Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000072-TA|BGIBMGA000072-PA|IPR000408|Regulator of
chromosome condensation, RCC1, IPR009091|Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II
(506 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g63860.1 68418.m08016 UVB-resistance protein (UVR8) identical... 137 1e-32
At5g16040.1 68418.m01875 regulator of chromosome condensation (R... 126 3e-29
At3g02510.1 68416.m00239 regulator of chromosome condensation (R... 125 8e-29
At5g19420.1 68418.m02314 zinc finger protein, putative / regulat... 116 5e-26
At5g12350.1 68418.m01453 zinc finger protein, putative / regulat... 116 5e-26
At5g42140.1 68418.m05130 zinc finger protein, putative / regulat... 113 3e-25
At5g48330.1 68418.m05970 regulator of chromosome condensation (R... 108 1e-23
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 108 1e-23
At5g60870.1 68418.m07636 regulator of chromosome condensation (R... 101 1e-21
At5g08710.1 68418.m01035 regulator of chromosome condensation (R... 101 1e-21
At1g65920.1 68414.m07480 regulator of chromosome condensation (R... 98 1e-20
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR... 96 6e-20
At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator... 96 6e-20
At3g55580.1 68416.m06171 regulator of chromosome condensation (R... 94 2e-19
At3g23270.1 68416.m02933 regulator of chromosome condensation (R... 94 2e-19
At5g60870.2 68418.m07635 regulator of chromosome condensation (R... 92 7e-19
At1g27060.1 68414.m03299 regulator of chromosome condensation (R... 92 9e-19
At3g26100.2 68416.m03250 regulator of chromosome condensation (R... 91 2e-18
At3g26100.1 68416.m03251 regulator of chromosome condensation (R... 91 2e-18
At3g47660.1 68416.m05188 regulator of chromosome condensation (R... 89 8e-18
At3g53830.1 68416.m05947 regulator of chromosome condensation (R... 81 2e-15
At3g15430.2 68416.m01958 regulator of chromosome condensation (R... 78 1e-14
At3g15430.1 68416.m01957 regulator of chromosome condensation (R... 78 1e-14
At1g19880.1 68414.m02493 regulator of chromosome condensation (R... 78 1e-14
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 73 6e-13
At3g02300.1 68416.m00212 regulator of chromosome condensation (R... 72 8e-13
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 72 1e-12
At5g11580.1 68418.m01350 UVB-resistance protein-related / regula... 68 2e-11
At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM do... 30 3.1
At3g55950.1 68416.m06217 protein kinase family protein contains ... 29 5.5
>At5g63860.1 68418.m08016 UVB-resistance protein (UVR8) identical to
UVB-resistance protein UVR8 (GI:5478530, GB:AAD43920.1)
[Arabidopsis thaliana]; contains Pfam 00415: Regulator
of chromosome condensation (RCC1)
Length = 440
Score = 137 bits (332), Expect = 1e-32
Identities = 106/364 (29%), Positives = 178/364 (48%), Gaps = 31/364 (8%)
Query: 46 VLTCGQGDVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSG-KIWTFGC 103
V + G+G+ GQLG G D + ++AL G +IV V G HT+A SG +++++G
Sbjct: 36 VCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGW 94
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSM 163
D G LG S++ P + GDSH A+ G+V +WG R+ +G +
Sbjct: 95 GDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG--RNQNGQL 152
Query: 164 GLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQR 223
GL E + ++ G +A+G +H +T G ++ G G G LG L R
Sbjct: 153 GL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG-LGDR 209
Query: 224 SASRDARQGFSALLVPARVTLR--QAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGI 281
+ LVP RVT + + V G T + A L+ +G + YGQLG
Sbjct: 210 TDR----------LVPERVTSTGGEKMSMVACGWRHTISVSYSGA-LYTYGWSKYGQLG- 257
Query: 282 TGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLG 341
G+ + P + +AL + S ++ G HT+ L ++G++Y G ++G++G+G
Sbjct: 258 HGDLEDHLI--PHKLEAL----SNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 311
Query: 342 DKSGDAETLEL-IPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLN 400
+ +++ P ++K + ++ G ++ AVT+ V++WG G+ G+LG GES D N
Sbjct: 312 NNLDQCSPVQVRFP--DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369
Query: 401 EPTL 404
P +
Sbjct: 370 FPKI 373
Score = 118 bits (283), Expect = 1e-26
Identities = 97/362 (26%), Positives = 158/362 (43%), Gaps = 26/362 (7%)
Query: 72 VTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXX 131
VTA K++ + AG H++AL S + ++G ++G LG + ++ T
Sbjct: 10 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI 69
Query: 132 XXXXXGDSHSAALLQNG-DVYAWGSFRDSHGSMGLVVRGREGKPCKE-PVKIDIGEPAVE 189
G H+ A Q+G +VY+WG G G + G P+K G +
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWG-----WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQ 124
Query: 190 IASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAA 249
IA G H + +T G V + G + GQLG D + A +R
Sbjct: 125 IACGDSHCLAVTMEGEVQSWGRNQNGQLG-------LGDTEDSLVPQKIQAFEGIRIKMV 177
Query: 250 RVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWS 309
A H A D L+ +G YG LG+ G+ +T P + + + G + S
Sbjct: 178 AAGAEHTAAVTEDGD---LYGWGWGRYGNLGL-GD--RTDRLVP---ERVTSTGGE-KMS 227
Query: 310 AVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTS 369
VA G HT++++ +G +Y G +YG+LG GD D + L N I+ G
Sbjct: 228 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLE-DHLIPHKLEALSNSFISQISGGWR 286
Query: 370 NSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPT-LAAVDSRAPLRVSAGGQHTVLLVEE 428
++ A+T G++Y WG G++G G + D P + D + ++VS G +HT+ + E
Sbjct: 287 HTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER 346
Query: 429 TS 430
+
Sbjct: 347 NN 348
Score = 69.3 bits (162), Expect = 6e-12
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 6/192 (3%)
Query: 28 KRGAIQLEIPTAPKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGM 87
K A E A + G + G G G LGLG+ + + G+K+ V G
Sbjct: 175 KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 88 HTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQN 147
HTI++ SG ++T+G + G LG + + G H+ AL +
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 148 GDVYAWGSFRDSHGSMGLVVRGREGKPCKE-PVKIDIGEPAVEIASGGDHLVVLTTSGGV 206
G +Y WG + G +G+ G C V+ + V+++ G H + +T V
Sbjct: 295 GKLYGWG--WNKFGQVGV---GNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349
Query: 207 FTLGCGEQGQLG 218
F G G GQLG
Sbjct: 350 FAWGRGTNGQLG 361
Score = 47.6 bits (108), Expect = 2e-05
Identities = 56/238 (23%), Positives = 90/238 (37%), Gaps = 14/238 (5%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G V + G+ GQLGLG+ K G +I V AG HT A+ G ++ +G
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSM 163
G LG ++ G H+ ++ +G +Y +G +G +
Sbjct: 199 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYG--WSKYGQL 256
Query: 164 GLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQR 223
G E ++ +I+ G H + LT+ G ++ G + GQ+G
Sbjct: 257 G--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG----- 309
Query: 224 SASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGI 281
+ Q V R Q +V G T + + +FA+G GQLGI
Sbjct: 310 -VGNNLDQ---CSPVQVRFPDDQKVVQVSCGWRHTLAV-TERNNVFAWGRGTNGQLGI 362
Score = 36.3 bits (80), Expect = 0.048
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G++ G GQ+G+G ++ + + + K+V V G HT+A+ ++ +G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 104 NDEGALGRATSNEKD 118
G LG S +++
Sbjct: 355 GTNGQLGIGESVDRN 369
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 39 APKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALD---SS 95
A +R V G+G GQLG+GE V+ K + AL VD A G H + + SS
Sbjct: 342 AVTERNNVFAWGRGTNGQLGIGES-VDRNFPKIIEALS---VD-GASGQHIESSNIDPSS 396
Query: 96 GKIW 99
GK W
Sbjct: 397 GKSW 400
>At5g16040.1 68418.m01875 regulator of chromosome condensation
(RCC1) family protein similar to UVB-resistance protein
UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam
profile PF00415: Regulator of chromosome condensation
(RCC1)
Length = 396
Score = 126 bits (304), Expect = 3e-29
Identities = 111/366 (30%), Positives = 163/366 (44%), Gaps = 36/366 (9%)
Query: 46 VLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIALDSSGKIWTFGCN 104
V+ G G+ GQLGLG D E V AL + V G +++A+ GK++T+G N
Sbjct: 7 VIAWGSGEDGQLGLGTDE-EKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 105 DEGALGRATSNEKDEGTPK--QXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGS 162
G LG K E TP + G H A+ G YAWG + +G
Sbjct: 66 QRGTLGHPPET-KTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 122
Query: 163 MGLVVRGRE-GKPCKEPVKID---IGEPAV-EIASGGDHLVVLTTSGGVFTLGCGEQGQL 217
G E G+P + + I + V ++A+GG H VVLT G V+T G
Sbjct: 123 CGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWG------- 175
Query: 218 GRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYG 277
Q D +Q + VP RV + + G L + L+A+G N YG
Sbjct: 176 ----QPWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALK-EDGTLWAWGNNEYG 226
Query: 278 QLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGR 337
QLG TG+ + + P L DD +A G H+ L G++Y GR E+GR
Sbjct: 227 QLG-TGDTQPRSY--PIPVQGL----DDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 338 LGLGDKSGDAETL-ELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGES 396
LG GD ++ L + + L + I ++ G ++S A+T G ++S+G G G+LG G
Sbjct: 280 LGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 397 EDLNEP 402
+P
Sbjct: 340 VTTGQP 345
Score = 103 bits (248), Expect = 2e-22
Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 25/339 (7%)
Query: 94 SSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAW 153
S+ + +G ++G LG T EK+ + G +S A+ +G ++ W
Sbjct: 3 SATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTW 62
Query: 154 GSFRDSHGSMGLVVRGR-EGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCG 212
G + G++G + E P VK V+ A GG H + + G + G
Sbjct: 63 GW--NQRGTLGHPPETKTESTPSL--VKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 213 EQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFG 272
E GQ G + S R +++P R + +V AG + VL +
Sbjct: 119 EYGQCGE--EPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGY------ 170
Query: 273 LNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGR 332
+ +GQ G+ ++ ++ P L V +A+G H L L +G ++A G
Sbjct: 171 VWTWGQPWPPGDIKQISV--PVRVQGLENV------RLIAVGAFHNLALKEDGTLWAWGN 222
Query: 333 CEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLG 392
EYG+LG GD + + + L + + IAAG +S A+T+ GEVY WG G G+LG
Sbjct: 223 NEYGQLGTGDTQPRSYPIP-VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLG 281
Query: 393 TGESEDLNEPTLAAVDSRAP---LRVSAGGQHTVLLVEE 428
G+++ ++ V+ A ++VS GG H+V L +
Sbjct: 282 FGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRD 320
Score = 89.0 bits (211), Expect = 6e-18
Identities = 88/318 (27%), Positives = 137/318 (43%), Gaps = 35/318 (11%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIALDSSGKIWTFG 102
G++ T G G LG + + V +L + KIV GG H +A+D G+ + +G
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 103 CNDEGALGRATSNE-------KDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGS 155
N+ G G S + +D PK+ G +HS L + G V+ WG
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Query: 156 FRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQG 215
G + K PV++ E IA G H + L G ++ G E G
