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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000073-TA|BGIBMGA000073-PA|IPR004210|BESS motif
         (316 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    35   0.066
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    35   0.066
AF043704-2|AAX88816.1|  407|Caenorhabditis elegans Prion-like-(q...    33   0.27 
Z36753-7|CAA85339.1|  339|Caenorhabditis elegans Hypothetical pr...    31   0.81 
AF098497-2|AAC64978.1|  144|Caenorhabditis elegans Hypothetical ...    31   1.4  
AL132860-24|CAC42381.1|   95|Caenorhabditis elegans Hypothetical...    30   1.9  
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.       29   3.3  
AF016674-4|AAB66130.1|  287|Caenorhabditis elegans Hypothetical ...    29   3.3  
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated...    29   3.3  
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated...    29   3.3  
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated...    29   3.3  
AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical...    29   3.3  
U49945-4|AAC47924.1|  535|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF038613-12|AAB92046.3|  328|Caenorhabditis elegans Hypothetical...    29   4.3  
Z69360-7|CAA93282.1|  599|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U80437-19|AAB37630.2|  580|Caenorhabditis elegans Conserved olig...    29   5.7  
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin pro...    29   5.7  
U55365-3|AAA98570.1|  127|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL034543-3|CAA22517.1|  282|Caenorhabditis elegans Hypothetical ...    28   7.6  
AL034393-27|CAH19090.1|  710|Caenorhabditis elegans Hypothetical...    28   7.6  
AL021176-2|CAA15974.2|  267|Caenorhabditis elegans Hypothetical ...    28   7.6  
AL008866-2|CAA15508.2|  710|Caenorhabditis elegans Hypothetical ...    28   7.6  

>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)

Query: 8     VHEDLQTRKVSAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAP 67
             +  +  T+K  A  ++ E+QK     A++  IE   EQ + +Q++     E   S +   
Sbjct: 13558 LESEAATKKADAEKLKLEEQKKKA--AEIALIEIQKEQEKLAQEQSRLEDEAKKSAEKQK 13615

Query: 68    PEDVIPKIKTEVIDK-PLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDD 126
              E      +TE   K  +D K K +V  +    +K + ++  K+ S +  +DA   L  D
Sbjct: 13616 LESETKSKQTEEAPKESVDEKPKKKVLKK--KTEKSDSSISQKSKSAKSTVDAAETLESD 13673


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)

Query: 8     VHEDLQTRKVSAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAP 67
             +  +  T+K  A  ++ E+QK     A++  IE   EQ + +Q++     E   S +   
Sbjct: 13558 LESEAATKKADAEKLKLEEQKKKA--AEIALIEIQKEQEKLAQEQSRLEDEAKKSAEKQK 13615

Query: 68    PEDVIPKIKTEVIDK-PLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDD 126
              E      +TE   K  +D K K +V  +    +K + ++  K+ S +  +DA   L  D
Sbjct: 13616 LESETKSKQTEEAPKESVDEKPKKKVLKK--KTEKSDSSISQKSKSAKSTVDAAETLESD 13673


>AF043704-2|AAX88816.1|  407|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 72
           protein.
          Length = 407

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 67  PPEDVIPKIKTEVIDKPLDLKTKAEVTDRPDTVDKCNQT-VIDKNPSLEIKIDANSILPD 125
           PP   +P    E+I +P   +T    T   +T    ++   + +  + E+  D    LPD
Sbjct: 243 PPTTTVPSTTLELITEPTSTETIPITTTTAETTTTTSEEPTVTEETTTELVTDVTIALPD 302

Query: 126 DHFDD 130
           + F+D
Sbjct: 303 EEFED 307


>Z36753-7|CAA85339.1|  339|Caenorhabditis elegans Hypothetical
           protein T09A5.8 protein.
          Length = 339

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 22  VRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEV-I 80
           ++S +  +S P A   + + A E     ++  +  S    +   AP  DV  KI ++V +
Sbjct: 152 LKSYEATVSGPVAPNNAKKAAMEVRDTRRNWLDEESSDDEAETTAPLSDV-EKIASKVKV 210

Query: 81  DKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILP 124
            K ++ K + E   RP T  K  + VI K+PS      A+S++P
Sbjct: 211 VKAVEEKAE-EPVKRPSTPPKPREVVIKKDPSESPVASASSVIP 253


