Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000073-TA|BGIBMGA000073-PA|IPR004210|BESS motif
(316 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 36 0.035
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 33 0.19
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 33 0.33
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 32 0.58
At4g22680.1 68417.m03273 myb family transcription factor (MYB85)... 31 0.76
At4g22745.1 68417.m03282 methyl-CpG-binding domain-containing pr... 31 1.3
At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase fa... 31 1.3
At5g53060.1 68418.m06592 KH domain-containing protein 29 4.1
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 29 5.4
At4g39745.1 68417.m05627 hydroxyproline-rich glycoprotein family... 29 5.4
At1g13640.1 68414.m01603 phosphatidylinositol 3- and 4-kinase fa... 29 5.4
At5g45230.1 68418.m05551 disease resistance protein (TIR-NBS-LRR... 28 7.1
At1g61080.1 68414.m06877 proline-rich family protein 28 7.1
At1g03710.1 68414.m00351 expressed protein 28 7.1
At5g19010.1 68418.m02258 mitogen-activated protein kinase, putat... 28 9.4
At5g07020.1 68418.m00795 proline-rich family protein 28 9.4
At4g02710.1 68417.m00366 kinase interacting family protein simil... 28 9.4
At3g30420.1 68416.m03847 hypothetical protein low similarity to ... 28 9.4
At3g18040.1 68416.m02294 mitogen-activated protein kinase, putat... 28 9.4
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 35.9 bits (79), Expect = 0.035
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 113 LEIKIDANSILPDDHFDDDKLFM--NSLIPLFKKMSDDTRLLCRIEV-LKIIRYALQGHK 169
L+I D+N + +D FDDD+ +++I + D L R EV + + R+A GHK
Sbjct: 666 LDIGFDSNKSVVEDEFDDDEKIRAEDAIIKSLLDVVSDGSPLVRAEVAVALARFAF-GHK 724
Query: 170 CFEALKVAEDSFFRDRMSGIL 190
+ LK+A S+++ + S +L
Sbjct: 725 --QHLKLAAASYWKPQSSSLL 743
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 33.5 bits (73), Expect = 0.19
Identities = 39/192 (20%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 12 LQTRKVSAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDV 71
L+T+K + P++ +++++ P+A+V + + + ++K +S + V+ + AP +
Sbjct: 89 LKTKKKESSPMKEKKEEVVKPEAEVEKKKEEAAEEKVEEEK-KSEAVVT---EEAPKAET 144
Query: 72 IPKIKTEVIDKPLDLKTKAE-VTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDDHFDD 130
+ + TE I ++ T E V + +K + V+ + E+K + + +D D
Sbjct: 145 VEAVVTEEIIPKEEVTTVVEKVEEETKEEEKKTEDVVTE----EVKAETIEVEDEDESVD 200
Query: 131 DKLFMNSLIPLFKKMSDDTRLLCRIEVLKIIRYA-LQGHKCFEALKVAEDSFFRDRMSGI 189
+ + + L K ++ T ++ +LK +R + ++ FE LK ++++ I
Sbjct: 201 KDIELWGVPLLPSKGAESTDVI----LLKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSI 256
Query: 190 LAKQ-EVDVATS 200
L ++ D+AT+
Sbjct: 257 LGEEFGEDLATA 268
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 32.7 bits (71), Expect = 0.33
Identities = 26/137 (18%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 22 VRSEQQKISVPQADVVSIEGATE--QPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEV 79
V +++I+V + ++ ++ A E + RY ++ +S ++ + + + ++K+
Sbjct: 285 VEELKEEINVARQEISQLKSAVEVTERRYHEEYIQSTLQIRTAYEQ------VDEVKSGY 338
Query: 80 IDKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDDHFDDDKLFMNSLI 139
+ +L + + T D ++ ++DK L I +D N IL + +++++N
Sbjct: 339 AQREAELGEELKKTKAER--DSLHERLMDKEAKLRILVDENEILNSKIKEKEEVYLNLEN 396
Query: 140 PLFKKMSDDTRLLCRIE 156
L + +DT L ++E
Sbjct: 397 SLNQNEPEDTGELKKLE 413
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 113 LEIKIDANSILPDDHFDDDKLFMNSLI--PLFKKMSDDTRLLCRIEVLKIIRYALQGHKC 170