Sbjct: 177 PWPP-GDI---------KQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYG 226
Query: 216 QLGRLAQRSASRDAR-QGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLN 274
QLG + S QG L TL AA W H+T + + ++ +G
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDL------TLVDIAAGGW---HSTALTN--EGEVYGWGRG 275
Query: 275 NYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCE 334
+G+LG G+ K++ P + + L G+D V+ G H++ L +G+I++ GR +
Sbjct: 276 EHGRLGF-GDNDKSSKMLPQKVNLL--AGEDII--QVSCGGTHSVALTRDGRIFSFGRGD 330
Query: 335 YGRLGLGDKSGDAETLEL 352
+GRLG G K + LEL
Sbjct: 331 HGRLGYGRKVTTGQPLEL 348
Score = 64.9 bits (151), Expect = 1e-10
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 39 APKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIALDSSGK 97
A K+ G + G + GQLG G+ + V L D +VD+ AGG H+ AL + G+
Sbjct: 210 ALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIP-VQGLDDLTLVDIAAGGWHSTALTNEGE 268
Query: 98 IWTFGCNDEGALGRATSNEKDEGTPKQ--XXXXXXXXXXXXGDSHSAALLQNGDVYAWGS 155
++ +G + G LG +++ + P++ G +HS AL ++G ++++G
Sbjct: 269 VYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG- 327
Query: 156 FRDSHGSMGLVVRGREGKPCKEPVKI 181
R HG +G + G+P + P+ I
Sbjct: 328 -RGDHGRLGYGRKVTTGQPLELPIHI 352
Score = 56.4 bits (130), Expect = 4e-08
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 17/175 (9%)
Query: 263 AQHARLFAFGLNNYGQLGI-TGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTL 321
A + A+G GQLG+ T E+++ A + DAL +V G ++L +
Sbjct: 2 ASATSVIAWGSGEDGQLGLGTDEEKELA----SVVDALEPFNV----RSVVGGSRNSLAI 53
Query: 322 AANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVY 381
+G+++ G + G LG ++ T L+ L N K + A G + AV D G Y
Sbjct: 54 CDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY 113
Query: 382 SWGMGSEGKLGTGESED-LNEPTLAAV-------DSRAPLRVSAGGQHTVLLVEE 428
+WG G+ G S+D P + +V+AGG H+V+L E
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE 168
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 38 TAPKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL--GDKIVDVQAGGMHTIALDSS 95
TA G V G+G+ G+LG G++ + L G+ I+ V GG H++AL
Sbjct: 261 TALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRD 320
Query: 96 GKIWTFGCNDEGALG 110
G+I++FG D G LG
Sbjct: 321 GRIFSFGRGDHGRLG 335
>At3g02510.1 68416.m00239 regulator of chromosome condensation
(RCC1) family protein similar to UVB-resistance protein
UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam
profile PF00415: Regulator of chromosome condensation
(RCC1)
Length = 393
Score = 125 bits (301), Expect = 8e-29
Identities = 108/366 (29%), Positives = 166/366 (45%), Gaps = 36/366 (9%)
Query: 46 VLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIV-DVQAGGMHTIALDSSGKIWTFGCN 104
++ G G+ GQLG+G + E V AL V V +G +++A+ G ++T+G N
Sbjct: 7 IIAWGSGEDGQLGIGTNE-EKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 105 DEGALGRATSNEKDEGTPKQXXXXXXX--XXXXXGDSHSAALLQNGDVYAWGSFRDSHGS 162
G LG K E P + G H A+ G YAWG + +G
Sbjct: 66 QRGTLGHQPET-KTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 122
Query: 163 MGLV-VRGREGKPCKEPVKIDIG-EPAV---EIASGGDHLVVLTTSGGVFTLGCGEQGQL 217
G ++ G+P + + I P + ++A+GG H VVLT G V+T G
Sbjct: 123 CGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG------- 175
Query: 218 GRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYG 277
Q D +Q + VP RV + + G L+ + RL A+G N YG
Sbjct: 176 ----QPWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALE-EDGRLLAWGNNEYG 226
Query: 278 QLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGR 337
QLG TG+ + T+ P L DD +A G H+ L G++Y GR E+GR
Sbjct: 227 QLG-TGDTQPTS--HPVPVQGL----DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 338 LGLGDKSGDAETL-ELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGES 396
LGLGD ++ + + + L + I ++ G ++S A+T G ++S+G G G+LG G
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 397 EDLNEP 402
+P
Sbjct: 340 VTTGQP 345
Score = 105 bits (251), Expect = 9e-23
Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 27/336 (8%)
Query: 98 IWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFR 157
I +G ++G LG T+ EK+ + G +S A+ +G ++ WG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW-- 64
Query: 158 DSHGSMGLVVRGR-EGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQ 216
+ G++G + E P + VK + A GG H + + G + G E GQ
Sbjct: 65 NQRGTLGHQPETKTENIPSR--VKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122
Query: 217 LGRLAQRSA-SRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNN 275
G + R R+ +++P R + +V AG + VL + ++
Sbjct: 123 CGEEPLKDEMGRPVRRD---IVIPKRCAPKLTVRQVAAGGTHSVVL-TREGHVWT----- 173
Query: 276 YGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEY 335
+GQ G+ ++ ++ P L V +A+G H L L +G++ A G EY
Sbjct: 174 WGQPWPPGDIKQISV--PVRVQGLENV------RLIAVGAFHNLALEEDGRLLAWGNNEY 225
Query: 336 GRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGE 395
G+LG GD + + + L + + IAAG +S A+TD GEVY WG G G+LG G+
Sbjct: 226 GQLGTGDTQPTSHPVP-VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGD 284
Query: 396 SEDLNEPTLAAVDSRAP---LRVSAGGQHTVLLVEE 428
++ ++ V+ A ++VS GG H+V L +
Sbjct: 285 NDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRD 320
Score = 85.0 bits (201), Expect = 1e-16
Identities = 87/322 (27%), Positives = 133/322 (41%), Gaps = 35/322 (10%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIALDSSGKIWTFG 102
G + T G G LG + V AL + KI GG H +A+D G+ + +G
Sbjct: 57 GTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 103 CNDEGALGRATSNE-------KDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGS 155
N+ G G + +D PK+ G +HS L + G V+ WG
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 156 FRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQG 215
G + K PV++ E IA G H + L G + G E G
Sbjct: 177 PWPP-GDI---------KQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYG 226
Query: 216 QLGRLAQRSASRDAR-QGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLN 274
QLG + S QG L TL AA W H+T + D ++ +G
Sbjct: 227 QLGTGDTQPTSHPVPVQGLDDL------TLVDIAAGGW---HSTALTDK--GEVYGWGRG 275
Query: 275 NYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCE 334
+G+LG+ G+ K++ P + + L + V+ G H++ L +G+I++ GR +
Sbjct: 276 EHGRLGL-GDNDKSSKMVPQKVNLLA----EEDIIQVSCGGTHSVALTRDGRIFSFGRGD 330
Query: 335 YGRLGLGDKSGDAETLELIPKL 356
+GRLG G K + LEL K+
Sbjct: 331 HGRLGYGRKVTTGQPLELPIKI 352
Score = 72.9 bits (171), Expect = 4e-13
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 39 APKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIALDSSGK 97
A ++ GR+L G + GQLG G D T+ V L D +VD+ AGG H+ AL G+
Sbjct: 210 ALEEDGRLLAWGNNEYGQLGTG-DTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGE 268
Query: 98 IWTFGCNDEGALGRATSNEKDEGTPKQ--XXXXXXXXXXXXGDSHSAALLQNGDVYAWGS 155
++ +G + G LG +++ + P++ G +HS AL ++G ++++G
Sbjct: 269 VYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFG- 327
Query: 156 FRDSHGSMGLVVRGREGKPCKEPVKI 181
R HG +G + G+P + P+KI
Sbjct: 328 -RGDHGRLGYGRKVTTGQPLELPIKI 352
Score = 51.2 bits (117), Expect = 2e-06
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 38 TAPKKRGRVLTCGQGDVGQLGLGE-DVVETTKFKYVTALGDK-IVDVQAGGMHTIALDSS 95
TA +G V G+G+ G+LGLG+ D + V L ++ I+ V GG H++AL
Sbjct: 261 TALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRD 320
Query: 96 GKIWTFGCNDEGALG 110
G+I++FG D G LG
Sbjct: 321 GRIFSFGRGDHGRLG 335
>At5g19420.1 68418.m02314 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1124
Score = 116 bits (278), Expect = 5e-26
Identities = 92/333 (27%), Positives = 144/333 (43%), Gaps = 23/333 (6%)
Query: 79 IVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGD 138
+ ++ GG H + + G+ +++G EG LG + G+
Sbjct: 333 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGE 392
Query: 139 SHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDI---GEPAVEIASGGD 195
HS A+ +GD+Y WG G G++ G E P +++ G IA G
Sbjct: 393 YHSCAVTLSGDLYTWGK-----GDFGILGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPY 446
Query: 196 HLVVLTTSGGVFTLGCGEQGQLGRLAQRSA----SRDARQGFSALLVPARVTLRQAAARV 251
H V+T++G +FT G G G LG ++S D+ +G + V A V
Sbjct: 447 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 506
Query: 252 WAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAV 311
G ++ + +LF +G + +LG G+K + PT AL + + V
Sbjct: 507 MVGSSSSS--NCSSGKLFTWGDGDKSRLG-HGDKEPKLV--PTCVAALV----EPNFCQV 557
Query: 312 ALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNS 371
A G T+ L +G +Y +G YG+LG G T + KL IA G +
Sbjct: 558 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPT-RVDGKLHKSFVEEIACGAYHV 616
Query: 372 FAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTL 404
+T EVY+WG GS G+LG G+++D N PTL
Sbjct: 617 AVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTL 649
Score = 62.1 bits (144), Expect = 8e-10
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 30/262 (11%)
Query: 190 IASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAA 249
IA GG H V++T G F+ G +G+LG + L+ A T
Sbjct: 336 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPK-------LIDALNTTNIELV 388
Query: 250 RVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWS 309
H L L+ +G G GI G + + + P + L + H S
Sbjct: 389 ACGEYHSCAVTLSGD---LYTWGK---GDFGILGHGNEVSHWVPKRVNFL--MEGIHV-S 439
Query: 310 AVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTS 369
++A G +HT + + GQ++ G +G LG GD+ E + L+ + + A G
Sbjct: 440 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPRE-VDSLKGLRTVRAACGVW 498
Query: 370 NSFAVTD------------SGEVYSWGMGSEGKLGTGESEDLNEPT-LAAVDSRAPLRVS 416
++ AV + SG++++WG G + +LG G+ E PT +AA+ +V+
Sbjct: 499 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVA 558
Query: 417 AGGQHTVLLVEETSSQREPSPI 438
G TV L SP+
Sbjct: 559 CGHSLTVALTTSGHVYTMGSPV 580
Score = 54.0 bits (124), Expect = 2e-07
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL--GDKIVDVQAGGMHTIALDSSGKIWTF 101
G + T G+GD G LG G +V K V L G + + G HT + S+G+++TF
Sbjct: 402 GDLYTWGKGDFGILGHGNEVSHWVP-KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTF 460
Query: 102 GCNDEGALGRATSNEKDEGTPKQ--XXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDS 159
G G LG + K P++ G H+AA+++ V + S S
Sbjct: 461 GDGTFGVLGH--GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE-VMVGSSSSSNCS 517
Query: 160 HGSM---GLVVRGREGKPCKEPVKID-----IGEP-AVEIASGGDHLVVLTTSGGVFTLG 210
G + G + R G KEP + + EP ++A G V LTTSG V+T+G
Sbjct: 518 SGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMG 577
Query: 211 CGEQGQLG 218
GQLG
Sbjct: 578 SPVYGQLG 585
Score = 41.9 bits (94), Expect = 0.001
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 363 SIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQH 421
+IA G ++ VT GE +SWG SEG+LG G ++ P L + + + A G++
Sbjct: 335 NIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEY 393
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 378 GEVYSWGMG-SEGKLG-----TGESEDLNEPTLA--AVDSRAPL---RVSAGGQHTVLLV 426
G+V+ WG G EG LG G S ++ +L A++S L ++ GGQH VL+
Sbjct: 288 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 347
Query: 427 EETSS 431
++ S
Sbjct: 348 KQGES 352
>At5g12350.1 68418.m01453 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1062
Score = 116 bits (278), Expect = 5e-26
Identities = 92/334 (27%), Positives = 146/334 (43%), Gaps = 25/334 (7%)