>AF098497-2|AAC64978.1|  144|Caenorhabditis elegans Hypothetical
           protein B0294.1 protein.
          Length = 144

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 3/102 (2%)

Query: 26  QQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKI--KTEVIDKP 83
           QQ + +P+A V+  + +     Y  ++  SF  ++N PQ+   +  + K     + ++K 
Sbjct: 42  QQNVGIPKAKVIRNQLSCFAMFYPSEQISSFGGIANIPQNQHRKQELAKADGTCQRMEKT 101

Query: 84  LDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPD 125
           L  KT+   T     +  C+Q + +   S+E   +A   LPD
Sbjct: 102 LLDKTR-PATFADTYICHCSQPLCNYPRSIEDFENAGYKLPD 142


>AL132860-24|CAC42381.1|   95|Caenorhabditis elegans Hypothetical
           protein Y56A3A.29b protein.
          Length = 95

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 52  KYESFSEVSNSPQHAPPEDVIPKIKTEVID--KPLDLKTKAEVTDRPDTVDKCNQTV 106
           K +S S   N P+  P  +   ++K   +   +P ++  K+ +TDRP    +C+Q V
Sbjct: 19  KRKSASNTENIPEKVPAGNENQEVKKMKLQAPEPTEILLKSLLTDRPSVSAECSQVV 75


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 28  KISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLDLK 87
           K+S  +  + ++  + +  +Y +   +SFS  S +     P++  PK++  VI   L L 
Sbjct: 421 KVSSSRGALSNLSNSEQNKKYGRGVTQSFSGHSLNDNDPMPKEHDPKVQPSVIISCLSLP 480

Query: 88  TKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDA 119
           T +     P +V K   T + K  S  ++I+A
Sbjct: 481 TTS-----PVSVVKPKMTGVKKTDSEIMEINA 507


>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
          Length = 6632

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 16   KVSAGPVRSEQQKISVPQADVVS-IEGATEQ-PRYSQDKYESFSEVSNSPQHAPPEDVIP 73
            K S   V+S  +K   P+  VV  ++   E+ P  + DK +S ++   SP+ +  EDV  
Sbjct: 1592 KKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKS 1651

Query: 74   KIKTE-----VIDKPLDLKTKAEVTDRPDTVDKC-NQTVIDKNP 111
              K E     V +KP    TK E +    T D+  + T  +K+P
Sbjct: 1652 PTKKEKSPEKVEEKPTS-PTKKESSPTKKTDDEVKSPTKKEKSP 1694


>AF016674-4|AAB66130.1|  287|Caenorhabditis elegans Hypothetical
           protein C03H5.3 protein.
          Length = 287

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 18  SAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKT 77
           S+  +  E ++I  P  +  S++   E  + S D +   S+  +      PE        
Sbjct: 67  SSAEIAEEHKEIVAPSQEN-SVDDDAESTQLSVDVFADPSDFEDDDDEVVPETDYEDNNE 125

Query: 78  EVIDKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDD 126
           E    P + +   E+ D  D+ D     +  KNP   I+   NS   DD
Sbjct: 126 E----PKNDQNPVEIPDNSDSDDDEPMEISSKNPVTSIENPENSDSDDD 170


>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
            protein 89, isoform a protein.
          Length = 6632

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 16   KVSAGPVRSEQQKISVPQADVVS-IEGATEQ-PRYSQDKYESFSEVSNSPQHAPPEDVIP 73
            K S   V+S  +K   P+  VV  ++   E+ P  + DK +S ++   SP+ +  EDV  
Sbjct: 1592 KKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKS 1651

Query: 74   KIKTE-----VIDKPLDLKTKAEVTDRPDTVDKC-NQTVIDKNP 111
              K E     V +KP    TK E +    T D+  + T  +K+P
Sbjct: 1652 PTKKEKSPEKVEEKPTS-PTKKESSPTKKTDDEVKSPTKKEKSP 1694


>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
            protein 89, isoform g protein.
          Length = 7122

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 16   KVSAGPVRSEQQKISVPQADVVS-IEGATEQ-PRYSQDKYESFSEVSNSPQHAPPEDVIP 73
            K S   V+S  +K   P+  VV  ++   E+ P  + DK +S ++   SP+ +  EDV  
Sbjct: 1592 KKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKS 1651

