BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000073-TA|BGIBMGA000073-PA|IPR004210|BESS motif (316 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 35 0.066 AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 35 0.066 AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 33 0.27 Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 31 0.81 AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical ... 31 1.4 AL132860-24|CAC42381.1| 95|Caenorhabditis elegans Hypothetical... 30 1.9 Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 29 3.3 U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.3 AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical ... 29 3.3 AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.3 AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.3 AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.3 AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 3.3 U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 29 4.3 AF038613-12|AAB92046.3| 328|Caenorhabditis elegans Hypothetical... 29 4.3 Z69360-7|CAA93282.1| 599|Caenorhabditis elegans Hypothetical pr... 29 5.7 U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 29 5.7 U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 5.7 AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 29 5.7 U55365-3|AAA98570.1| 127|Caenorhabditis elegans Hypothetical pr... 28 7.6 AL034543-3|CAA22517.1| 282|Caenorhabditis elegans Hypothetical ... 28 7.6 AL034393-27|CAH19090.1| 710|Caenorhabditis elegans Hypothetical... 28 7.6 AL021176-2|CAA15974.2| 267|Caenorhabditis elegans Hypothetical ... 28 7.6 AL008866-2|CAA15508.2| 710|Caenorhabditis elegans Hypothetical ... 28 7.6 >AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein protein. Length = 18519 Score = 35.1 bits (77), Expect = 0.066 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%) Query: 8 VHEDLQTRKVSAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAP 67 + + T+K A ++ E+QK A++ IE EQ + +Q++ E S + Sbjct: 13558 LESEAATKKADAEKLKLEEQKKKA--AEIALIEIQKEQEKLAQEQSRLEDEAKKSAEKQK 13615 Query: 68 PEDVIPKIKTEVIDK-PLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDD 126 E +TE K +D K K +V + +K + ++ K+ S + +DA L D Sbjct: 13616 LESETKSKQTEEAPKESVDEKPKKKVLKK--KTEKSDSSISQKSKSAKSTVDAAETLESD 13673 >AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein protein. Length = 18534 Score = 35.1 bits (77), Expect = 0.066 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%) Query: 8 VHEDLQTRKVSAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAP 67 + + T+K A ++ E+QK A++ IE EQ + +Q++ E S + Sbjct: 13558 LESEAATKKADAEKLKLEEQKKKA--AEIALIEIQKEQEKLAQEQSRLEDEAKKSAEKQK 13615 Query: 68 PEDVIPKIKTEVIDK-PLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDD 126 E +TE K +D K K +V + +K + ++ K+ S + +DA L D Sbjct: 13616 LESETKSKQTEEAPKESVDEKPKKKVLKK--KTEKSDSSISQKSKSAKSTVDAAETLESD 13673 >AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 72 protein. Length = 407 Score = 33.1 bits (72), Expect = 0.27 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 67 PPEDVIPKIKTEVIDKPLDLKTKAEVTDRPDTVDKCNQT-VIDKNPSLEIKIDANSILPD 125 PP +P E+I +P +T T +T ++ + + + E+ D LPD Sbjct: 243 PPTTTVPSTTLELITEPTSTETIPITTTTAETTTTTSEEPTVTEETTTELVTDVTIALPD 302 Query: 126 DHFDD 130 + F+D Sbjct: 303 EEFED 307 >Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical protein T09A5.8 protein. Length = 339 Score = 31.5 bits (68), Expect = 0.81 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 3/104 (2%) Query: 22 VRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEV-I 80 ++S + +S P A + + A E ++ + S + AP DV KI ++V + Sbjct: 152 LKSYEATVSGPVAPNNAKKAAMEVRDTRRNWLDEESSDDEAETTAPLSDV-EKIASKVKV 210 Query: 81 DKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILP 124 K ++ K + E RP T K + VI K+PS A+S++P Sbjct: 211 VKAVEEKAE-EPVKRPSTPPKPREVVIKKDPSESPVASASSVIP 253 >AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical protein B0294.1 protein. Length = 144 Score = 30.7 bits (66), Expect = 1.4 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 3/102 (2%) Query: 26 QQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKI--KTEVIDKP 83 QQ + +P+A V+ + + Y ++ SF ++N PQ+ + + K + ++K Sbjct: 42 QQNVGIPKAKVIRNQLSCFAMFYPSEQISSFGGIANIPQNQHRKQELAKADGTCQRMEKT 101 Query: 84 LDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPD 125 L KT+ T + C+Q + + S+E +A LPD Sbjct: 102 LLDKTR-PATFADTYICHCSQPLCNYPRSIEDFENAGYKLPD 142 >AL132860-24|CAC42381.1| 95|Caenorhabditis elegans Hypothetical protein Y56A3A.29b protein. Length = 95 Score = 30.3 bits (65), Expect = 1.9 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 52 KYESFSEVSNSPQHAPPEDVIPKIKTEVID--KPLDLKTKAEVTDRPDTVDKCNQTV 106 K +S S N P+ P + ++K + +P ++ K+ +TDRP +C+Q V Sbjct: 19 KRKSASNTENIPEKVPAGNENQEVKKMKLQAPEPTEILLKSLLTDRPSVSAECSQVV 75 >Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical protein F27C8.5 protein. Length = 565 Score = 29.5 bits (63), Expect = 3.3 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 5/92 (5%) Query: 28 KISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLDLK 87 K+S + + ++ + + +Y + +SFS S + P++ PK++ VI L L Sbjct: 421 KVSSSRGALSNLSNSEQNKKYGRGVTQSFSGHSLNDNDPMPKEHDPKVQPSVIISCLSLP 480 Query: 88 TKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDA 119 T + P +V K T + K S ++I+A Sbjct: 481 TTS-----PVSVVKPKMTGVKKTDSEIMEINA 507 >U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. Length = 6632 Score = 29.5 bits (63), Expect = 3.3 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 16 KVSAGPVRSEQQKISVPQADVVS-IEGATEQ-PRYSQDKYESFSEVSNSPQHAPPEDVIP 73 K S V+S +K P+ VV ++ E+ P + DK +S ++ SP+ + EDV Sbjct: 1592 KKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKS 1651 Query: 74 KIKTE-----VIDKPLDLKTKAEVTDRPDTVDKC-NQTVIDKNP 111 K E V +KP TK E + T D+ + T +K+P Sbjct: 1652 PTKKEKSPEKVEEKPTS-PTKKESSPTKKTDDEVKSPTKKEKSP 1694 >AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical protein C03H5.3 protein. Length = 287 Score = 29.5 bits (63), Expect = 3.3 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 5/109 (4%) Query: 18 SAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKT 77 S+ + E ++I P + S++ E + S D + S+ + PE Sbjct: 67 SSAEIAEEHKEIVAPSQEN-SVDDDAESTQLSVDVFADPSDFEDDDDEVVPETDYEDNNE 125 Query: 78 EVIDKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDD 126 E P + + E+ D D+ D + KNP I+ NS DD Sbjct: 126 E----PKNDQNPVEIPDNSDSDDDEPMEISSKNPVTSIENPENSDSDDD 170 >AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated protein 89, isoform a protein. Length = 6632 Score = 29.5 bits (63), Expect = 3.3 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 16 KVSAGPVRSEQQKISVPQADVVS-IEGATEQ-PRYSQDKYESFSEVSNSPQHAPPEDVIP 73 K S V+S +K P+ VV ++ E+ P + DK +S ++ SP+ + EDV Sbjct: 1592 KKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKS 1651 Query: 74 KIKTE-----VIDKPLDLKTKAEVTDRPDTVDKC-NQTVIDKNP 111 K E V +KP TK E + T D+ + T +K+P Sbjct: 1652 PTKKEKSPEKVEEKPTS-PTKKESSPTKKTDDEVKSPTKKEKSP 1694 >AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated protein 89, isoform g protein. Length = 7122 Score = 29.5 bits (63), Expect = 3.3 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 