Query: 79 IVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGD 138
+ ++ GG H + + G+ +++G EG LG + + G+
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGE 356
Query: 139 SHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDI---GEPAVEIASGGD 195
HS A+ +GD+Y WG G G++ G E P +++ G IA G
Sbjct: 357 FHSCAVTLSGDLYTWGK-----GDFGVLGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPY 410
Query: 196 HLVVLTTSGGVFTLGCGEQGQLGRLAQRSA----SRDARQGFSALLVPARVTLRQAAARV 251
H V+T++G +FT G G G LG ++S D+ +G + V A V
Sbjct: 411 HTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 470
Query: 252 WAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAV 311
G ++ + +LF +G + G+LG ++ K PT AL + + V
Sbjct: 471 MVGSSSSS--NCSSGKLFTWGDGDKGRLGHGNKEPKLV---PTCVAALV----EPNFCQV 521
Query: 312 ALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIP-KLQNKKCISIAAGTSN 370
A G T+ L +G +Y +G YG+LG + D +T + KL IA G +
Sbjct: 522 ACGHSLTVALTTSGHVYTMGSPVYGQLG--NSHADGKTPNRVEGKLHKSFVEEIACGAYH 579
Query: 371 SFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTL 404
+T EVY+WG GS G+LG G+ +D N PTL
Sbjct: 580 VAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTL 613
Score = 78.6 bits (185), Expect = 9e-15
Identities = 94/363 (25%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQA-GGMHTIALDSSGKIWT 100
K+G + G+ G+LG G D + K + AL +++ A G H+ A+ SG ++T
Sbjct: 312 KQGESFSWGEESEGRLGHGVDS-NIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYT 370
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXX---GDSHSAALLQNGDVYAWGSFR 157
+G D G LG NE PK+ G H+A + G ++ +G
Sbjct: 371 WGKGDFGVLGHG--NEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGD-- 426
Query: 158 DSHGSMGLVVRGREGKPCKEPVKIDI--GEPAVEIASGGDHL--VVLTTSGGVFTLGCGE 213
G+ G++ G + K P ++D G V A G H VV G + C
Sbjct: 427 ---GTFGVLGHG-DKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 482
Query: 214 QGQLGRLAQRSASRDARQGFSALLVPARVT--LRQAAARVWAGHHATFVLDAQHARLFAF 271
G+L R LVP V + +V GH T L ++
Sbjct: 483 -GKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTS-GHVYTM 540
Query: 272 GLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALG 331
G YGQLG + KT + E ++ ++ +A G +H L + ++Y G
Sbjct: 541 GSPVYGQLGNSHADGKTP--NRVEGKLHKSFVEE-----IACGAYHVAVLTSRTEVYTWG 593
Query: 332 RCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKL 391
+ GRLG GD D + L+ L++K+ SIA GT+ + AV ++ W G + +
Sbjct: 594 KGSNGRLGHGDVD-DRNSPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASGMDQSM 648
Query: 392 GTG 394
+G
Sbjct: 649 CSG 651
Score = 64.5 bits (150), Expect = 2e-10
Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 30/262 (11%)
Query: 190 IASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAA 249
IA GG H V++T G F+ G +G+LG + + L+ A T
Sbjct: 300 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPK-------LIDALNTTNIELV 352
Query: 250 RVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWS 309
H L L+ +G G G+ G + + + P + L + H S
Sbjct: 353 ACGEFHSCAVTLSGD---LYTWGK---GDFGVLGHGNEVSHWVPKRVNFL--LEGIHV-S 403
Query: 310 AVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTS 369
++A G +HT + + GQ++ G +G LG GDK E + L+ + + A G
Sbjct: 404 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-VDSLKGLRTVRAACGVW 462
Query: 370 NSFAVTD------------SGEVYSWGMGSEGKLGTGESEDLNEPT-LAAVDSRAPLRVS 416
++ AV + SG++++WG G +G+LG G E PT +AA+ +V+
Sbjct: 463 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVA 522
Query: 417 AGGQHTVLLVEETSSQREPSPI 438
G TV L SP+
Sbjct: 523 CGHSLTVALTTSGHVYTMGSPV 544
Score = 43.2 bits (97), Expect = 4e-04
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 336 GRLGLGDK----SGDAETLELIPKLQNKKCI----SIAAGTSNSFAVTDSGEVYSWGMGS 387
G LG G++ S D + L+PK + +IA G ++ VT GE +SWG S
Sbjct: 264 GVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEES 323
Query: 388 EGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQ 420
EG+LG G ++ +P L + + + A G+
Sbjct: 324 EGRLGHGVDSNIQQPKLIDALNTTNIELVACGE 356
>At5g42140.1 68418.m05130 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1073
Score = 113 bits (272), Expect = 3e-25
Identities = 94/379 (24%), Positives = 159/379 (41%), Gaps = 21/379 (5%)
Query: 53 DVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRA 112
++G LG DV+ + L + + G H + G+++T+G G LG
Sbjct: 250 NIGYLGSRSDVLIPKPLESNVVLD--VHHIACGVKHAALVSRQGEVFTWGEASGGRLGHG 307
Query: 113 TSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREG 172
+ + G+ H+ A+ G++Y WG + G +G
Sbjct: 308 MGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHW 367
Query: 173 KPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSA----SRD 228
P + ++ G ++ G H ++T++G +FT G G G LG + + +
Sbjct: 368 IPKRISGPLE-GLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVE 426
Query: 229 ARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKT 288
+ G + V V A V H ++ V +LF +G + +LG G+K
Sbjct: 427 SLSGLRTIAVACGVWHAAAIVEVIVTHSSSSV---SSGKLFTWGDGDKSRLG-HGDKEPR 482
Query: 289 ALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAE 348
PT AL DH + VA G T+ L +G++Y +G YG+LG + + D +
Sbjct: 483 --LKPTCVSALI----DHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG--NPNADGK 534
Query: 349 TLELIPKLQNKKCIS-IAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLA-A 406
L+ K C+ IA G + +T EV++WG G+ G+LG G+ ED PTL A
Sbjct: 535 LPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDA 594
Query: 407 VDSRAPLRVSAGGQHTVLL 425
+ R ++ G T +
Sbjct: 595 LKERHVKNIACGSNFTAAI 613
Score = 48.0 bits (109), Expect = 1e-05
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVD-VQAGGMHTIALDSSGKIWTFG 102
G++ T G GD +LG G D K V+AL D V G T+ L +SGK++T G
Sbjct: 461 GKLFTWGDGDKSRLGHG-DKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMG 519
Query: 103 CNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGS 162
G LG ++ K + G H A L +V+ WG + ++G
Sbjct: 520 STVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWG--KGANGR 577
Query: 163 MG 164
+G
Sbjct: 578 LG 579
>At5g48330.1 68418.m05970 regulator of chromosome condensation
(RCC1) family protein contains Pfam PF00415:Regulator of
chromosome condensation (RCC1) domain (5 copies);
similar to UVB-resistance protein UVR8 (GI:5478530)
{Arabidopsis thaliana)
Length = 455
Score = 108 bits (259), Expect = 1e-23
Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 54/414 (13%)
Query: 30 GAIQLEIPTAPKKRGRVLTCGQGDVGQLGLGEDVV-----ETTKFKYVTALGDKIVDVQA 84
G ++ + + +R V++ G G++G LGL + + + V+ L I + A
Sbjct: 30 GVVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISA 89
Query: 85 GGMHTIALDSSGKIWTFGCNDEGALGRAT--SNEKDEGTPKQXXXXXXXXXXXXGDSH-- 140
G H++A+ SSG+IW +G NDEG LGR S+ PK+ S
Sbjct: 90 GHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVV 149
Query: 141 SAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKID--IGEPAVEIASGGDHLV 198
SAA+ +G ++ WG R G +GL G + P +++ E V+++ G H +
Sbjct: 150 SAAIGDDGSLWVWG--RSKRGQLGL---GNGIIEARVPSRVENLAAEHVVKVSLGWGHAL 204
Query: 199 VLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAA-RVWAGHHA 257
LT G VF G G++G + +P +L + GHHA
Sbjct: 205 ALTVDGKVFGWGYVADGRVGNVG----------------LPLEASLLDSITDGSMKGHHA 248
Query: 258 TFVLDAQHA-RLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQH 316
L+ + A + ++ + I E L T C+ V D +A G
Sbjct: 249 AGDLNLEAAEKKVVEAMSKENDMPIAWE---PCLVEET-CN--EKVAD------IACGSD 296
Query: 317 HTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTD 376
H+L L +G + + G YG+LG + L + P + ISIAAG +S A+ +
Sbjct: 297 HSLILCHDGTLLSAGSNIYGQLG-----RSKQDLGMKPVDITESPISIAAGLGHSLAICN 351
Query: 377 SGE--VYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEE 428
GE + SWG +LG G+ E+L + D +P VSAG H++ + E+
Sbjct: 352 RGERNILSWGWNRSRQLGRGKPENLPR-EVEGFDGESPASVSAGRVHSLCVTEK 404
Score = 78.2 bits (184), Expect = 1e-14
Identities = 96/393 (24%), Positives = 159/393 (40%), Gaps = 46/393 (11%)
Query: 44 GRVLTCGQGDVGQLG-LGEDVVETTKFKYVTALGDKIVDVQAG---GMHTIALDSSGKIW 99
G + G+ D GQLG + D ++ + G + V+VQA G+ + A+ G +W
Sbjct: 101 GEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLW 160
Query: 100 TFGCNDEGALGRATSN-EKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRD 158
+G + G LG E + + G H+ AL +G V+ WG D
Sbjct: 161 VWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVAD 220
Query: 159 SH-GSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQL 217
G++GL P++ + + + + G H + G L E+ +
Sbjct: 221 GRVGNVGL------------PLEASLLDSITDGSMKGHH------AAGDLNLEAAEKKVV 262
Query: 218 GRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYG 277
+++ + D + LV T + A + G + +L L + G N YG
Sbjct: 263 EAMSKEN---DMPIAWEPCLVEE--TCNEKVADIACGSDHSLIL-CHDGTLLSAGSNIYG 316
Query: 278 QLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQ--IYALGRCEY 335
QLG + K L ++ V + ++A G H+L + G+ I + G
Sbjct: 317 QLG----RSKQDL-------GMKPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRS 365
Query: 336 GRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGE 395
+LG G +E + S++AG +S VT+ GE + WG G G+LG G
Sbjct: 366 RQLGRGKPENLPREVE---GFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGS 422
Query: 396 SEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEE 428
S D EP L L+ AG H+++LV E
Sbjct: 423 SSDEPEPMLLEDVEGCVLQAVAGFDHSLILVAE 455
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 108 bits (259), Expect = 1e-23
Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 21/353 (5%)
Query: 81 DVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSH 140
++ G H + + G+I+++G G LG + + GD H
Sbjct: 291 NIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFH 350
Query: 141 SAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKI--DI-GEPAVEIASGGDHL 197
+ A+ Q+GD+Y+WG D ++ L+ G E C P ++ D+ G ++A G H
Sbjct: 351 TCAITQSGDLYSWG---DGTHNVDLLGHGNESS-CWIPKRVTGDLQGLYVSDVACGPWHT 406
Query: 198 VVLTTSGGVFTLGCGEQGQLGRLAQRSAS--RDARQGFSALLVPARVTLRQAAARVWAGH 255
V+ +SG +FT G G G LG +RS S R+ ++ + AA V +
Sbjct: 407 AVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTN 466
Query: 256 HATFV-LDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALG 314
A+ +D+ ++F +G GQLG G+ L EC + ++ +++ VA G
Sbjct: 467 EASEAEVDSSRGQVFTWGDGEKGQLG-HGDNDTKLL---PEC--VISLTNENICQ-VACG 519
Query: 315 QHHTLTLAANGQIYALGRCEYGRLGLGDKSGD-AETLELIPKLQNKKCISIAAGTSNSFA 373
T++ + G +Y +G YG+LG G+ E +E + IA G+ +
Sbjct: 520 HSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVE--GDIVEASVEEIACGSYHVAV 577
Query: 374 VTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAA-VDSRAPLRVSAGGQHTVLL 425
+T E+Y+WG G G+LG G E+ EP + + + ++ G T ++
Sbjct: 578 LTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 630
Score = 72.9 bits (171), Expect = 4e-13
Identities = 93/369 (25%), Positives = 151/369 (40%), Gaps = 42/369 (11%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWT 100
K+G + + G+G G+LG G + + K K+++++ G + G HT A+ SG +++
Sbjct: 304 KQGEIFSWGEGKGGKLGHGLE-TDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYS 362
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXX---XXXXXXXXXXGDSHSAALLQNGDVYAWGSFR 157
+G NE PK+ G H+A + +G ++ +G
Sbjct: 363 WGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGD-- 420
Query: 158 DSHGSMGLVVRGREGKPCKEP-------VKIDIG----EPAVEIASGGDHLVVLTTSGGV 206
+ G++G R P + K+ G VE+ + V ++ G V