Query: 74   KIKTE-----VIDKPLDLKTKAEVTDRPDTVDKC-NQTVIDKNP 111
              K E     V +KP    TK E +    T D+  + T  +K+P
Sbjct: 1652 PTKKEKSPEKVEEKPTS-PTKKESSPTKKTDDEVKSPTKKEKSP 1694


>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
            protein 89, isoform b protein.
          Length = 8081

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 16   KVSAGPVRSEQQKISVPQADVVS-IEGATEQ-PRYSQDKYESFSEVSNSPQHAPPEDVIP 73
            K S   V+S  +K   P+  VV  ++   E+ P  + DK +S ++   SP+ +  EDV  
Sbjct: 1592 KKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKS 1651

Query: 74   KIKTE-----VIDKPLDLKTKAEVTDRPDTVDKC-NQTVIDKNP 111
              K E     V +KP    TK E +    T D+  + T  +K+P
Sbjct: 1652 PTKKEKSPEKVEEKPTS-PTKKESSPTKKTDDEVKSPTKKEKSP 1694


>AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical
           protein Y54G2A.13 protein.
          Length = 610

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 4/105 (3%)

Query: 14  TRKVSAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIP 73
           T K +  P + +  + +   +   +   AT+ P  S  K E+  E ++SPQ A      P
Sbjct: 228 TLKPTTSPQKPDSTEEATSPSQSTTTPVATQNPTTSNQKNETTDEATSSPQSAKTPVTNP 287

Query: 74  KI---KTEVIDKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEI 115
                K +  +  L L T A  T    T  +  +++I     L I
Sbjct: 288 TTSPQKPDTTEAALPL-TTATTTKATQTSHRPAESIIQPEQELPI 331


>U49945-4|AAC47924.1|  535|Caenorhabditis elegans Hypothetical
           protein C02H7.1 protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 83  PLDLKTK--AEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDDHFDDDK 132
           P  LK K  A V   P  V +    +I   P +E + D+N I+ +D  D D+
Sbjct: 330 PPKLKKKQIATVDSTPQVVVELKSEIISDAPKVETEDDSNFIMENDEEDGDR 381


>AF038613-12|AAB92046.3|  328|Caenorhabditis elegans Hypothetical
           protein F42A6.1 protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 52  KYESFSEVSNSPQHAPPEDVIPKIKTEV-IDKP 83
           K  SF+E SN+P+ +P + ++P+  + V I KP
Sbjct: 275 KLRSFAETSNAPKASPRKSIVPRSGSIVGIQKP 307


>Z69360-7|CAA93282.1|  599|Caenorhabditis elegans Hypothetical
           protein F25H8.6 protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 21  PVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVI 80
           PV  +      P   ++++  +  Q +     ++S   + N P     ED+  K   +++
Sbjct: 256 PVAIKPPAPPTPSNSILNLSQSQNQCQNQNPMFQS-QNIKNEPTDVEEEDLEQKRSRDIL 314

Query: 81  DKPLDLKTK 89
            +P DL TK
Sbjct: 315 HRPSDLGTK 323


>U80437-19|AAB37630.2|  580|Caenorhabditis elegans Conserved
           oligomeric golgi (cog)component protein 5 protein.
          Length = 580

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 24  SEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPK-IKTEVIDK 82
           SE    + PQ++V   + +   PR  +   +   +V    +  P  D+ P+  K  +++K
Sbjct: 83  SEASGTTTPQSEVSPSKQSEASPRKGRTPRKEKKDVEPEAEPEPEADIAPEPEKVAIVEK 142

Query: 83  PLDLKTKAE-VTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDD 126
           P   + K E +T+   +  K ++       S+E K+DA +    D
Sbjct: 143 P---EPKPEPITETEASPSKASEKDAAVEVSVE-KVDAETAQESD 183


>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
           protein F42C5.10 protein.
          Length = 1292

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 48  YSQD---KYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLDLKTKAEVTDR--PDTVDKC 102
           YS+D   KY  +   S  P  APP+   P+    V+++  DL           PD  D  
Sbjct: 390 YSRDYLEKYSDYDGTSRLPSPAPPKT--PEPAYTVLNRSEDLPHHPTHLSFSFPDYYDHA 447

