Sbjct: 1117 SSQVTSATQEPPSTQVTSVTHEPPSSQVTSATQEPPSSQVTSVTQEPRSSQVTSATQESR 1176
Query: 196 NLPLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLT---DISSPELDILT--PD 250
+ + S T + S ++ VT + ES + + + + S ++ T P
Sbjct: 1177 SSQVTSVTQESSSTQVTSATQESRSSQVTSVTQESRSSQVTSVTQESRSSQVTSATQEPP 1236
Query: 251 NGVPTPEHYKSPSTRKGRATSETPDLFKKCMIKETLYID-DEVDRESNNSSTGTYTIEGD 309
+ T +SPST+ AT E+P +E+ Y V +E ++ + T E
Sbjct: 1237 STQATSVTQESPSTQVTSATQESPSSQVTSATQESRYSQVTSVTQEPPSTQVTSATQESR 1296
Query: 310 NYTEEQKARMSIDRNFDTKLIKDEEIFKQRSRDPELILDFTQRVITKEPRRDTYLRSPVE 369
+ + S R+ E Q + + +T+EP + + S +
Sbjct: 1297 SSQVTSVTQES--RSSQVTSATQESPSSQVTSATQESRYSQVTSVTQEPP-SSQVTSVTQ 1353
Query: 370 ANKGFNVPKVSKDKNVLEISCCYESPTENDLATQTSKQIKSTRSYLEKIKNRVRTITEKT 429
++ V V+++ +++ TQ S+ + T + E +V ++T+++
Sbjct: 1354 ESRSSQVTSVTQESRSSQVTS----------VTQESRSSQVTSATQEPPSTQVTSVTQES 1403
Query: 430 FAKSPPIHGEEPDFGSFTSVTTSGVLSSK 458
+ +EP TSVT S K
Sbjct: 1404 PSSQVTSATQEPPSTQVTSVTQESRYSQK 1432
>SB_49823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 33.1 bits (72), Expect = 0.66
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 13/203 (6%)
Query: 64 GESKPVDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGY 123
G PV+ + + + Q R R S++ S ++ AQR M A +G +
Sbjct: 137 GRKPPVNRAKERRSSTAHQKRRSRRSSIAMSKQKRMTRAQRARMEALQSFGGKGLDQIAK 196
Query: 124 FSSDQEDSGLSGSIKIRNSLAQNPAH-TNSPITNRHIKSPVNDAHTKHASKSPIVDS--I 180
E+S G+ + + + NS + + + + +S SPI +S I
Sbjct: 197 VDKSIENSDCHGAEETTIGVQEESVRVVNSTVIGQASEGNTDKPFINISSISPIKESERI 256
Query: 181 MSR--SDNYSYLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTD 238
+SR S+N S L RQ +++T + P + Q +TH + TD
Sbjct: 257 LSREVSNNDSSL-RQTQG--HETDTEDDGFAQAPGHIGAQQETAITH-----ARPIHRTD 308
Query: 239 ISSPELDILTPDNGVPTPEHYKS 261
S+ + N PT E +KS
Sbjct: 309 DSNAAIQEFDHPNTGPTTEPFKS 331
>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
Length = 796
Score = 33.1 bits (72), Expect = 0.66
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 97 RQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSIKIRNSLAQNPAHTNSPITN 156
R+ TA+ PMS + R T+ +S +++E SGL K NP + T
Sbjct: 456 REKLTARVSPMSVGICRITESMSSN---QAEKETSGLDPKFKALEQQQSNPPRKHKFHTQ 512
Query: 157 RHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLS 191
K+P T + + S++S N LS
Sbjct: 513 DPEKTPAKRVCTSNEKNNSAAASLVSTQGNKESLS 547
>SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29)
Length = 487
Score = 33.1 bits (72), Expect = 0.66
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 3/163 (1%)
Query: 72 RRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDS 131
+R E K+S A ++ + +A + + + S+ P + +++G + ++ S
Sbjct: 226 QRDEPSLKRSTATPKKTRKTAAKDSSEVERIRGAGESSSEPSSKRSQSTKGRKNVNKAPS 285
Query: 132 GLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASK---SPIVDSIMSRSDNYS 188
G+ G + + + A + SP + +S + +SK S R + S