Sbjct: 421 GTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQV 480
Query: 207 FTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTL-RQAAARVWAGHHATFVLDAQH 265
FT G GE+GQLG D + LL ++L + +V GH T V
Sbjct: 481 FTWGDGEKGQLGH-----GDNDTK-----LLPECVISLTNENICQVACGHSLT-VSRTSR 529
Query: 266 ARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANG 325
++ G YGQLG K E D + A ++ +A G +H L +
Sbjct: 530 GHVYTMGSTAYGQLG--NPTAKGNFPERVEGDIVEASVEE-----IACGSYHVAVLTSKS 582
Query: 326 QIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGM 385
+IY G+ G+LG G+ E ++ L+ K+ +I G SN AV V+ W
Sbjct: 583 EIYTWGKGLNGQLGHGNVENKREP-AVVGFLREKQVKAITCG-SNFTAVIC---VHKWVP 637
Query: 386 GSEGKLGTG 394
GSE L G
Sbjct: 638 GSEHSLCAG 646
Score = 57.6 bits (133), Expect = 2e-08
Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 33/267 (12%)
Query: 148 GDVYAWG-SFRDS--HGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSG 204
GDV+ WG S D G+ + E + ++ I A IA G H V++T G
Sbjct: 247 GDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQG 306
Query: 205 GVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQ 264
+F+ G G+ G+LG + A + + R ++ A G T + Q
Sbjct: 307 EIFSWGEGKGGKLGHGLETDAQK------PKFISSVRGLGFKSLA---CGDFHTCAI-TQ 356
Query: 265 HARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAW--SAVALGQHHTLTLA 322
L+++G + + + G +++ + P R GD S VA G HT +A
Sbjct: 357 SGDLYSWGDGTH-NVDLLGHGNESSCWIPK-----RVTGDLQGLYVSDVACGPWHTAVVA 410
Query: 323 ANGQIYALGRCEYGRLGLGDK---SGDAETLELIPKLQNK-KC--------ISIAAGTSN 370
++GQ++ G +G LG GD+ S E LI + K C + + S
Sbjct: 411 SSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASE 470
Query: 371 SFAVTDSGEVYSWGMGSEGKLGTGESE 397
+ + G+V++WG G +G+LG G+++
Sbjct: 471 AEVDSSRGQVFTWGDGEKGQLGHGDND 497
Score = 44.8 bits (101), Expect = 1e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 339 GLGDKSGDAETLELIPKLQNKKCI----SIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTG 394
G G+ L+PK + +IA G ++ VT GE++SWG G GKLG G
Sbjct: 263 GTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHG 322
Query: 395 ESEDLNEPT-LAAVDSRAPLRVSAGGQHTVLLVE 427
D +P +++V ++ G HT + +
Sbjct: 323 LETDAQKPKFISSVRGLGFKSLACGDFHTCAITQ 356
>At5g60870.1 68418.m07636 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 445
Score = 101 bits (242), Expect = 1e-21
Identities = 103/359 (28%), Positives = 151/359 (42%), Gaps = 27/359 (7%)
Query: 80 VDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDS 139
+ + G H+ L G +W +G D G LG N G
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGL 162
Query: 140 HSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVV 199
HS AL GDV+ WG G++G V RE P + D A IA+ G H
Sbjct: 163 HSVALTHQGDVFTWGY--GGFGALGHKVYTRELVPRRVDDSWDCKISA--IATSGTHTAA 218
Query: 200 LTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARV-TLRQAAARVWAGHHAT 258
+T SG ++ G E+G GRL R +G L VP++V L A V G T
Sbjct: 219 ITESGELYMWG-REEGD-GRLGL-GPGRGPNEG-GGLSVPSKVKALTVPVASVSCGGFFT 274
Query: 259 FVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHT 318
L + +L+ +G N+ +LG G+ + P +L V + +A G +H+
Sbjct: 275 MAL-TKEGQLWNWGANSNYELG-RGDN--LGGWEPMPVPSLEGV----RITQIACGGYHS 326
Query: 319 LTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSG 378
L L G++ + G +G+LG E I L +KK + IA+G S+S A+TD G
Sbjct: 327 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTE-IEALADKKIVFIASGGSSSAAITDGG 385
Query: 379 EVYSWGMGSEGKLGT-GESEDLNEPT----LAAVDSRAP---LRVSAGGQHTVLLVEET 429
E++ WG + +LG G E P L D P + +S G H + LV +
Sbjct: 386 ELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 444
Score = 76.6 bits (180), Expect = 4e-14
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 21/294 (7%)
Query: 50 GQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGAL 109
G+GD G+LG G++ I + GG+H++AL G ++T+G GAL
Sbjct: 125 GKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGAL 184
Query: 110 GRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGL-VVR 168
G + +H+AA+ ++G++Y WG + G +GL R
Sbjct: 185 GHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGR-EEGDGRLGLGPGR 243
Query: 169 G-REGKPCKEPVKID-IGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSAS 226
G EG P K+ + P ++ GG + LT G ++ G +LGR
Sbjct: 244 GPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGR------- 296
Query: 227 RDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKR 286
D G+ + VP+ +R ++ G + + L + ++ ++G +GQLG + +
Sbjct: 297 GDNLGGWEPMPVPSLEGVR--ITQIACGGYHSLAL-TEEGKVLSWGHGGHGQLGSSSLRN 353
Query: 287 KTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGL 340
+ PTE +AL D +A G + + G+++ G + +LG+
Sbjct: 354 QKV---PTEIEALA----DKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV 400
Score = 57.6 bits (133), Expect = 2e-08
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 10/188 (5%)
Query: 43 RGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFG 102
+G V T G G G LG E + + KI + G HT A+ SG+++ +G
Sbjct: 170 QGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWG 229
Query: 103 CND-EGALGRATSNEKDEG-----TPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSF 156
+ +G LG +EG K G + AL + G ++ WG+
Sbjct: 230 REEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGAN 289
Query: 157 RDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQ 216
+ G + G E P + I +IA GG H + LT G V + G G GQ
Sbjct: 290 SNYELGRGDNLGGWEPMPVPSLEGVRI----TQIACGGYHSLALTEEGKVLSWGHGGHGQ 345
Query: 217 LGRLAQRS 224
LG + R+
Sbjct: 346 LGSSSLRN 353
Score = 55.6 bits (128), Expect = 7e-08
Identities = 29/117 (24%), Positives = 53/117 (45%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTF 101
K G++ G +LG G+++ + G +I + GG H++AL GK+ ++
Sbjct: 279 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 338
Query: 102 GCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRD 158
G G LG ++ + T + G S SAA+ G+++ WG+ +D
Sbjct: 339 GHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKD 395
>At5g08710.1 68418.m01035 regulator of chromosome condensation
(RCC1) family protein / UVB-resistance protein-related
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to UVB-resistance protein
UVR8 (GI:10177674) {Arabidopsis thaliana}
Length = 434
Score = 101 bits (242), Expect = 1e-21
Identities = 100/396 (25%), Positives = 164/396 (41%), Gaps = 36/396 (9%)
Query: 50 GQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIALDSSGKIWTFGCNDEGA 108
G GD G+LGLG + T +AL D I V GG HT+ L + +++ G ND G
Sbjct: 55 GSGDYGRLGLGNLDSQWTP-AVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQ 113
Query: 109 LGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVR 168
LG + + G HSAA+ +G++Y WG ++S G +GL
Sbjct: 114 LGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWG--KNSSGQLGL--G 169
Query: 169 GREGKPCKEPVKIDI--GEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSAS 226
+ + + P K++ G +A G +H V +T G V + G G G+LG Q S
Sbjct: 170 KKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLF 229
Query: 227 RDARQG--FSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGE 284
R F+ L+ ++ V AG + D ++ F FG + ++G G
Sbjct: 230 GILRSNSEFTPRLIKELEGIK--VTNVAAGLLHSACTD-ENGSAFMFGEKSINKMGFGGV 286
Query: 285 KRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKS 344
+ T +P+ + + VA G +HT + G++Y G E G LG
Sbjct: 287 RNAT---TPS------IISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTY 337
Query: 345 GDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMG------------SEGKLG 392
+ + ++ G ++ A++D+ V++WG G S G+LG
Sbjct: 338 VSHSPVRVEGPFLESTVSQVSCGWKHTAAISDN-NVFTWGWGGSHGTFSVDGHSSGGQLG 396
Query: 393 TGESEDLNEPTLAAVDSRA-PLRVSAGGQHTVLLVE 427
G D P + + + +S G HT ++E
Sbjct: 397 HGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLE 432
Score = 82.2 bits (194), Expect = 7e-16
Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 34/284 (11%)
Query: 153 WGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCG 212
WGS +G +GL + P D AV A GG H + LT + VF G
Sbjct: 54 WGS--GDYGRLGLGNLDSQWTPAVCSALSDHSITAV--ACGGAHTLFLTETRRVFATGLN 109
Query: 213 EQGQLGRLAQRSASRDARQGFSALLVPARVT-LRQAAARVWAG--HHATFVLDAQHARLF 269
+ GQLG +S + D P V+ L + + AG H A +D + L+
Sbjct: 110 DCGQLGVSDVKSHAMD----------PLEVSGLDKDILHISAGYYHSAAITVDGE---LY 156
Query: 270 AFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYA 329
+G N+ GQLG+ G+K + PT+ +AL + +VALG H++ + G++ +
Sbjct: 157 MWGKNSSGQLGL-GKKAARVVRVPTKVEALHGI----TIQSVALGSEHSVAVTDGGEVLS 211
Query: 330 LGRCEYGRLGLGDKSG-------DAE-TLELIPKLQNKKCISIAAGTSNSFAVTDSGEVY 381
G GRLG G +S ++E T LI +L+ K ++AAG +S ++G +
Sbjct: 212 WGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAF 271
Query: 382 SWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLL 425
+G S K+G G + P++ + A V+ GG HT ++
Sbjct: 272 MFGEKSINKMGFGGVRNATTPSIISEVPYAE-EVACGGYHTCVV 314
Score = 74.9 bits (176), Expect = 1e-13
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 271 FGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYAL 330
+G +YG+LG+ + ++P C AL DH+ +AVA G HTL L +++A
Sbjct: 54 WGSGDYGRLGLGNLDSQ---WTPAVCSAL----SDHSITAVACGGAHTLFLTETRRVFAT 106
Query: 331 GRCEYGRLGLGD-KSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEG 389
G + G+LG+ D KS + LE+ +K + I+AG +S A+T GE+Y WG S G
Sbjct: 107 GLNDCGQLGVSDVKSHAMDPLEV--SGLDKDILHISAGYYHSAAITVDGELYMWGKNSSG 164
Query: 390 KLGTGE--SEDLNEPT-LAAVDSRAPLRVSAGGQHTVLLVE 427
+LG G+ + + PT + A+ V+ G +H+V + +
Sbjct: 165 QLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD 205
Score = 56.4 bits (130), Expect = 4e-08
Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 31/335 (9%)
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSH 160
+G D G LG + + G +H+ L + V+A G +
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGL--NDC 111
Query: 161 GSMGLVVRGREGKPCKEPVKID-IGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGR 219
G +G+ +P+++ + + + I++G H +T G ++ G GQLG
Sbjct: 112 GQLGV---SDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLG- 167
Query: 220 LAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQL 279
+ A+R R + +T++ A H+ V D + ++G G+L
Sbjct: 168 -LGKKAARVVRVPTKVEALHG-ITIQSVAL---GSEHSVAVTDG--GEVLSWGGGGSGRL 220
Query: 280 G------ITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRC 333
G + G R + F+P L + + VA G H+ NG + G
Sbjct: 221 GHGHQSSLFGILRSNSEFTPRLIKELEGIKVTN----VAAGLLHSACTDENGSAFMFGEK 276
Query: 334 EYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGT 393
++G G +A T +I ++ + +A G ++ VT GE+Y+WG G LGT
Sbjct: 277 SINKMGFGGVR-NATTPSIISEVPYAE--EVACGGYHTCVVTRGGELYTWGSNENGCLGT 333
Query: 394 GESEDLNEPTLAA---VDSRAPLRVSAGGQHTVLL 425
+ + P ++S +VS G +HT +
Sbjct: 334 DSTYVSHSPVRVEGPFLESTVS-QVSCGWKHTAAI 367
Score = 54.0 bits (124), Expect = 2e-07
Identities = 51/186 (27%), Positives = 74/186 (39%), Gaps = 17/186 (9%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKY-VTAL-GDKIVDVQAGGMHTIALDSSGKIWTF 101
G + G+ GQLGLG+ + V AL G I V G H++A+ G++ ++
Sbjct: 153 GELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSW 212
Query: 102 GCNDEGALGRATSNE-------KDEGTPK--QXXXXXXXXXXXXGDSHSAALLQNGDVYA 152
G G LG + E TP+ + G HSA +NG +
Sbjct: 213 GGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFM 272
Query: 153 WGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCG 212
+G + G V + P I A E+A GG H V+T G ++T G