16 KVSAGPVRSEQQKISVPQADVVS-IEGATEQ-PRYSQDKYESFSEVSNSPQHAPPEDVIP 73 K S V+S +K P+ VV ++ E+ P + DK +S ++ SP+ + EDV Sbjct: 1592 KKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKS 1651 Query: 74 KIKTE-----VIDKPLDLKTKAEVTDRPDTVDKC-NQTVIDKNP 111 K E V +KP TK E + T D+ + T +K+P Sbjct: 1652 PTKKEKSPEKVEEKPTS-PTKKESSPTKKTDDEVKSPTKKEKSP 1694 >AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated protein 89, isoform b protein. Length = 8081 Score = 29.5 bits (63), Expect = 3.3 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 16 KVSAGPVRSEQQKISVPQADVVS-IEGATEQ-PRYSQDKYESFSEVSNSPQHAPPEDVIP 73 K S V+S +K P+ VV ++ E+ P + DK +S ++ SP+ + EDV Sbjct: 1592 KKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKS 1651 Query: 74 KIKTE-----VIDKPLDLKTKAEVTDRPDTVDKC-NQTVIDKNP 111 K E V +KP TK E + T D+ + T +K+P Sbjct: 1652 PTKKEKSPEKVEEKPTS-PTKKESSPTKKTDDEVKSPTKKEKSP 1694 >AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical protein Y54G2A.13 protein. Length = 610 Score = 29.5 bits (63), Expect = 3.3 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 4/105 (3%) Query: 14 TRKVSAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIP 73 T K + P + + + + + + AT+ P S K E+ E ++SPQ A P Sbjct: 228 TLKPTTSPQKPDSTEEATSPSQSTTTPVATQNPTTSNQKNETTDEATSSPQSAKTPVTNP 287 Query: 74 KI---KTEVIDKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEI 115 K + + L L T A T T + +++I L I Sbjct: 288 TTSPQKPDTTEAALPL-TTATTTKATQTSHRPAESIIQPEQELPI 331 >U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical protein C02H7.1 protein. Length = 535 Score = 29.1 bits (62), Expect = 4.3 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 83 PLDLKTK--AEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDDHFDDDK 132 P LK K A V P V + +I P +E + D+N I+ +D D D+ Sbjct: 330 PPKLKKKQIATVDSTPQVVVELKSEIISDAPKVETEDDSNFIMENDEEDGDR 381 >AF038613-12|AAB92046.3| 328|Caenorhabditis elegans Hypothetical protein F42A6.1 protein. Length = 328 Score = 29.1 bits (62), Expect = 4.3 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query: 52 KYESFSEVSNSPQHAPPEDVIPKIKTEV-IDKP 83 K SF+E SN+P+ +P + ++P+ + V I KP Sbjct: 275 KLRSFAETSNAPKASPRKSIVPRSGSIVGIQKP 307 >Z69360-7|CAA93282.1| 599|Caenorhabditis elegans Hypothetical protein F25H8.6 protein. Length = 599 Score = 28.7 bits (61), Expect = 5.7 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 21 PVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVI 80 PV + P ++++ + Q + ++S + N P ED+ K +++ Sbjct: 256 PVAIKPPAPPTPSNSILNLSQSQNQCQNQNPMFQS-QNIKNEPTDVEEEDLEQKRSRDIL 314 Query: 81 DKPLDLKTK 89 +P DL TK Sbjct: 315 HRPSDLGTK 323 >U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved oligomeric golgi (cog)component protein 5 protein. Length = 580 Score = 28.7 bits (61), Expect = 5.7 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 24 SEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPK-IKTEVIDK 82 SE + PQ++V + + PR + + +V + P D+ P+ K +++K Sbjct: 83 SEASGTTTPQSEVSPSKQSEASPRKGRTPRKEKKDVEPEAEPEPEADIAPEPEKVAIVEK 142 Query: 83 PLDLKTKAE-VTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDD 126 P + K E +T+ + K ++ S+E K+DA + D Sbjct: 143 P---EPKPEPITETEASPSKASEKDAAVEVSVE-KVDAETAQESD 183 >U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein F42C5.10 protein. Length = 1292 Score = 28.7 bits (61), Expect = 5.7 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%) Query: 48 YSQD---KYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLDLKTKAEVTDR--PDTVDKC 102 YS+D KY + S P APP+ P+ V+++ DL PD D Sbjct: 390 YSRDYLEKYSDYDGTSRLPSPAPPKT--PEPAYTVLNRSEDLPHHPTHLSFSFPDYYDHA 