Sbjct: 286 GVDGPLSDASGKSSKKASSKSPKVTKVKESSITSQKAPKSSKQSSSKSTKGTKKRVEEAS 345
Query: 189 YLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESP 231
S++AL L SKE +TR T++ D P
Sbjct: 346 STSQKALPLMTVGGHSSKEAEILGDDKTEIRTRRRTNLKDSEP 388
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 32.7 bits (71), Expect = 0.87
Identities = 46/193 (23%), Positives = 74/193 (38%), Gaps = 19/193 (9%)
Query: 222 PVTHIVDESPEAVLLTDISSPELDILTPDNGVPTPEHYKSPSTRKGRATSETPDLFKKCM 281
P T ESPE T+ +PE T +PE + T + ++T+ETP+
Sbjct: 92 PETQSTTESPETQSTTE--TPETQSTTE-----SPETQSTTQTPETQSTTETPETQSTTE 144
Query: 282 IKETLYIDDEVDRESNNSSTGTYTIEGDNYTEEQKARMSIDRNFDTKLIKDEEIFKQRSR 341
ET D + +S + T + T+ N DT+ + + +R
Sbjct: 145 TPETQSTTDTPETQSPTQTPETQSTTTTPETQSTTDTRDPVNNNDTR----DPVNNNDTR 200
Query: 342 DPELILDFTQRVITKEPRRDTYLRSPVEANKGFNVPKVSKDKNVLEISCCYES-PTENDL 400
DP D T++P +T R PV N P + D + E+ T
Sbjct: 201 DPVNNRD------TRDPVNNTDTRDPVN-NTDTRDPVNNTDTETQSTTTTPETQSTTTTP 253
Query: 401 ATQTSKQIKSTRS 413
TQ++ +I T+S
Sbjct: 254 ETQSTTEIPETQS 266
>SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 31.9 bits (69), Expect = 1.5
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Query: 81 SQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYN--SEGYFSSDQEDSGLSGSIK 138
S+ R R QS+S R P A PM +K G + G SSD + K
Sbjct: 93 SRERVHRTQSLSPRDRRSWPLAFNEPMGSKKYCGLGGSSRAQSGARSSDSSEEVAKWKTK 152
Query: 139 IRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKS 174
+R SL++ A + ++ S ++ TK A KS
Sbjct: 153 LRRSLSKTDA-----LDGKYSSSQIDKLETKQAIKS 183
>SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71)
Length = 1139
Score = 31.1 bits (67), Expect = 2.7
Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 9/191 (4%)
Query: 355 TKEPRRDTYLRSPVEANKGFNVPKVSKDKNVLEISCCYESPTENDLATQTSKQIKSTRSY 414
++EPR+ +R P N+ + + L S EN+ AT T K + S +
Sbjct: 235 SQEPRQS--IRRPEGIADSVNIEAICSGQGALS---SLHSVQENN-ATSTDKTVTSKNTA 288
Query: 415 LEKIKNRVRTITEKTFAKSPPIHGEEPDFGSFTSVTTSGVLSSKNPSKLVTSSGRRCSLT 474
+EK + + T T+K+ +GE+ +V+ + VL+++ ++ + C +
Sbjct: 289 VEKKRKTLTTQTDKSCKFLKNANGEKS--SCTENVSANEVLTTQKVKEIASEQTGLCKQS 346
Query: 475 KSEIDQTDYIHXXXXXXXXXXXXXXXXXXXXNAEFESSALR-NAQKAMRDDSGVSSDITP 533
E + + AE +S ++ ++ S S I
Sbjct: 347 NKEDHRVAGLEVLSTTINSHSSLRTRASGACQAEKQSEESHVSSGRSSGQKSNESISILR 406
Query: 534 DQAVGQLSYIS 544
D +V +L+ S
Sbjct: 407 DVSVAELTQFS 417
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 31.1 bits (67), Expect = 2.7
Identities = 47/227 (20%), Positives = 98/227 (43%), Gaps = 14/227 (6%)
Query: 65 ESKPVDNRRLEQLAKKSQARHQRVQSM-----SASLTRQSPTAQRPPMSAKLPRKTQGYN 119
E+KP ++ +++K A + V ++ ASLT ++ + + ++ +
Sbjct: 2843 ENKPALQQKETEISKICAAHSETVSAIFNAARRASLTPRNDSDESDSSKERVDLDPKNTG 2902
Query: 120 SEGYFSSDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDS 179
+ ++++ +S ++ + AQ+ + T +T++ ++ S S S
Sbjct: 2903 LKYTKPLRKDNNKVSTDHELSPTFAQSTSSTPKSVTDKPNQTSDRPMSRNSNSSSSRRSS 2962