L++ D+ + D+ FDDD+ + +I L +SD + L+ + + R+A GHK
Sbjct: 659 LDVGFDSGKGVCDEEFDDDENIVEDIIIKSLLDVVSDGSPLVRTEVAVALARFAF-GHK- 716
Query: 171 FEALKVAEDSFFRDRMS 187
+ LK DS+++ + S
Sbjct: 717 -QHLKSVADSYWKPQNS 732
>At4g22680.1 68417.m03273 myb family transcription factor (MYB85)
similar to myb DNA-binding protein GI:1020155 from
[Arabidopsis thaliana]
Length = 266
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 59 VSNSPQHAPPEDVIPKIKTEVIDKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKID 118
++ P + IP +V +P TK T ++ + TV D+N S+ D
Sbjct: 129 LNQEPSNIDNSKTIPSNPDDVSVEPKTTNTKYVEISVTTTEEESSSTVTDQNSSM----D 184
Query: 119 ANSILPDDHFDDDKLF 134
+ L D+ +DDD+LF
Sbjct: 185 NENHLIDNIYDDDELF 200
>At4g22745.1 68417.m03282 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 204
Score = 30.7 bits (66), Expect = 1.3
Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 8/173 (4%)
Query: 13 QTRKVSAGPVRSEQQKISVPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVI 72
+ V++ + E+Q + + ++ P S D + E + +D
Sbjct: 15 ENSSVASSGSKIEEQTEKSAEPTTIKVQKKAGTPGRSIDVFAVQCEKCMKWRKIDTQDEY 74
Query: 73 PKIKTEVIDKPLDLKTKAEVT--DRPD-TVDKCNQTVIDKN--PSLEIKIDANSILPDDH 127
I++ V + P KTK V+ D D D VIDK P + IL D+
Sbjct: 75 EDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSSRTWVIDKPGLPRTPRGFKRSLILRKDY 134
Query: 128 FDDDKLFMNSLIPLFKKMSDDTRLLCRIEVLKIIRYALQGHKCFEALKVAEDS 180
D ++ P KK+ + I+ + +YAL G F KV E++
Sbjct: 135 SKMDAYYIT---PTGKKLKSRNEIAAFIDANQDYKYALLGDFNFTVPKVMEET 184
>At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 650
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 249 PVEVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAAPALSSTNQPMHVSVKTEPLE 308
P E ++ D L S + +PL +K + RS + P LS T + + ++ P+E
Sbjct: 82 PTEESSLTYGDMVLTNDLSAVRNDSPLLLKRNFMHRSSSTPCLSPTGRDLQQKDRSGPIE 141
>At5g53060.1 68418.m06592 KH domain-containing protein
Length = 652
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 251 EVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAAPALSSTNQPMHVSVKTEPLE 308
E+PR + +++ +IQ+T + + +++ L RS LS P + T PLE
Sbjct: 448 EIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMFKELSQKETPPASTSTTGPLE 505
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 25 EQQKIS-VPQADVVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKP 83
EQ K++ V + ++ + G E+P ++ K+ F+EV PQ+ + + K V+
Sbjct: 44 EQMKVTYVHSSKMIRVTG--ERPLANR-KWSRFNEVFTVPQNCLVDKIHGSFKNNVLTIT 100
Query: 84 LDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIK 116
+ +T +V P+T + ++K LE K
Sbjct: 101 MPKETITKVAYLPET-SRTEAAALEKAAKLEEK 132
>At4g39745.1 68417.m05627 hydroxyproline-rich glycoprotein family
protein
Length = 253
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 62 SPQHAPPEDVIPKIKTEVIDKPLD 85
SP PP D IP+I+T V+ P D
Sbjct: 67 SPSSPPPPDPIPEIETYVVHVPRD 90
>At1g13640.1 68414.m01603 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 622
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 249 PVEVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAAPALSSTNQPMHVSVKTEPLE 308
P E ++ D L S + +PL +K + RS + P LS T + ++ P+E
Sbjct: 74 PTEESSLTFGDMVLKNDLSAVRNDSPLLLKRNLMHRSSSTPCLSPTGNDLQRKDRSGPIE 133
>At5g45230.1 68418.m05551 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1231
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 235 EQLSRKQCPKLKVSPVEVPRMSEMDESLIQVTSVAQMSTPLF 276
++L +C KLK+ P +M + L+ TS+A++ +F
Sbjct: 798 QELKLSRCSKLKIFPDVTAKMESLLVLLLDGTSIAELPCSIF 839
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 36 VVSIEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKP 83