Sbjct: 273 FGEKSINKMGFGGV------RNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSN 326
Query: 213 EQGQLG 218
E G LG
Sbjct: 327 ENGCLG 332
Score = 44.0 bits (99), Expect = 2e-04
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTF 101
+ G G+ + ++G G V T ++ + +V GG HT + G+++T+
Sbjct: 266 ENGSAFMFGEKSINKMGFG-GVRNATTPSIISEV-PYAEEVACGGYHTCVVTRGGELYTW 323
Query: 102 GCNDEGALGR-ATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAW------G 154
G N+ G LG +T + G H+AA+ N +V+ W G
Sbjct: 324 GSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDN-NVFTWGWGGSHG 382
Query: 155 SFR-DSHGSMGLVVRGREGKPCKEPVKIDIGE--PAVEIASGGDH 196
+F D H S G + G + + P +D+G+ AV I+ G +H
Sbjct: 383 TFSVDGHSSGGQLGHGSDVDYAR-PAMVDLGKNVRAVHISCGFNH 426
Score = 34.7 bits (76), Expect = 0.15
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 375 TDSGEVYS--WGMGSEGKLGTGESEDLNEPTL-AAVDSRAPLRVSAGGQHTVLLVE 427
++SG+ ++ WG G G+LG G + P + +A+ + V+ GG HT+ L E
Sbjct: 44 SESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTE 99
>At1g65920.1 68414.m07480 regulator of chromosome condensation
(RCC1) family protein / zinc finger protein-related
contains Pfam profiles: regulator of chromosome
condensation (RCC1), PF01363 FYVE zinc finger
Length = 1006
Score = 98.3 bits (234), Expect = 1e-20
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 15/328 (4%)
Query: 79 IVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGD 138
+ + G H + G+++ +G + G LG + + D + D
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 353
Query: 139 SHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLV 198
+ A+ ++G++Y WG + G R K + + +A G H
Sbjct: 354 HQTCAVTESGELYLWGIDGGTIEQSGSQFLTR-----KISDVLGGSLTVLSVACGAWHTA 408
Query: 199 VLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLR--QAAARVWAGHH 256
++T+SG +FT G G G LG + S ++ + V+ AA V +
Sbjct: 409 IVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETAND 468
Query: 257 ATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQH 316
F +LF +G + G+LG KRK TE DH + V+ G
Sbjct: 469 RKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELI-------DHDFIKVSCGWT 521
Query: 317 HTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTD 376
T+ L+ +G +Y +G +G+LG ++ D ++ L + IA+G+ + +T
Sbjct: 522 LTVALSISGTVYTMGSSIHGQLGC-PRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTS 580
Query: 377 SGEVYSWGMGSEGKLGTGESEDLNEPTL 404
G VY+WG G G+LG G+ D N P L
Sbjct: 581 FGNVYTWGKGMNGQLGLGDVRDRNSPVL 608
Score = 66.5 bits (155), Expect = 4e-11
Identities = 86/344 (25%), Positives = 144/344 (41%), Gaps = 33/344 (9%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIV-DVQAGGMHTIALDSSGKIWT 100
++G V G G+ G+LGL + ++ K V +L D V V T A+ SG+++
Sbjct: 309 RQGEVFCWGNGNSGKLGLKVN-IDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYL 367
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRD-- 158
+G D G + ++ S G H+A + +G ++ +GS
Sbjct: 368 WGI-DGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGV 426
Query: 159 -SHGSMGLVVRGREGKPCKEPVKIDIG----EPAVEIASGGDHLVVLTTS-GGVFTLGCG 212
HGS+ V + +E + + I + A + + D S G +FT G G
Sbjct: 427 LGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDG 486
Query: 213 EQGQLGRLAQRSASRDARQGFSALLVPARVT--LRQAAARVWAGHHATFVLDAQHARLFA 270
++G+LG D+++ LVP VT + +V G T L ++
Sbjct: 487 DKGRLGH-------ADSKR----KLVPTCVTELIDHDFIKVSCGWTLTVALSIS-GTVYT 534
Query: 271 FGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYAL 330
G + +GQLG K K+ + + R D +A G HH L + G +Y
Sbjct: 535 MGSSIHGQLGCPRAKDKSV--NVVLGNLTRQFVKD-----IASGSHHVAVLTSFGNVYTW 587
Query: 331 GRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAV 374
G+ G+LGLGD D + L+ L ++ SIA G + + A+
Sbjct: 588 GKGMNGQLGLGDVR-DRNSPVLVEPLGDRLVESIACGLNLTAAI 630
Score = 60.1 bits (139), Expect = 3e-09
Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 29/324 (8%)
Query: 113 TSNEKDEGTPK--QXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGR 170
+ N+ D +PK + G H+A + + G+V+ WG+ + G +GL V
Sbjct: 274 SKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGN--GNSGKLGLKVNID 331
Query: 171 EGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDAR 230
P + D+ AV + DH T G L G G ++S S+
Sbjct: 332 IDHPKRVESLEDV---AVRSVACSDHQTCAVTESGELYLW----GIDGGTIEQSGSQFLT 384
Query: 231 QGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTAL 290
+ S +L +T+ A W H V + +LF +G G G+ G ++
Sbjct: 385 RKISDVL-GGSLTVLSVACGAW---HTAIVTSS--GQLFTYGS---GTFGVLGHGSLESV 435
Query: 291 FSPTECDALRAV-------GDDHAWSAVALGQHHTLTLAAN-GQIYALGRCEYGRLGLGD 342
P E ++LR + G H + V A + G+++ G + GRLG D
Sbjct: 436 TKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHAD 495
Query: 343 KSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEP 402
+ +L + I ++ G + + A++ SG VY+ G G+LG ++D +
Sbjct: 496 SKRKLVPT-CVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVN 554
Query: 403 TLAAVDSRAPLRVSAGGQHTVLLV 426
+ +R ++ A G H V ++
Sbjct: 555 VVLGNLTRQFVKDIASGSHHVAVL 578
Score = 58.8 bits (136), Expect = 8e-09
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 3/140 (2%)
Query: 41 KKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWT 100
K G++ T G GD G+LG + + + + V G T+AL SG ++T
Sbjct: 475 KSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYT 534
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSH 160
G + G LG + +K G H A L G+VY WG + +
Sbjct: 535 MGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWG--KGMN 592
Query: 161 GSMGL-VVRGREGKPCKEPV 179
G +GL VR R EP+
Sbjct: 593 GQLGLGDVRDRNSPVLVEPL 612
Score = 41.5 bits (93), Expect = 0.001
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 363 SIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHT 422
SI+ G ++ VT GEV+ WG G+ GKLG + D++ P +R A H
Sbjct: 296 SISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQ 355
Query: 423 VLLVEET 429
V E+
Sbjct: 356 TCAVTES 362
>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
class), putative similar to zinc finger protein
(GI:15811367) [Arabidopsis thaliana]; similar to
TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar
to disease resistance protein RPP1-WsB (GI:3860165)
[Arabidopsis thaliana]
Length = 1996
Score = 95.9 bits (228), Expect = 6e-20
Identities = 90/354 (25%), Positives = 150/354 (42%), Gaps = 28/354 (7%)
Query: 80 VDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDS 139
+D+ G H + G+++T+ G LG + + G+
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEY 1264
Query: 140 HSAALLQNGDVYAWGSFRDSHGSMGLVVRGRE-----GKPCKEPVKIDIGEPAVEIASGG 194
H+ A+ +GD++ WG D ++GL+ G + K PV+ G + +A G
Sbjct: 1265 HTCAVSTSGDLFTWG---DGIHNVGLLGHGSDLSHWIPKRVSGPVE---GLQVLSVACGT 1318
Query: 195 DHLVVLTTSGGVFTLGCGEQGQLGRLAQRSAS--RDARQ--GFSALLVPARVTLRQAAAR 250
H + T +G +FT G G G LG + S S ++ + G L V V A
Sbjct: 1319 WHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVE 1378
Query: 251 VWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSA 310
V T +LF +G + +LG G K L PT +L D+ ++
Sbjct: 1379 VM-NQTGT---STSSRKLFTWGDGDKNRLG-HGNKETYLL--PTCVSSLI----DYNFNQ 1427
Query: 311 VALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSN 370
+A G T+ L +G ++ +G +G+LG + G L + +L + I+ G +
Sbjct: 1428 IACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCL-VQDRLVGEFVEEISCGDHH 1486
Query: 371 SFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLA-AVDSRAPLRVSAGGQHTV 423
+T EV++WG GS G+LG G+ +D PTL A+ R +S G +V
Sbjct: 1487 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGADQSV 1540
Score = 53.2 bits (122), Expect = 4e-07
Identities = 74/268 (27%), Positives = 114/268 (42%), Gaps = 26/268 (9%)
Query: 44 GRVLTCGQG--DVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWT 100
G + T G G +VG LG G D+ + + G +++ V G H+ ++GK++T
Sbjct: 1273 GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFT 1332
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSH 160
FG G LG + G H+ A+++ + +
Sbjct: 1333 FGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKL 1392
Query: 161 GSMGLVVRGREGKPCKE----PVKID--IGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQ 214
+ G + R G KE P + I +IA G V LTTSG VFT+G
Sbjct: 1393 FTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSH 1452
Query: 215 GQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLN 274
GQLG S++ D G LV R+ + + + G H VL ++ + +F +G
Sbjct: 1453 GQLG-----SSNSD---GKLPCLVQDRL-VGEFVEEISCGDHHVAVLTSR-SEVFTWGKG 1502
Query: 275 NYGQLGITGEK--RKTALFSPTECDALR 300
+ G+LG G+K RKT PT +ALR
Sbjct: 1503 SNGRLG-HGDKDDRKT----PTLVEALR 1525
>At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator of
chromosome condensation (RCC1) family protein identical
to zinc finger protein PRAF1 [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.
Length = 1103
Score = 95.9 bits (228), Expect = 6e-20
Identities = 88/352 (25%), Positives = 147/352 (41%), Gaps = 21/352 (5%)
Query: 82 VQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPK---QXXXXXXXXXXXXGD 138
+ G H + G+I+T+G G LG KD P+ G+
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIG--KDVFHPRLVESLTATSSVDFVACGE 343
Query: 139 SHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLV 198
H+ A+ G++Y WG + G +G P + ++ G ++ G H
Sbjct: 344 FHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLE-GLHVASVSCGPWHTA 402
Query: 199 VLTTSGGVFTLGCGEQGQLGR----LAQRSASRDARQGFSALLVPARVTLRQAAARVWAG 254
++T+ G +FT G G G LG Q ++ G + V V A +
Sbjct: 403 LITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVT 462
Query: 255 HHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALG 314
+ + + +LF +G + +LG G+K PT AL D+ + +A G
Sbjct: 463 QSNSSSVSS--GKLFTWGDGDKNRLG-HGDKDPR--LKPTCVPALI----DYNFHKIACG 513
Query: 315 QHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAV 374
T+ L +GQ++ +G YG+LG G L + KL ++ I+ G + A+
Sbjct: 514 HSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCL-VEDKLASEFVEEISCGAYHVAAL 572
Query: 375 TDSGEVYSWGMGSEGKLGTGESEDLNEPTLA-AVDSRAPLRVSAGGQHTVLL 425
T EVY+WG G+ G+LG G+ ED PT+ A+ R ++ G +T +
Sbjct: 573 TSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 58.4 bits (135), Expect = 1e-08
Identities = 55/192 (28%), Positives = 77/192 (40%), Gaps = 19/192 (9%)
Query: 44 GRVLTCGQG--DVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWT 100
G + T G G +VG LG G D+ + +L G + V G HT + S G+++T
Sbjct: 353 GELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFT 412
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQ------------NG 148
FG G LG + G H+AA+++ +G
Sbjct: 413 FGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSG 472
Query: 149 DVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFT 208
++ WG +G + KP P ID +IA G V LTTSG VFT
Sbjct: 473 KLFTWGD--GDKNRLGHGDKDPRLKPTCVPALIDYN--FHKIACGHSLTVGLTTSGQVFT 528
Query: 209 LGCGEQGQLGRL 220
+G GQLG L
Sbjct: 529 MGSTVYGQLGNL 540
Score = 54.4 bits (125), Expect = 2e-07
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 32/274 (11%)
Query: 148 GDVYAWGS-FRDSHGSMGL-----VVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLT 201
GDVY WG D+ +G+ + R +P++ +I +IA G H +T
Sbjct: 238 GDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVT 297
Query: 202 TSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVL 261
G +FT G G+LG +D F LV + +T + V G T +
Sbjct: 298 RQGEIFTWGEESGGRLG----HGIGKDV---FHPRLVES-LTATSSVDFVACGEFHTCAV 349