Query: 180 IMSRSD-NYSYLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTD 238
+ R+D N S SR L ++ + TP +++ ++ + PE+ L ++
Sbjct: 2963 LTPRNDSNGSNTSRYQPGSHLSKSSSPRRYSLTPRHDS-----NSSNTSEGRPESQL-SN 3016
Query: 239 ISSPELDILTPDNGVPTPEHY-KSPSTR-KGRATSETPDLFKKCMIK 283
+SSP LTP TPE +S S K R++S D +IK
Sbjct: 3017 VSSPRRSSLTPRRNSGTPESLDRSMSPHDKSRSSSALSDEGFNALIK 3063
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 30.7 bits (66), Expect = 3.5
Identities = 46/218 (21%), Positives = 75/218 (34%), Gaps = 7/218 (3%)
Query: 64 GESKPVDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGY 123
G+ +PV N + + S R + QSP++ R +S R G E
Sbjct: 213 GKPRPVGNASVVRSPADSFRREKSDVVTVRGRGTQSPSSPRREISDLKSRSPSGVRREKS 272
Query: 124 FSSDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSR 183
S G K NS P T S + R KS + + IV S
Sbjct: 273 -DIPFTRSKSPGGYKRENSDLVKPRATPSSVGLRREKSDLVSPRGACSRLPQIVKRENSD 331
Query: 184 SDNYSYLSRQALNLPL--KSNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISS 241
++ N+P S ++ Y+N Y ++ + D +S
Sbjct: 332 LTRPRTKAQVTQNIPTVSPSRVCKSPSDKSQGYHNHYHVSTTNAVISTNHSQ---EDFNS 388
Query: 242 PELD-ILTPDNGVPTPEHYKSPSTRKGRATSETPDLFK 278
++ I TP + +P+ + +P K S+ P L K
Sbjct: 389 EDMSKIATPQSRIPSLNKHSTPEQTKTPPKSKIPSLGK 426
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 30.7 bits (66), Expect = 3.5
Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 11/143 (7%)
Query: 307 EGDNYTEEQKARMSIDRNFDTKLIKDEEIFKQRSRDPELILDFTQRVITKEPRRDTYLRS 366
E YTE ++ + D F + EE+ + DP+ + + + + E R +
Sbjct: 1205 EYTQYTELKEEIRAFDPTFKRAISLSEELLRDHLVDPDRAESYEKEIESLEERMNVLELK 1264
Query: 367 PVEANKGFNVPKVSK------DKNV----LEISCCYESPTENDLATQTSKQIKSTRSYLE 416
++ F+V D V +E + P DL + + KQ++S+++++
Sbjct: 1265 TMDNGTKFSVAFARHLTTRLDDAEVSLTAVESRLGQDDPGYVDLDS-SKKQLESSKAFMN 1323
Query: 417 KIKNRVRTITEKTFAKSPPIHGE 439
++ + RT+TE ++GE
Sbjct: 1324 EVSDTNRTVTEIVSEAEVLVNGE 1346
>SB_10171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 30.7 bits (66), Expect = 3.5
Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 3/134 (2%)
Query: 141 NSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALNLPLK 200
NSL H + P T RH P H ++ + + + + ++ L + L
Sbjct: 39 NSLNNTTRHNSLPNTTRHNSLPNTTRH--NSLPNTTRHNSLPNTTRHNSLPNTTRHNSLP 96
Query: 201 SNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPELDILTPDNGVP-TPEHY 259
+ T + T +N+L+ T + + + L L T N +P T H
Sbjct: 97 NTTRHNSLPNTTRHNSLHNTTRHNSLTNTTRHNSLNNTTRHNSLPNTTRHNSLPNTTRHN 156
Query: 260 KSPSTRKGRATSET 273
P+T + + T
Sbjct: 157 SPPNTTRHNSLPNT 170
Score = 30.7 bits (66), Expect = 3.5
Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 3/134 (2%)
Query: 141 NSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALNLPLK 200
NSL H + P T RH P H ++ + + + + ++ L + L
Sbjct: 48 NSLPNTTRHNSLPNTTRHNSLPNTTRH--NSLPNTTRHNSLPNTTRHNSLPNTTRHNSLP 105
