GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000075-TA|BGIBMGA000075-PA|undefined
         (603 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          27   1.4  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        27   1.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   2.5  

>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 1.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 320 SIDRNFDTKLIKDEEIFKQRSRDPELI 346
           S+D+N   K+ +DEE  K  +RD  L+
Sbjct: 57  SLDKNHKKKIERDEEKLKNNNRDLSLV 83


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 292 VDRESNNSSTGTYTIEGDNYTEEQKARMSIDRNFDTKLIKDEEIFKQRSRDPELILDFTQ 351
           VD ++ + +       GD   E+++   +  R     +I+++++  QR R  ELI +  Q
Sbjct: 219 VDTQTLSQANHWLKSHGDRLLEDRQRFDNYKRELKETMIRNQQL--QRQRKQELIAEEQQ 276

Query: 352 --RVITKEPRRDTYL-RSPVEANK 372
              VI  E RR     R+ +EA+K
Sbjct: 277 SLEVIEGEMRRQQEQDRAALEASK 300


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 287  YIDDEVDRESNNSSTGTYTIEGD 309
            ++  E D ES NSS  T TI+G+
Sbjct: 1342 FVLQEPDNESENSSNTTLTIQGE 1364


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.309    0.125    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,931
Number of Sequences: 2123
Number of extensions: 22657
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 3
length of query: 603
length of database: 516,269
effective HSP length: 68
effective length of query: 535
effective length of database: 371,905
effective search space: 198969175
effective search space used: 198969175
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 51 (24.6 bits)