Query: 262 DAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTL 321
L+ +G + +G+ G + + P ++ H ++V+ G HT +
Sbjct: 350 TLA-GELYTWGDGTH-NVGLLGHGSDISHWIPKRIAG--SLEGLHV-ASVSCGPWHTALI 404
Query: 322 AANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTD----- 376
+ G+++ G +G LG GDK E + L + I+++ G ++ AV +
Sbjct: 405 TSYGRLFTFGDGTFGVLGHGDKETVQYPRE-VESLSGLRTIAVSCGVWHTAAVVEIIVTQ 463
Query: 377 -------SGEVYSWGMGSEGKLGTGESEDLNEPT 403
SG++++WG G + +LG G+ + +PT
Sbjct: 464 SNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPT 497
>At3g55580.1 68416.m06171 regulator of chromosome condensation
(RCC1) family protein UVB-resistance protein UVR8,
Arabidopsis thaliana, EMBL:AF130441; contains Pfam
PF00415: Regulator of chromosome condensation (RCC1)
domain
Length = 488
Score = 94.3 bits (224), Expect = 2e-19
Identities = 79/274 (28%), Positives = 119/274 (43%), Gaps = 29/274 (10%)
Query: 174 PCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLG-----RLAQR----- 223
PC V + G V +A+GG H + L+ G V+ G G +GQLG RL
Sbjct: 225 PCL--VSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIP 282
Query: 224 -----SASRDARQG--FSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNY 276
S + G S+++ RV G H+ + D L FG Y
Sbjct: 283 CIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDT--GALLTFGWGLY 340
Query: 277 GQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYG 336
GQ G + SPT +L + + VA G HT +++G +YA G ++G
Sbjct: 341 GQCGQGSTDDE---LSPTCVSSLLGIRIEE----VAAGLWHTTCASSDGDVYAFGGNQFG 393
Query: 337 RLGLG-DKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGE 395
+LG G D++ L P L+N +I+ G ++ +TD G V+ WG G+LG G+
Sbjct: 394 QLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGD 453
Query: 396 SEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEET 429
D N P + P ++ G HT+LL + T
Sbjct: 454 VIDRNAPAEVRIKDCFPKNIACGWWHTLLLGQPT 487
Score = 63.7 bits (148), Expect = 3e-10
Identities = 90/376 (23%), Positives = 147/376 (39%), Gaps = 35/376 (9%)
Query: 81 DVQAGGM-HTIALDSSGKIWTFGCNDEGALGRATSNEKDEGT-PKQXXXXXXXXXXXXGD 138
DV GG +A SGK+ T+G D+ TS + E P G
Sbjct: 67 DVSGGGCGFAMATAESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGW 126
Query: 139 SHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLV 198
+H A+ +N VY WG +R+ + G V +G C+ I V +S G
Sbjct: 127 AHCVAVTENQQVYTWG-WRECIPT-GRVFGQVDGDSCER--NISFSTEQVSSSSQGKKSS 182
Query: 199 VLTTSGGVFTLGCGEQGQLGRLA-QRSASRDARQGFSALL--VPARVTLRQAA--ARVWA 253
TS V G GE + R++ + A+ ++ Q + L +P V+L V A
Sbjct: 183 G-GTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAA 241
Query: 254 GHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSA--- 310
G T L + +++ +G GQLG+ R + P C + G +
Sbjct: 242 GGRHTLAL-SDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMS 300
Query: 311 ---------------VALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPK 355
+A G H+ + G + G YG+ G G + D + +
Sbjct: 301 SVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQG-STDDELSPTCVSS 359
Query: 356 LQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRV 415
L + +AAG ++ + G+VY++G G+LGTG + P L + + V
Sbjct: 360 LLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNV 419
Query: 416 ---SAGGQHTVLLVEE 428
S G +HT ++ +E
Sbjct: 420 KTISCGARHTAVITDE 435
Score = 53.6 bits (123), Expect = 3e-07
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G +LT G G GQ G G E + + LG +I +V AG HT S G ++ FG
Sbjct: 330 GALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGG 389
Query: 104 NDEGALGRATSNEKDEGTPK----QXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDS 159
N G LG T ++ E PK G H+A + G V+ WG +
Sbjct: 390 NQFGQLG--TGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWG--WNK 445
Query: 160 HGSMGL 165
+G +G+
Sbjct: 446 YGQLGI 451
Score = 52.8 bits (121), Expect = 5e-07
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 4/145 (2%)
Query: 75 LGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXX 134
LG + + GG H+ + +G + TFG G G+ +++++ T
Sbjct: 309 LGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEV 368
Query: 135 XXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKP-CKEPVKIDIGEPAVEIASG 193
G H+ +GDVYA+G + G +G E P E ++ I+ G
Sbjct: 369 AAGLWHTTCASSDGDVYAFGG--NQFGQLGTGCDQAETLPKLLEAPNLE-NVNVKTISCG 425
Query: 194 GDHLVVLTTSGGVFTLGCGEQGQLG 218
H V+T G VF G + GQLG
Sbjct: 426 ARHTAVITDEGRVFCWGWNKYGQLG 450
Score = 42.7 bits (96), Expect = 6e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 74 ALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALG 110
A G +IV V AGG HT+AL G++W +G EG LG
Sbjct: 231 APGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLG 267
Score = 35.9 bits (79), Expect = 0.063
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 38 TAPKKRGRVLTCGQGDVGQLGLGEDVVET-TKFKYVTALGD-KIVDVQAGGMHTIALDSS 95
T G V G GQLG G D ET K L + + + G HT +
Sbjct: 376 TCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDE 435
Query: 96 GKIWTFGCNDEGALG 110
G+++ +G N G LG
Sbjct: 436 GRVFCWGWNKYGQLG 450
Score = 32.3 bits (70), Expect = 0.78
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 286 RKTALFSPTECDALRAVGDDHAWSAVALGQ-HHTLTLAANGQIYALGRCEYGRLGLGDKS 344
+++ L SP E AV + +W V+ G + A +G++ G +
Sbjct: 45 QRSPLMSPVEVKIPPAV--ESSWKDVSGGGCGFAMATAESGKLITWGSTDDLGQSYVTSG 102
Query: 345 GDAETLELIPKLQNKKCISIA-AGTSNSFAVTDSGEVYSWG 384
ET E P L + C+ A AG ++ AVT++ +VY+WG
Sbjct: 103 KHGETPEPFP-LPPEVCVQKAEAGWAHCVAVTENQQVYTWG 142
>At3g23270.1 68416.m02933 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1); similar to
zinc finger protein (GI:15811367) [Arabidopsis
thaliana]; similar to chromosome condensation regulator
protein (GI:22770461) [Cicer arietinum]
Length = 1045
Score = 94.3 bits (224), Expect = 2e-19
Identities = 90/348 (25%), Positives = 150/348 (43%), Gaps = 22/348 (6%)
Query: 82 VQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHS 141
+ G H + G+++T+G G LG + + G+ H+
Sbjct: 256 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315
Query: 142 AALLQNGDVYAWGSFRDSHGSMGLVVRGREGK---PCKEPVKIDIGEPAVEIASGGDHLV 198
+ +GD+++WG D ++GL+ G + P + ++ G + +A G H
Sbjct: 316 CVVSTSGDLFSWG---DGIHNVGLLGHGSDISHWIPKRVSGPLE-GLQVLSVACGTWHSA 371
Query: 199 VLTTSGGVFTLGCGEQGQLGRLAQRSASRDAR-QGFSAL-LVPARVTLRQAAARVWA-GH 255
+ T +G +FT G G G LG + S S Q + L V ++ AA V G
Sbjct: 372 LATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQ 431
Query: 256 HATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQ 315
AT + +LF +G + +LG G K L PT +L D+ + +A G
Sbjct: 432 TATSM---SSRKLFTWGDGDKNRLG-HGNKETYLL--PTCVSSLI----DYNFHKIACGH 481
Query: 316 HHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVT 375
T+ L +G ++ +G +G+LG G L + +L + IA G + +T
Sbjct: 482 TFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCL-VQDRLVGEFVEEIACGAHHVAVLT 540
Query: 376 DSGEVYSWGMGSEGKLGTGESEDLNEPTLA-AVDSRAPLRVSAGGQHT 422
EV++WG G+ G+LG G++ED PTL A+ R +S G T
Sbjct: 541 SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFT 588
Score = 52.0 bits (119), Expect = 9e-07
Identities = 68/276 (24%), Positives = 112/276 (40%), Gaps = 42/276 (15%)
Query: 148 GDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAV----------EIASGGDHL 197
GDVY WG + G++ +G E VK D+ P +I G H+
Sbjct: 211 GDVYVWGEV----WTEGILP---DGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHV 263
Query: 198 VVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHA 257
++T G VFT G G+LG Q SR F AL + V G +
Sbjct: 264 ALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLAL---TNIDF------VACGEYH 314
Query: 258 TFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHH 317
T V+ LF++G + +G+ G + + P + + +VA G H
Sbjct: 315 TCVVSTS-GDLFSWG-DGIHNVGLLGHGSDISHWIPKR---VSGPLEGLQVLSVACGTWH 369
Query: 318 TLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTD- 376
+ ANG+++ G +G LG G++ + E + L K + +A ++ A+ +
Sbjct: 370 SALATANGKLFTFGDGAFGVLGHGNRESVSYPKE-VQSLNGLKTVKVACSIWHTAAIVEV 428
Query: 377 ---------SGEVYSWGMGSEGKLGTGESEDLNEPT 403
S ++++WG G + +LG G E PT
Sbjct: 429 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPT 464
Score = 51.2 bits (117), Expect = 2e-06
Identities = 73/268 (27%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 44 GRVLTCGQG--DVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWT 100
G + + G G +VG LG G D+ + L G +++ V G H+ ++GK++T
Sbjct: 322 GDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFT 381
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDS--HSAALLQNGDVYAWGSFRD 158
FG G LG N + PK+ S H+AA+++ A
Sbjct: 382 FGDGAFGVLGH--GNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSR 439
Query: 159 SHGSMGLVVRGREGKPCKE----PVKID--IGEPAVEIASGGDHLVVLTTSGGVFTLGCG 212
+ G + R G KE P + I +IA G V LTTSG VFT+G
Sbjct: 440 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGT 499
Query: 213 EQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFG 272
GQLG G LV R+ + + + G H VL ++ + +F +G
Sbjct: 500 AHGQLG--------NSISDGKLPCLVQDRL-VGEFVEEIACGAHHVAVLTSR-SEVFTWG 549
Query: 273 LNNYGQLGITGEKRKTALFSPTECDALR 300
G+LG + K +PT +ALR
Sbjct: 550 KGANGRLGHGDTEDKR---TPTLVEALR 574
Score = 35.5 bits (78), Expect = 0.083
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 364 IAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLR-VSAGGQHT 422
I G + VT GEV++WG G+LG G D++ P L + + V+ G HT
Sbjct: 256 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315
Query: 423 VLL 425
++
Sbjct: 316 CVV 318
>At5g60870.2 68418.m07635 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 383
Score = 92.3 bits (219), Expect = 7e-19
Identities = 103/366 (28%), Positives = 151/366 (41%), Gaps = 34/366 (9%)
Query: 80 VDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDS 139
+ + G H+ L G +W +G D G LG N G
Sbjct: 35 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGL 93
Query: 140 HSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVV 199
HS AL GDV+ WG G++G V RE P + D A IA+ G H
Sbjct: 94 HSVALTHQGDVFTWGY--GGFGALGHKVYTRELVPRRVDDSWDCKISA--IATSGTHTAA 149
Query: 200 LTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARV-TLRQAAARVWAGHHAT 258
+T SG ++ G E+G GRL R +G L VP++V L A V G T
Sbjct: 150 ITESGELYMWG-REEGD-GRLGL-GPGRGPNEG-GGLSVPSKVKALTVPVASVSCGGFFT 205
Query: 259 FVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHT 318
L + +L+ +G N+ +LG G+ + P +L V + +A G +H+
Sbjct: 206 MAL-TKEGQLWNWGANSNYELG-RGDN--LGGWEPMPVPSLEGV----RITQIACGGYHS 257
Query: 319 LTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVT--- 375
L L G++ + G +G+LG E I L +KK + IA+G S+S A+T
Sbjct: 258 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTE-IEALADKKIVFIASGGSSSAAITGWD 316
Query: 376 ----DSGEVYSWGMGSEGKLGT-GESEDLNEPT----LAAVDSRAP---LRVSAGGQHTV 423
D GE++ WG + +LG G E P L D P + +S G H +
Sbjct: 317 WFLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHAL 376
Query: 424 LLVEET 429
LV +
Sbjct: 377 CLVSRS 382
Score = 73.3 bits (172), Expect = 3e-13
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 50 GQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGAL 109
G+GD G+LG G++ I + GG+H++AL G ++T+G GAL
Sbjct: 56 GKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGAL 115
Query: 110 GRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGL-VVR 168
G + +H+AA+ ++G++Y WG + G +GL R