Query: 201 SNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPELDILTPDNGVP-TPEHY 259
+ T +H T +N+L T + + + L L T N P T H
Sbjct: 106 NTTRHNSLHNTTRHNSLTNTTRHNSLNNTTRHNSLPNTTRHNSLPNTTRHNSPPNTTRHN 165
Query: 260 KSPSTRKGRATSET 273
P+T + + T
Sbjct: 166 SLPNTTRHNSLHNT 179
>SB_23257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 125 SSDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRS 184
SS++ED GL GS + + + N+P+ + ++P++ AS + S
Sbjct: 43 SSEEEDEGLDGSSNLVIHSLNSHSKLNTPLDRNYNETPISHQGFNSASTLTPLVCTASTE 102
Query: 185 DNYSYLS 191
+N S+L+
Sbjct: 103 ENDSHLT 109
>SB_19871| Best HMM Match : dDENN (HMM E-Value=0.15)
Length = 309
Score = 30.7 bits (66), Expect = 3.5
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 37 DEIEVGQDEKSESSTPKIHPMAFTIDFGESKPVDNRRLEQLAKKSQARHQRVQSMSASLT 96
D+ E+G + K +S P H +T+ + PV RR S + ++ +S +LT
Sbjct: 151 DDEEIGSEIKKSNSLP--HIKHYTLG-SKISPVGRRRAI-----SPGQSRKAKSFKVNLT 202
Query: 97 RQSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSGLSGSI 137
+RPP P +T S + E+SG G +
Sbjct: 203 DVKSVPRRPPPPRPNPYQTAARPRTCAMSIEIEESGSLGEV 243
>SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)
Length = 298
Score = 30.7 bits (66), Expect = 3.5
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 44 DEKSESSTPKI-HPMAFTIDFGESKPVDNRRLEQLAKKSQARHQRVQSM-SASLTRQSPT 101
++KS +S + H +D G+SKP D R+++ + + AR Q+ +S SA+ + +
Sbjct: 73 NKKSINSNSSVSHTPPVIVDSGQSKPPD-RKMKLQIETNMARRQKARSRDSANDFKGQQS 131
Query: 102 AQRPPMSAKLPRKTQGYN-------SEGYFSSDQEDSGLSGSIKIRNSLA 144
S K P+ YN + F DQE + +++N++A
Sbjct: 132 DLNGQQSRKKPKDEYEYNPLPIGKKARRKFVPDQEKDDRYWARRVKNNVA 181
>SB_6398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 30.7 bits (66), Expect = 3.5
Identities = 38/158 (24%), Positives = 59/158 (37%), Gaps = 12/158 (7%)
Query: 126 SDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRS- 184
S E +I Q+ T P+ NR I+ PVN+ T + P+ +S +
Sbjct: 1 STTETPETQSTITTETPETQSTTDTRDPVNNRDIRDPVNNTDT----RDPVNNSYTRDTV 56
Query: 185 DNYSYLSRQALNLPLKS--NTYSKEMHRTPSYNNLYQTR---PVTHIVDESPEAVLLTDI 239
+N + +R +N + +T + R P NN TR P T +PE T
Sbjct: 57 NNNNRDTRDPVNNNNRDTRDTVNNRDARDPVNNNNRDTRDTTPETQSTTATPETQSTTQT 116
Query: 240 SSPELDILTPD--NGVPTPEHYKSPSTRKGRATSETPD 275
+ T D N T + + TR +T D
Sbjct: 117 PETQSTTDTRDTVNNRDTRDPVNNRDTRDAVNNRDTRD 154
>SB_59641| Best HMM Match : PAE (HMM E-Value=0)
Length = 1252
Score = 30.3 bits (65), Expect = 4.7
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 45 EKSESSTPKIHPMAFTIDFGESKPVDNRRLEQLAKKSQARHQ----RVQSMSASLTRQSP 100
+KS S + +IH F +SKP DN+ E K+ + H + Q +ASL
Sbjct: 418 KKSSSGSGEIHHNEVKPTFNDSKPDDNKASEHNVKRLKVTHDAGSYQSQDTAASLLPPDW 477
Query: 101 TAQRPPMSAK 110
T+Q S +
Sbjct: 478 TSQTSNFSTQ 487
>SB_50896| Best HMM Match : TB (HMM E-Value=2.9)
Length = 159
Score = 30.3 bits (65), Expect = 4.7
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 226 IVDESPEAVLLTDISSPELDILTPDNGVPTPEHYKSPSTRKGRATSETPDLF-KKCMIKE 284