+ S+E +E +KYE+ S++ P PP + IKT + P
Sbjct: 391 ISSLESTSESKLNHSEKYENSSQLFPPPPPPPPPPPLSFIKTASLPLP 438
>At1g03710.1 68414.m00351 expressed protein
Length = 202
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 67 PPEDVIPKIKTEVIDKPLDLKTKAEVTDRPDTVDKCNQ 104
P + ++ EV+D L LK KAE + D+ + C +
Sbjct: 3 PKSSDVDTVEPEVMDADLSLKRKAETIEPADSDEGCEE 40
>At5g19010.1 68418.m02258 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK16) mitogen-activated protein
kinase (MAPK)(AtMPK16), PMID:12119167; similar to
ATMPK9, Arabidopsis thaliana, EMBL:AB038694
Length = 567
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 126 DHFDDDKLFMNSLIPLFKKMSDDTRLLCRIEVLKIIRY 163
D +K+ + + +F+ +SD TR+L I++L+++R+
Sbjct: 44 DTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH 81
>At5g07020.1 68418.m00795 proline-rich family protein
Length = 235
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 248 SPVEVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAA--PALSSTN 295
S E P ++E++ SL + SVAQ T L M + + +A+ P SST+
Sbjct: 186 SVTEAPPVAELETSLPETPSVAQQETSLPETMASEAQPEASSVPTTSSTS 235
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 27.9 bits (59), Expect = 9.4
Identities = 30/138 (21%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 82 KPLDLKTKAEVTDRPDTVDKCNQTVIDK-----NPSLEIKIDANSILPDDHFDDDKLFMN 136
+ L L+ T++ D K +T+ DK +L++K + SI + H +D++ N
Sbjct: 621 RQLRLEAVGIATEKTDLEGKA-KTIGDKLTDAETENLQLKRNLLSIRSEKHHLEDEI-TN 678
Query: 137 SLIPLFKKMSDDTRLLCRIEVLKIIRYALQGHKCFEALKVAEDSFFRDRMSGILAKQEVD 196
L +K + + ++E K+I+ + K E + +FF D+ ++ + ++
Sbjct: 679 VKDQLHEKEKEFEEI--KMEKEKLIQEVFKERKQVELWESQAATFFCDKQISVVHETLIE 736
Query: 197 VATSKGAETRLSMTTRSA 214
T + AE ++ ++SA
Sbjct: 737 ATTRELAEACKNLESKSA 754
>At3g30420.1 68416.m03847 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 837
Score = 27.9 bits (59), Expect = 9.4
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 39 IEGATEQPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLDLKTKAEVTDRPDT 98
I+ E+ DK E N P + V P T +LK A +T R +T
Sbjct: 566 IDDDQEEDNIIIDKNLLLPETEN-PLEVLCQSVSPDF-TNTFQDLENLKGTAVLTPRNET 623
Query: 99 VDKCNQTVIDKNPSLEIK-IDANSILPDDHFDDDKLFMN 136
VD+ N ++ K P L + A+SI D+ ++ M+
Sbjct: 624 VDEINDYLLSKVPGLAKEYFSADSIDQDEALTEEGFEMS 662
>At3g18040.1 68416.m02294 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK9) identical to ATMPK9 [Arabidopsis
thaliana] gi|7106544|dbj|BAA92223; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to blast
and wounding induced mitogen-activated protein kinase
(BWMK1) GB:AAD52659 [Oryza sativa]; contains Pfam
profile: PF00069 Eukaryotic protein kinase domain
Length = 510
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 126 DHFDDDKLFMNSLIPLFKKMSDDTRLLCRIEVLKIIRY 163
D +K+ + + +F+ +SD TR+L I++L+++R+
Sbjct: 42 DTHSGEKVAIKKINDVFEHVSDATRILREIKLLRLLRH 79
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.127 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,703,675
Number of Sequences: 28952
Number of extensions: 268494
Number of successful extensions: 682
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 670
Number of HSP's gapped (non-prelim): 20
length of query: 316
length of database: 12,070,560
effective HSP length: 81
effective length of query: 235
effective length of database: 9,725,448
effective search space: 2285480280
effective search space used: 2285480280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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