Sbjct: 116 GHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGR-EEGDGRLGLGPGR 174
Query: 169 G-REGKPCKEPVKID-IGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSAS 226
G EG P K+ + P ++ GG + LT G ++ G +LGR
Sbjct: 175 GPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGR------- 227
Query: 227 RDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKR 286
D G+ + VP+ +R ++ G + + L + ++ ++G +GQLG + +
Sbjct: 228 GDNLGGWEPMPVPSLEGVR--ITQIACGGYHSLAL-TEEGKVLSWGHGGHGQLGSSSLRN 284
Query: 287 KTALFSPTECDAL 299
+ PTE +AL
Sbjct: 285 QKV---PTEIEAL 294
Score = 56.8 bits (131), Expect = 3e-08
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 4/130 (3%)
Query: 72 VTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXX 131
V AL + V GG T+AL G++W +G N LGR + E P
Sbjct: 188 VKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRI 247
Query: 132 XXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIA 191
G HS AL + G V +WG HG +G + P + D + V IA
Sbjct: 248 TQIACGGYHSLALTEEGKVLSWG--HGGHGQLGSSSLRNQKVPTEIEALAD--KKIVFIA 303
Query: 192 SGGDHLVVLT 201
SGG +T
Sbjct: 304 SGGSSSAAIT 313
Score = 28.7 bits (61), Expect = 9.6
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIA-------LD 93
+ G+VL+ G G GQLG + + AL D KIV + +GG + A L
Sbjct: 262 EEGKVLSWGHGGHGQLG-SSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLT 320
Query: 94 SSGKIWTFGCNDEGALG 110
G++W +G + LG
Sbjct: 321 DGGELWMWGNAKDFQLG 337
>At1g27060.1 68414.m03299 regulator of chromosome condensation
(RCC1) family protein low similiarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 386
Score = 91.9 bits (218), Expect = 9e-19
Identities = 103/371 (27%), Positives = 158/371 (42%), Gaps = 37/371 (9%)
Query: 45 RVLTCGQGDVGQLGLGEDVVETT-KFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
+V + G G GQLG + E + +T+L I + GG H IAL S GK++T+G
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSL-PSISMLACGGAHVIALTSGGKVFTWGR 74
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSM 163
G LG G SHS + +G ++ G+ GS
Sbjct: 75 GSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGN-----GSF 129
Query: 164 GLVVRGREGKPCKEPVKID-IGEPAVE-IASGGDHLVVLTTSGGVFTLGCGEQGQLGRLA 221
G + G + P K+ +V+ +A G H +VL V G G++GQLG +
Sbjct: 130 GQLGHG-DTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSS 188
Query: 222 QRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGI 281
R S + S L V + + +A H A D Q F++G G +
Sbjct: 189 DRIKSVNLPCVVSGL---KDVEVVRISAN--GDHSAAISADGQ---FFSWGRGFCGGPDV 240
Query: 282 TGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRC---EYGRL 338
+ +L SP ++ VA+G +H L L +G+++ LG + +
Sbjct: 241 HAPQ---SLPSPL------------SFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQ 285
Query: 339 GLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESED 398
L S +A E +P K + IAAG +S AVT++GEV +WG G G+LG G + D
Sbjct: 286 QLQIDSSEA-LFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTND 344
Query: 399 LNEPTLAAVDS 409
P L ++ S
Sbjct: 345 QTSPELVSLGS 355
Score = 62.1 bits (144), Expect = 8e-10
Identities = 83/343 (24%), Positives = 134/343 (39%), Gaps = 34/343 (9%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIV-DVQAGGMHTIALDSSGKIWTFG 102
G+V T G+G GQLG G D++ T K V+ D ++ AG H+ + SG I+T G
Sbjct: 67 GKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCG 125
Query: 103 CNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGS 162
G LG + G HS L V +GS +
Sbjct: 126 NGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLG 185
Query: 163 MGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQ 222
PC D+ V I++ GDH ++ G F+ G G G A
Sbjct: 186 FSSDRIKSVNLPCVVSGLKDV--EVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAP 243
Query: 223 RSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGIT 282
+S +P+ ++ R+ A W H +D + +L LN +
Sbjct: 244 QS-------------LPSPLSFREVAVG-W-NHALLLTVDGEVFKL-GSTLNKQPEKQQL 287
Query: 283 GEKRKTALFSPT-ECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLG 341
ALF + D ++ + +A G H+ + NG++ G E+G+LGLG
Sbjct: 288 QIDSSEALFEKVPDFDGVKVM-------QIAAGAEHSAAVTENGEVKTWGWGEHGQLGLG 340
Query: 342 DKSGDAETLELIP----KLQNKKCISIAAGTSNSFAVTDSGEV 380
+ + D + EL+ L+ K+ I + G+ ++AV E+
Sbjct: 341 N-TNDQTSPELVSLGSIDLRTKE-IKVYCGSGFTYAVKRKQEL 381
Score = 60.5 bits (140), Expect = 3e-09
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 253 AGHHATFVLDAQHARLFAFGLNNYGQLGITG--EKRKTALFSPTECDALRAVGDDHAWSA 310
A H T + + +++++G GQLG T ++ L S T ++ S
Sbjct: 2 AEHGETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSI---------SM 52
Query: 311 VALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSN 370
+A G H + L + G+++ GR G+LG GD + +L+ + AAG S+
Sbjct: 53 LACGGAHVIALTSGGKVFTWGRGSSGQLGHGDIL-NITLPKLVSFFDDSVITQAAAGWSH 111
Query: 371 SFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPT-LAAVDSRAPLRVSAGGQHTVLL 425
S V+DSG +++ G GS G+LG G++ L+ P ++ ++ + V+ G +H+++L
Sbjct: 112 SGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVL 167
Score = 59.7 bits (138), Expect = 4e-09
Identities = 84/342 (24%), Positives = 144/342 (42%), Gaps = 46/342 (13%)
Query: 97 KIWTFGCNDEGALGRATSNEKDEGTPKQXXXXX--XXXXXXXGDSHSAALLQNGDVYAWG 154
++W++G +G LG T+ +DE P+ G +H AL G V+ WG
Sbjct: 16 QVWSWGAGTDGQLG--TTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWG 73
Query: 155 SFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAV--EIASGGDHLVVLTTSGGVFTLGCG 212
R S G +G G + P + + +V + A+G H ++ SG +FT G G
Sbjct: 74 --RGSSGQLG---HG-DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG 127
Query: 213 EQGQLGRLAQRSASRDARQGFSALLVPARVT--LRQAAARVWAGHHATFVLDAQHARLFA 270
GQLG S S PA+V+ + V G + VL A + ++
Sbjct: 128 SFGQLGHGDTLSLS-----------TPAKVSHFNNDSVKMVACGMRHSLVLFAGN-QVCG 175
Query: 271 FGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYAL 330
FG GQLG + ++ K+ P L+ D ++ H+ ++A+GQ ++
Sbjct: 176 FGSGKRGQLGFSSDRIKSVNL-PCVVSGLK----DVEVVRISANGDHSAAISADGQFFSW 230
Query: 331 GRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWG-----M 385
GR G G D + +P + + +A G +++ +T GEV+ G
Sbjct: 231 GR---GFCG----GPDVHAPQSLPSPLSFR--EVAVGWNHALLLTVDGEVFKLGSTLNKQ 281
Query: 386 GSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVE 427
+ +L SE L E + D ++++AG +H+ + E
Sbjct: 282 PEKQQLQIDSSEALFE-KVPDFDGVKVMQIAAGAEHSAAVTE 322
>At3g26100.2 68416.m03250 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 532
Score = 91.1 bits (216), Expect = 2e-18
Identities = 100/376 (26%), Positives = 158/376 (42%), Gaps = 41/376 (10%)
Query: 39 APKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKI 98
A +G V T G + GQLG G E + G +I+ AG T+ + GK+
Sbjct: 157 AVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKV 216
Query: 99 WTFGCNDEGALGRATSNEKDEGTPK--QXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSF 156
+ G G K TP+ G+ +A L + G VY +
Sbjct: 217 YACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWG 276
Query: 157 RDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLT---TSGGVFTLGCGE 213
D E +P P++ P V+IA+G +L+ L V+++GCG
Sbjct: 277 NDGRLGHQTEAADVEPRPLLGPLE---NVPVVQIAAGYCYLLALACQPNGMSVYSVGCGL 333
Query: 214 QGQLGRLAQRSASRDAR--QGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAF 271
G+LG R+ + R + F L + RV AA W HA V Q R+ +
Sbjct: 334 GGKLGH-GSRTDEKYPRVIEQFQILNLQPRV----VAAGAW---HAAVV--GQDGRVCTW 383
Query: 272 GLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALG 331
G YG LG E+ ++ P + L V H VA G + T ++ +G +Y+ G
Sbjct: 384 GWGRYGCLGHGNEECESV---PKVVEGLSHVKAVH----VATGDYTTFVVSDDGDVYSFG 436
Query: 332 RCEYGRLG---LGDKSGDAETLELIP------KLQNKKCISIAAGTS-----NSFAVTDS 377
E LG D+ G+ L P K N++ + I+ S ++FA+T+S
Sbjct: 437 CGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTES 496
Query: 378 GEVYSWGMGSEGKLGT 393
G+++++G G +G+LGT
Sbjct: 497 GKLFAFGAGDQGQLGT 512
Score = 87.4 bits (207), Expect = 2e-17
Identities = 79/317 (24%), Positives = 132/317 (41%), Gaps = 18/317 (5%)
Query: 84 AGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAA 143
AG H++A+ S G+++TFG N+ G LG + ++ P + G + +
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 209
Query: 144 LLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEP--AVEIASGGDHLVVLT 201
+ +G VYA G G G+ KP P + + V+ A G VL+
Sbjct: 210 ISDDGKVYACGKESFGEAEYG----GQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLS 265
Query: 202 TSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVL 261
G V+T G G+LG + +A + R LL P ++ AG+ L
Sbjct: 266 REGKVYTFSWGNDGRLGHQTE-AADVEPRP----LLGPLE---NVPVVQIAAGYCYLLAL 317
Query: 262 DAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTL 321
Q + + + G G G +T P + + + VA G H +
Sbjct: 318 ACQPNGMSVYSVG-CGLGGKLGHGSRTDEKYPRVIEQFQILNLQPR--VVAAGAWHAAVV 374
Query: 322 AANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVY 381
+G++ G YG LG G++ ++ +++ L + K + +A G +F V+D G+VY
Sbjct: 375 GQDGRVCTWGWGRYGCLGHGNEECESVP-KVVEGLSHVKAVHVATGDYTTFVVSDDGDVY 433
Query: 382 SWGMGSEGKLGTGESED 398
S+G G LG S D
Sbjct: 434 SFGCGESASLGHHPSFD 450
Score = 68.1 bits (159), Expect = 1e-11
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 189 EIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAA 248
+ +G H V +T+ G V+T G GQLG +R Q +L V + QAA
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEAR--IQPVRSL---QGVRIIQAA 201
Query: 249 ARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAW 308
A A +L + +++A G ++G+ G+ K + +P +L+ + A
Sbjct: 202 AGA-----ARTMLISDDGKVYACGKESFGEAEYGGQGTK-PVTTPQLVTSLKNIFVVQA- 254
Query: 309 SAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGT 368
A+G + T L+ G++Y GRLG ++ D E L+ L+N + IAAG
Sbjct: 255 ---AIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGY 311
Query: 369 SNSFAVT---DSGEVYSWGMGSEGKLGTGESEDLNEPTLA---AVDSRAPLRVSAGGQHT 422
A+ + VYS G G GKLG G D P + + + P V+AG H
Sbjct: 312 CYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHA 371
Query: 423 VLLVEE 428
++ ++
Sbjct: 372 AVVGQD 377
Score = 61.7 bits (143), Expect = 1e-09
Identities = 72/275 (26%), Positives = 115/275 (41%), Gaps = 31/275 (11%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIAL---DSSGK 97
+ G+V T G+ G+LG + + + L + +V + AG + +AL +
Sbjct: 266 REGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMS 325
Query: 98 IWTFGCNDEGALGRAT-SNEKDEGTPKQXXXXXXX-XXXXXGDSHSAALLQNGDVYAWGS 155
+++ GC G LG + ++EK +Q G H+A + Q+G V WG
Sbjct: 326 VYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGW 385
Query: 156 FRDSHGSMGLVVRGREGKPCKEPVKIDIG---EPAVEIASGGDHLVVLTTSGGVFTLGCG 212
R +G +G G E C+ K+ G AV +A+G V++ G V++ GCG
Sbjct: 386 GR--YGCLG---HGNE--ECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCG 438
Query: 213 EQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARV----------WAGHHATFVLD 262
E LG S + + L +L+Q R+ W H TF L
Sbjct: 439 ESASLGH--HPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAH--TFAL- 493
Query: 263 AQHARLFAFGLNNYGQLGITGEKRKTALFSPTECD 297
+ +LFAFG + GQLG K + P + D
Sbjct: 494 TESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVD 528
Score = 59.7 bits (138), Expect = 4e-09
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 30/300 (10%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGR-EGKPCKEPVKIDIGEPAVEIASGGD 195
G HS A+ G+VY +G ++ G +G G E + +PV+ G ++ A+G
Sbjct: 151 GPGHSVAVTSKGEVYTFGY--NNSGQLG---HGHTEDEARIQPVRSLQGVRIIQAAAGAA 205