++D E + T I L + D+ V + Y SPSTRK A T D +K +++
Sbjct: 81 VLDALDEGCIGTAICEKHLKVADNDDEVTSNPKYTSPSTRKRSARPVTHDRSEEKELLRR 140
Query: 285 TLYIDDEVDRESNNSS 300
+++ S N++
Sbjct: 141 VSLLEENTVLRSKNAA 156
>SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 30.3 bits (65), Expect = 4.7
Identities = 41/207 (19%), Positives = 70/207 (33%), Gaps = 14/207 (6%)
Query: 146 NPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSRQALNLPLKS---- 201
N T PI NR + PVN+ T+ + ++ +D ++ P+ +
Sbjct: 109 NNRDTRDPINNRDTRDPVNNTDTRDPVNNSYTRDTVNNTDTRDPVNNNDTRDPVNNRDTR 168
Query: 202 ---NTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSP--ELDILTPDNGVPTP 256
N R P ++ +T P T E+ E TD P D N T
Sbjct: 169 DPVNNRDTRDPRHPRHSQQTET-PETQSTTETSETQSSTDTREPVNNRDTRETVNNRDTR 227
Query: 257 EHYKSPSTRKGRATSETPDLFKKCMIKETLYIDDEVDRESNNSSTGTYTIEGDNYTEEQK 316
+ + TR +T D ++ + D D +N + T T +
Sbjct: 228 DTVNNRDTRDPVNNRDTQDPINNRDTRDPVNNRDTRDPINNRDTRDTVNNRDTRDTVSNR 287
Query: 317 ARMSIDRNFDTKLIKDEEIFKQRSRDP 343
N DT+ + + + +RDP
Sbjct: 288 DTRDTVNNRDTR----DTVNNRDTRDP 310
>SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83)
Length = 333
Score = 30.3 bits (65), Expect = 4.7
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 393 ESPTENDLATQTSKQIKSTRSYLEKIKNRVRTITEKTFAKSPPI 436
E E D+ Q SK+++ L + K R+ ++ ++ ++PP+
Sbjct: 177 EIQNETDIGLQKSKRLQEMELELREYKQRLSSVAKRVIPRTPPL 220
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 29.9 bits (64), Expect = 6.2
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 64 GESKPVDNRRLEQLAKKS-QARHQRVQSMSASLTRQSPTAQR---PPMSAKLPRKTQGYN 119
GE K V+ L+ K + +HQR Q + + +S + P ++ +LPR+ Y+
Sbjct: 1256 GEEKTVNRGELQVCLKAILETQHQRRQQRATAEGGESSDEEEDGSPKLTIELPREIPSYD 1315
Query: 120 SEGYFSSDQEDSGLSGSIKIRNSLAQNPAHTN 151
S S E+ + R++ + H+N
Sbjct: 1316 SHESSDSSSEEEATAPPPPRRSTRSTAGKHSN 1347
>SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15)
Length = 1224
Score = 29.9 bits (64), Expect = 6.2
Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 221 RPVTHIVDES-PEAVLLTDISSPELDILTPDNGVPTPEHYKSPSTRKGRATSETPDLFKK 279
R V +I +++ P A T S D+ NG TPE SP S TP+
Sbjct: 949 RLVRYIFEKNHPHAGGNTPEGSHTHDVSNSRNGSHTPEGGNSPERSHTHDCSNTPEGGNT 1008
Query: 280 CMIKETLYIDDEVDRESNNSSTGTYTIEGDNYTE 313
T D E N+ G++T+EG N E
Sbjct: 1009 PRGSHT--HDGSNTPEGGNTHDGSHTLEGGNTPE 1040
>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
Length = 1714
Score = 29.9 bits (64), Expect = 6.2
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 275 DLFKKCMIKETLYIDDEVDRESNNSSTGTYTIEGDNYTEEQKARMSIDRNFDTKLIKDEE 334
D K+ IK T I D + R+ N T +E + +++ R +++ + +L +
Sbjct: 1546 DALKEQEIKLTAIISDLLKRDDNGPETANNPLE-QHLRGQERLREVLEKK-ERELDDMQN 1603
Query: 335 IFKQRSRDPELILDFTQRVITKEPRRDTYLRSPVEANKGFNVPKVSKDKNVLE 387
+ K+RS I + QR RD + EA+K N+ K KDK LE
Sbjct: 1604 LEKKRSA---AINELMQR-------RDMESQGLTEASKICNLEKALKDKEALE 1646