447 Query: 103 NQTVIDKNPSLE 114 Q ++ ++P LE Sbjct: 448 TQIILSRDPGLE 459 >AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin protein 1 protein. Length = 170 Score = 28.7 bits (61), Expect = 5.7 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 104 QTVIDKNPSLEIKIDANSILPDDHFDDDKLFMNSLIPLFKKMSDDTR----LLCRIEVLK 159 + ++K ++E+ + HFD D + + ++ FK+ SD+ R L RI+ ++ Sbjct: 13 EAAVNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVR 72 Query: 160 IIRYALQ 166 R A+Q Sbjct: 73 GGRVAMQ 79 >U55365-3|AAA98570.1| 127|Caenorhabditis elegans Hypothetical protein C12D5.3 protein. Length = 127 Score = 28.3 bits (60), Expect = 7.6 Identities = 13/50 (26%), Positives = 26/50 (52%) Query: 18 SAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAP 67 S+ + QQ + P+A ++ + YS ++ SF +SN+ ++AP Sbjct: 17 SSDAIECYQQNVGTPKARIIDNMISCFSMYYSSERIASFGGISNNFKNAP 66 >AL034543-3|CAA22517.1| 282|Caenorhabditis elegans Hypothetical protein Y81G3A.4 protein. Length = 282 Score = 28.3 bits (60), Expect = 7.6 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 15/128 (11%) Query: 47 RYSQDKYESFSEVSN---SPQHAPPEDVIPKIKTEVIDKPLDLKTKAEVTDRPDTVDKCN 103 + S+ K + F+E N + P + + K + +K L K E +C+ Sbjct: 105 KLSEQKTKCFAEKCNDYAAENSFSPSNFVCIFKKSLFEKALKCLAKTEPITFLKCDHECH 164 Query: 104 QTVI------DKNPSLEIKIDANSILPDDHFDDDKL------FMNSLIPLFKKMSDDTRL 151 + ++ P+ + +I ++ L + DKL +MN ++P+ K+M DD Sbjct: 165 EEIVRTDHLKQSTPNNQNQIFVSTELATYETELDKLCRFQTCYMNCMVPVVKEMCDDEES 224 Query: 152 LCRIEVLK 159 IE+++ Sbjct: 225 KSAIEIVE 232 >AL034393-27|CAH19090.1| 710|Caenorhabditis elegans Hypothetical protein B0019.2 protein. Length = 710 Score = 28.3 bits (60), Expect = 7.6 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 230 SDSDEEQLSRKQCPKLKVSPVEVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAAP 289 SD+ E + R P L + P V + + + L + V + + + ++ Sbjct: 240 SDTYETRFHRILLPNLHIMPFHVATKAAIYQHLDE--RVPEDFWAVLQRETGVKLDDEGL 297 Query: 290 ALSSTNQPMHVSVKTEPLEDAQSQ 313 + +N+P+H S+++EPL++ Q Sbjct: 298 IVEFSNRPLHFSLQSEPLDNIPEQ 321 >AL021176-2|CAA15974.2| 267|Caenorhabditis elegans Hypothetical protein Y43E12A.2 protein. Length = 267 Score = 28.3 bits (60), Expect = 7.6 Identities = 14/48 (29%), Positives = 22/48 (45%) Query: 21 PVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPP 68 PV QQ+ Q S +G +S + F+E+ +SP+ PP Sbjct: 103 PVPEVQQQREQAQVSQTSAQGLAAVDGFSMAEIAGFAELLSSPKKTPP 150 >AL008866-2|CAA15508.2| 710|Caenorhabditis elegans Hypothetical protein B0019.2 protein. Length = 710 Score = 28.3 bits (60), Expect = 7.6 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 230 SDSDEEQLSRKQCPKLKVSPVEVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAAP 289 SD+ E + R P L + P V + + + L + V + + + ++ Sbjct: 240 SDTYETRFHRILLPNLHIMPFHVATKAAIYQHLDE--RVPEDFWAVLQRETGVKLDDEGL 297 Query: 290 ALSSTNQPMHVSVKTEPLEDAQSQ 313 + +N+P+H S+++EPL++ Q Sbjct: 298 IVEFSNRPLHFSLQSEPLDNIPEQ 321 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.312 0.127 0.348 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,151,066 Number of Sequences: 27539 Number of extensions: 293642 Number of successful extensions: 733 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 715 Number of HSP's gapped (non-prelim): 40 length of query: 316 length of database: 12,573,161 effective HSP length: 81 effective length of query: 235 effective length of database: 10,342,502 effective search space: 2430487970 effective search space used: 2430487970 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.9 bits) S2: 60 (28.3 bits)
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