Query: 103 NQTVIDKNPSLE 114
            Q ++ ++P LE
Sbjct: 448 TQIILSRDPGLE 459


>AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin
           protein 1 protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 104 QTVIDKNPSLEIKIDANSILPDDHFDDDKLFMNSLIPLFKKMSDDTR----LLCRIEVLK 159
           +  ++K  ++E+      +    HFD D + + ++   FK+ SD+ R     L RI+ ++
Sbjct: 13  EAAVNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVR 72

Query: 160 IIRYALQ 166
             R A+Q
Sbjct: 73  GGRVAMQ 79


>U55365-3|AAA98570.1|  127|Caenorhabditis elegans Hypothetical
          protein C12D5.3 protein.
          Length = 127

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 18 SAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAP 67
          S+  +   QQ +  P+A ++    +     YS ++  SF  +SN+ ++AP
Sbjct: 17 SSDAIECYQQNVGTPKARIIDNMISCFSMYYSSERIASFGGISNNFKNAP 66


>AL034543-3|CAA22517.1|  282|Caenorhabditis elegans Hypothetical
           protein Y81G3A.4 protein.
          Length = 282

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 15/128 (11%)

Query: 47  RYSQDKYESFSEVSN---SPQHAPPEDVIPKIKTEVIDKPLDLKTKAEVTDRPDTVDKCN 103
           + S+ K + F+E  N   +     P + +   K  + +K L    K E         +C+
Sbjct: 105 KLSEQKTKCFAEKCNDYAAENSFSPSNFVCIFKKSLFEKALKCLAKTEPITFLKCDHECH 164

Query: 104 QTVI------DKNPSLEIKIDANSILPDDHFDDDKL------FMNSLIPLFKKMSDDTRL 151
           + ++         P+ + +I  ++ L     + DKL      +MN ++P+ K+M DD   
Sbjct: 165 EEIVRTDHLKQSTPNNQNQIFVSTELATYETELDKLCRFQTCYMNCMVPVVKEMCDDEES 224

Query: 152 LCRIEVLK 159
              IE+++
Sbjct: 225 KSAIEIVE 232


>AL034393-27|CAH19090.1|  710|Caenorhabditis elegans Hypothetical
           protein B0019.2 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 230 SDSDEEQLSRKQCPKLKVSPVEVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAAP 289
           SD+ E +  R   P L + P  V   + + + L +   V +    +  +   ++      
Sbjct: 240 SDTYETRFHRILLPNLHIMPFHVATKAAIYQHLDE--RVPEDFWAVLQRETGVKLDDEGL 297

Query: 290 ALSSTNQPMHVSVKTEPLEDAQSQ 313
            +  +N+P+H S+++EPL++   Q
Sbjct: 298 IVEFSNRPLHFSLQSEPLDNIPEQ 321


>AL021176-2|CAA15974.2|  267|Caenorhabditis elegans Hypothetical
           protein Y43E12A.2 protein.
          Length = 267

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 21  PVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPP 68
           PV   QQ+    Q    S +G      +S  +   F+E+ +SP+  PP
Sbjct: 103 PVPEVQQQREQAQVSQTSAQGLAAVDGFSMAEIAGFAELLSSPKKTPP 150


>AL008866-2|CAA15508.2|  710|Caenorhabditis elegans Hypothetical
           protein B0019.2 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 230 SDSDEEQLSRKQCPKLKVSPVEVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAAP 289
           SD+ E +  R   P L + P  V   + + + L +   V +    +  +   ++      
Sbjct: 240 SDTYETRFHRILLPNLHIMPFHVATKAAIYQHLDE--RVPEDFWAVLQRETGVKLDDEGL 297

Query: 290 ALSSTNQPMHVSVKTEPLEDAQSQ 313
            +  +N+P+H S+++EPL++   Q
Sbjct: 298 IVEFSNRPLHFSLQSEPLDNIPEQ 321


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.312    0.127    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,151,066
Number of Sequences: 27539
Number of extensions: 293642
Number of successful extensions: 733
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 715
Number of HSP's gapped (non-prelim): 40
length of query: 316
length of database: 12,573,161
effective HSP length: 81
effective length of query: 235
effective length of database: 10,342,502
effective search space: 2430487970
effective search space used: 2430487970
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)

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