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 29.9 bits (64), Expect = 6.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 286 LYIDDEVDRESNNSSTGTYTIEGDNYTEEQKARMSID 322
+Y DDE E SS TY EGD ++++ + ++D
Sbjct: 1 MYEDDEEQEEGPKSSFSTYLAEGDVLFKQEEYQKALD 37
>SB_8607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.9 bits (64), Expect = 6.2
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 9/134 (6%)
Query: 66 SKPVDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQG-YNSEGYF 124
++P+D+R K RH V S S SP ++PP ++ KT+ +
Sbjct: 415 NEPIDDRT----RKLFTGRHH-VASDDRSPRNDSPPTRQPPEQQRVDSKTRKLFTGRPLE 469
Query: 125 SSDQEDSGLSGSIKIRNSLAQN---PAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIM 181
+SD + LS NS + P +S + H+ P T S+S +
Sbjct: 470 TSDSTELELSVDTSASNSTTHSSLPPPRVDSRTNHIHMGRPAGGRATSTESESYSSGDEL 529
Query: 182 SRSDNYSYLSRQAL 195
S S + LS +A+
Sbjct: 530 SSSLSSDALSFEAM 543
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 29.5 bits (63), Expect = 8.1
Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 8/156 (5%)
Query: 71 NRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRK--TQGYNSE--GYFSS 126
N+ L L +K +++ + S+++ R++PTA+ + ++ P K T +E +S
Sbjct: 1823 NKTLLTLQRKLESQTAEINYSSSAIARKNPTAENRALESQYPEKINTSAERTEKTPLVTS 1882
Query: 127 DQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDN 186
ED I + Q + T R ++ A ++ ++ +P D+
Sbjct: 1883 VAEDVIFKDPIIVNVYSLQRAEVKTTQDTERQF---LHSASSRSSTANP-GQKRRHTGDD 1938
Query: 187 YSYLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRP 222
+Y S+ L + Y +E+ S + T P
Sbjct: 1939 VTYTSKVRLENCVNHKDYEREIFLRESRQQQFDTLP 1974
>SB_22463| Best HMM Match : VWA (HMM E-Value=0)
Length = 1865
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 225 HIVDESPEAVLLTDISSPELDI-LTPDNGVPTPEHYKSPSTRKGRATSETP 274
++ D L++ P+LD+ LT +GV + +H K P R+G +T +P
Sbjct: 1562 NVGDMGTRVSLISYGEKPKLDLKLTGISGVNSDKHRKVPEPREGCSTGRSP 1612
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 248 TPDNGVPTPEHYKSPSTRKGRATSETPDLFKKCMIKETLYIDDEVDRESNNSSTGTYTIE 307
T G TP + P T G A + P L K C+ + + + D+ ++++ +
Sbjct: 483 TGTTGSDTPT--RPPETEPGSAEASEPKLEKPCLAEFAAWFNCVSDKHADSAGDKAFATG 540
Query: 308 GDNYTEEQKARMSIDRNFDTKLIKDEEIFKQRSRDP 343
D++ E +++ N D + E++ +Q S DP
Sbjct: 541 PDDFMPE----TNLEDNTDDDVPITEDVNEQES-DP 571
>SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89)
Length = 1328
Score = 29.5 bits (63), Expect = 8.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 378 KVSKDKNVLEISCC--YESPTENDLATQTSKQ-IKSTRSYLEKIKNRVRTITEKTFAKSP 434
++SKD VL C YE E L + + + + ++Y+E+++N EK ++
Sbjct: 522 RMSKDHQVLNKMLCEEYEKIAEKALTSPANTEHLMELKNYIEQVENETIFDLEKRLVETK 581
Query: 435 PIHGEEPDFGSFT 447
G D+ SF+
Sbjct: 582 SRLGFLVDYASFS 594
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 29.5 bits (63), Expect = 8.1
Identities = 54/216 (25%), Positives = 81/216 (37%), Gaps = 17/216 (7%)
Query: 65 ESKPVDNRR-LEQLAKKSQARHQRVQSMSASL--------TRQSPTAQRPPMSAKLPRKT 115
E K D RR E L K+Q H +S +S TR++ + RP A +
Sbjct: 311 EVKLQDKRRQFETLDYKAQRLHSSGKSFDSSANSIPLSTSTRRAESKPRPKSEAFNYLRY 370
Query: 116 QGYNSEGYFSSDQEDSGLSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSP 175
Q E + + + + +S A +PA + SP SPVN +H +K
Sbjct: 371 QDDGIEKSVTPSVATTRVESGREFMDSGAHSPARSLSPAPPSRGYSPVNVIRRQHDNKE- 429
Query: 176 IVDSIMSRSDNYSYLSRQALNLPLKSNTYSKEMHRTPSYNNLYQTRPVTHIVDESPEAVL 235
+S+ YS + A + K N + E++ + T T VD A L
Sbjct: 430 --TKERPKSEQYSSFAAAAAS-ENKENAKAAELNYKDFV--VPPTIKQTERVDRY-NAAL 483
Query: 236 LTDISSPELDILTPDNGVPTPEHYKSPSTRKGRATS 271
+ PE + GVP P ST + TS
Sbjct: 484 VELSKDPEPKAVVDPTGVP-PRRKSRTSTEWIKVTS 518
>SB_9603| Best HMM Match : Extensin_2 (HMM E-Value=0.0058)
Length = 339
Score = 29.5 bits (63), Expect = 8.1
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 16/181 (8%)
Query: 74 LEQLAKKSQARHQRVQSMSASLTR-QSPTAQRPPMSAKLPRKTQGYNSEGYFSSDQEDSG 132
+ L+ S RH QS L S T+Q P MSA T + + S+
Sbjct: 141 VRHLSTSSHVRHLLTQSCPPPLNPVMSATSQPPVMSA-----TSQLSHVRHLSTSSHVRH 195
Query: 133 LSGSIKIRNSLAQNPAHTNSPITNRHIKSPVNDAHTKHASKSPIVDSIMSRSDNYSYLSR 192
LS S + + +H T+ H++ +H +H S S V + ++S L+
Sbjct: 196 LSTSSHVHH--LSTSSHVRHLSTSSHVRHLSTSSHVRHLSTSSHVLHLSTQSCP-PPLNL 252
Query: 193 QALNLPLKSNTYSKEM-------HRTPSYNNLYQTRPVTHIVDESPEAVLLTDISSPELD 245
Q+ PL S ++ + P + Q V H+ S L T SP L+
Sbjct: 253 QSCPPPLNSVMFATSQPPVMFATSQPPLMSATSQLSHVRHLSTSSHVRHLSTQSCSPPLN 312
Query: 246 I 246
+
Sbjct: 313 L 313
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 283 KETLYIDDEVDRESNNSSTGTYTIEGDNYTEEQKARMSIDRNFDT-KLIKDEEIFKQRSR 341
KET YI + + + +N + G++Y ++ + +D+ T K K++E ++ +
Sbjct: 795 KETEYIPEADEYDPDNDPVIQAMLAGEDYDPPEEQKGKVDKGKGTEKQEKEKEKIQKEEK 854
Query: 342 DPE 344
+PE
Sbjct: 855 EPE 857
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 29.5 bits (63), Expect = 8.1
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 65 ESKPVDNRRLEQLAKKSQARHQRVQSMSASLTRQSPTAQRPPMSAKLPRKTQGYNSEGYF 124
+ + + ++L Q + Q + Q+ Q + Q+ + AK+ +TQ +EG
Sbjct: 408 QQQQLQQQQLLQQQELLQQQQQQQQEQQSQRQASEIAQQQAEIKAKIDEETQRKMAEGGS 467
Query: 125 SSDQEDSGLSGS 136
S +E+ +SGS
Sbjct: 468 ISHEENMSISGS 479
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.125 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,148,286
Number of Sequences: 59808
Number of extensions: 874474
Number of successful extensions: 2330
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2244
Number of HSP's gapped (non-prelim): 97
length of query: 603
length of database: 16,821,457
effective HSP length: 86
effective length of query: 517
effective length of database: 11,677,969
effective search space: 6037509973
effective search space used: 6037509973
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 63 (29.5 bits)
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