Query: 196 HLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWA-- 253
++++ G V+ CG++ G + QG + P VT + V A
Sbjct: 206 RTMLISDDGKVYA--CGKES-FGE------AEYGGQGTKPVTTPQLVTSLKNIFVVQAAI 256
Query: 254 GHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVAL 313
G++ T VL ++ +++ F N G+LG E + E L ++ +A
Sbjct: 257 GNYFTAVL-SREGKVYTFSWGNDGRLGHQTEA------ADVEPRPLLGPLENVPVVQIAA 309
Query: 314 GQHHTLTLAA--NGQ-IYALGRCEYGRLGLGDKSGDAETLELIPKLQ--NKKCISIAAGT 368
G + L LA NG +Y++G G+LG G ++ D + +I + Q N + +AAG
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRT-DEKYPRVIEQFQILNLQPRVVAAGA 368
Query: 369 SNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEE 428
++ V G V +WG G G LG G E + P + S A G +T +V +
Sbjct: 369 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSD 428
Score = 50.0 bits (114), Expect = 4e-06
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 309 SAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGT 368
S G H++ + + G++Y G G+LG G +A ++ + LQ + I AAG
Sbjct: 146 SQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEAR-IQPVRSLQGVRIIQAAAGA 204
Query: 369 SNSFAVTDSGEVYSWGMGS--EGKLGTGESEDLNEPTL-AAVDSRAPLRVSAGGQHTVLL 425
+ + ++D G+VY+ G S E + G ++ + P L ++ + ++ + G T +L
Sbjct: 205 ARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL 264
Query: 426 VEE 428
E
Sbjct: 265 SRE 267
>At3g26100.1 68416.m03251 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 432
Score = 91.1 bits (216), Expect = 2e-18
Identities = 100/376 (26%), Positives = 158/376 (42%), Gaps = 41/376 (10%)
Query: 39 APKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKI 98
A +G V T G + GQLG G E + G +I+ AG T+ + GK+
Sbjct: 57 AVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKV 116
Query: 99 WTFGCNDEGALGRATSNEKDEGTPK--QXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSF 156
+ G G K TP+ G+ +A L + G VY +
Sbjct: 117 YACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWG 176
Query: 157 RDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLT---TSGGVFTLGCGE 213
D E +P P++ P V+IA+G +L+ L V+++GCG
Sbjct: 177 NDGRLGHQTEAADVEPRPLLGPLE---NVPVVQIAAGYCYLLALACQPNGMSVYSVGCGL 233
Query: 214 QGQLGRLAQRSASRDAR--QGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAF 271
G+LG R+ + R + F L + RV AA W HA V Q R+ +
Sbjct: 234 GGKLGH-GSRTDEKYPRVIEQFQILNLQPRV----VAAGAW---HAAVV--GQDGRVCTW 283
Query: 272 GLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALG 331
G YG LG E+ ++ P + L V H VA G + T ++ +G +Y+ G
Sbjct: 284 GWGRYGCLGHGNEECESV---PKVVEGLSHVKAVH----VATGDYTTFVVSDDGDVYSFG 336
Query: 332 RCEYGRLG---LGDKSGDAETLELIP------KLQNKKCISIAAGTS-----NSFAVTDS 377
E LG D+ G+ L P K N++ + I+ S ++FA+T+S
Sbjct: 337 CGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTES 396
Query: 378 GEVYSWGMGSEGKLGT 393
G+++++G G +G+LGT
Sbjct: 397 GKLFAFGAGDQGQLGT 412
Score = 87.4 bits (207), Expect = 2e-17
Identities = 79/317 (24%), Positives = 132/317 (41%), Gaps = 18/317 (5%)
Query: 84 AGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAA 143
AG H++A+ S G+++TFG N+ G LG + ++ P + G + +
Sbjct: 50 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 109
Query: 144 LLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEP--AVEIASGGDHLVVLT 201
+ +G VYA G G G+ KP P + + V+ A G VL+
Sbjct: 110 ISDDGKVYACGKESFGEAEYG----GQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLS 165
Query: 202 TSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVL 261
G V+T G G+LG + +A + R LL P ++ AG+ L
Sbjct: 166 REGKVYTFSWGNDGRLGHQTE-AADVEPRP----LLGPLE---NVPVVQIAAGYCYLLAL 217
Query: 262 DAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTL 321
Q + + + G G G +T P + + + VA G H +
Sbjct: 218 ACQPNGMSVYSVG-CGLGGKLGHGSRTDEKYPRVIEQFQILNLQPR--VVAAGAWHAAVV 274
Query: 322 AANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVY 381
+G++ G YG LG G++ ++ +++ L + K + +A G +F V+D G+VY
Sbjct: 275 GQDGRVCTWGWGRYGCLGHGNEECESVP-KVVEGLSHVKAVHVATGDYTTFVVSDDGDVY 333
Query: 382 SWGMGSEGKLGTGESED 398
S+G G LG S D
Sbjct: 334 SFGCGESASLGHHPSFD 350
Score = 68.1 bits (159), Expect = 1e-11
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 189 EIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAA 248
+ +G H V +T+ G V+T G GQLG +R Q +L V + QAA
Sbjct: 47 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEAR--IQPVRSL---QGVRIIQAA 101
Query: 249 ARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAW 308
A A +L + +++A G ++G+ G+ K + +P +L+ + A
Sbjct: 102 AGA-----ARTMLISDDGKVYACGKESFGEAEYGGQGTK-PVTTPQLVTSLKNIFVVQA- 154
Query: 309 SAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGT 368
A+G + T L+ G++Y GRLG ++ D E L+ L+N + IAAG
Sbjct: 155 ---AIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGY 211
Query: 369 SNSFAVT---DSGEVYSWGMGSEGKLGTGESEDLNEPTLA---AVDSRAPLRVSAGGQHT 422
A+ + VYS G G GKLG G D P + + + P V+AG H
Sbjct: 212 CYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHA 271
Query: 423 VLLVEE 428
++ ++
Sbjct: 272 AVVGQD 277
Score = 61.7 bits (143), Expect = 1e-09
Identities = 72/275 (26%), Positives = 115/275 (41%), Gaps = 31/275 (11%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIAL---DSSGK 97
+ G+V T G+ G+LG + + + L + +V + AG + +AL +
Sbjct: 166 REGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMS 225
Query: 98 IWTFGCNDEGALGRAT-SNEKDEGTPKQXXXXXXX-XXXXXGDSHSAALLQNGDVYAWGS 155
+++ GC G LG + ++EK +Q G H+A + Q+G V WG
Sbjct: 226 VYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGW 285
Query: 156 FRDSHGSMGLVVRGREGKPCKEPVKIDIG---EPAVEIASGGDHLVVLTTSGGVFTLGCG 212
R +G +G G E C+ K+ G AV +A+G V++ G V++ GCG
Sbjct: 286 GR--YGCLG---HGNE--ECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCG 338
Query: 213 EQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARV----------WAGHHATFVLD 262
E LG S + + L +L+Q R+ W H TF L
Sbjct: 339 ESASLGH--HPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAH--TFAL- 393
Query: 263 AQHARLFAFGLNNYGQLGITGEKRKTALFSPTECD 297
+ +LFAFG + GQLG K + P + D
Sbjct: 394 TESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVD 428
Score = 59.7 bits (138), Expect = 4e-09
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 30/300 (10%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGR-EGKPCKEPVKIDIGEPAVEIASGGD 195
G HS A+ G+VY +G ++ G +G G E + +PV+ G ++ A+G
Sbjct: 51 GPGHSVAVTSKGEVYTFGY--NNSGQLG---HGHTEDEARIQPVRSLQGVRIIQAAAGAA 105
Query: 196 HLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWA-- 253
++++ G V+ CG++ G + QG + P VT + V A
Sbjct: 106 RTMLISDDGKVYA--CGKES-FGE------AEYGGQGTKPVTTPQLVTSLKNIFVVQAAI 156
Query: 254 GHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVAL 313
G++ T VL ++ +++ F N G+LG E + E L ++ +A
Sbjct: 157 GNYFTAVL-SREGKVYTFSWGNDGRLGHQTEA------ADVEPRPLLGPLENVPVVQIAA 209
Query: 314 GQHHTLTLAA--NGQ-IYALGRCEYGRLGLGDKSGDAETLELIPKLQ--NKKCISIAAGT 368
G + L LA NG +Y++G G+LG G ++ D + +I + Q N + +AAG
Sbjct: 210 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRT-DEKYPRVIEQFQILNLQPRVVAAGA 268
Query: 369 SNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEE 428
++ V G V +WG G G LG G E + P + S A G +T +V +
Sbjct: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSD 328
Score = 50.0 bits (114), Expect = 4e-06
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 309 SAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGT 368
S G H++ + + G++Y G G+LG G +A ++ + LQ + I AAG
Sbjct: 46 SQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEAR-IQPVRSLQGVRIIQAAAGA 104
Query: 369 SNSFAVTDSGEVYSWGMGS--EGKLGTGESEDLNEPTL-AAVDSRAPLRVSAGGQHTVLL 425
+ + ++D G+VY+ G S E + G ++ + P L ++ + ++ + G T +L
Sbjct: 105 ARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL 164
Query: 426 VEE 428
E
Sbjct: 165 SRE 167
>At3g47660.1 68416.m05188 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1)
Length = 951
Score = 88.6 bits (210), Expect = 8e-18
Identities = 89/349 (25%), Positives = 145/349 (41%), Gaps = 26/349 (7%)
Query: 82 VQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHS 141
+ G + + + G+++++G G LG + G+ H+
Sbjct: 301 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHT 360
Query: 142 AALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLT 201
A+ +GD+YAWG + G +GL KP + +++ G I+ G H +T
Sbjct: 361 CAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQME-GIYVKAISCGPWHTAFVT 419
Query: 202 TSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVW--AGHHATF 259
+ G +FT G G G LG R ++ R+ L R +AA VW A + F
Sbjct: 420 SEGKLFTFGDGTFGALGH-GDRISTNIPRE--VEALNGCRTI--KAACGVWHSAAVVSVF 474
Query: 260 VLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTL 319
+LF +G + G+LG + + TE D ++ VA GQ T+
Sbjct: 475 GEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTT-------SFQQVACGQSITV 527
Query: 320 TLAANGQIYALGRCEYGRLGLGDKSGD-AETLELIPKLQNKKCIS-IAAGTSNSFAVTDS 377
L+ +GQ+YA+G D S D I K + +A G + +
Sbjct: 528 ALSMSGQVYAMGTA--------DPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSK 579
Query: 378 GEVYSWGMGSEGKLGTGESEDLNEPTLA-AVDSRAPLRVSAGGQHTVLL 425
EVY+WG GS G+LG G++E PTL A+ + +V G +T +
Sbjct: 580 AEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 628
Score = 45.6 bits (103), Expect = 8e-05
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 310 AVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTS 369
+++ G ++ + + GQ+Y+ G GRLG G S +LI + G
Sbjct: 300 SISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHP-KLIDEFNGSTVELADCGEF 358
Query: 370 NSFAVTDSGEVYSWGMG--SEGKLGTGESEDLNEPT--LAAVDSRAPLRVSAGGQHTVLL 425
++ AVT SG++Y+WG G + G LG G +P L ++ +S G HT +
Sbjct: 359 HTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFV 418
Query: 426 VEE 428
E
Sbjct: 419 TSE 421
Score = 41.1 bits (92), Expect = 0.002
Identities = 77/343 (22%), Positives = 132/343 (38%), Gaps = 47/343 (13%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDV-QAGGMHTIALDSSGKIWT 100
K+G++ + G+ G+LG G K + V++ G HT A+ +SG ++
Sbjct: 313 KQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYA 371
Query: 101 FGCNDEGA----LGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSF 156
+G D A LG S+ K Q G H+A + G ++ +G
Sbjct: 372 WGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIYVKAISCGPWHTAFVTSEGKLFTFGD- 429
Query: 157 RDSHGSMGLVVRG-REGKPCKEPVKIDIGEPAVEIASGGDHLVVL-------TTSGGVFT 208
G+ G + G R V+ G ++ A G H + T+SG +FT
Sbjct: 430 ----GTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFT 485
Query: 209 LGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAA--RVWAGHHATFVLDAQHA 266
G G+ G+LG L+P+ VT + +V G T L +
Sbjct: 486 WGDGDDGRLG-----------HGDIECRLIPSCVTELDTTSFQQVACGQSITVAL-SMSG 533
Query: 267 RLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQ 326
+++A G T + + +P+ + +G VA G HH L + +
Sbjct: 534 QVYAMG---------TADPSHDIVRAPSCIEG--GLGKSFV-QEVACGFHHIAVLNSKAE 581
Query: 327 IYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTS 369
+Y G+ G+LG GD L+ L+ K+ + G++
Sbjct: 582 VYTWGKGSNGQLGHGDTEYRCMP-TLVKALKGKQVRKVVCGSN 623
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 336 GRLGLG-DKSGDAETL---ELIPKLQNKKCI----SIAAGTSNSFAVTDSGEVYSWGMGS 387
G LG G KSG + +L +PK+ SI+ GT+ + VT G++YSWG S
Sbjct: 265 GLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEES 324
Query: 388 EGKLGTGESEDLNEPTL 404
G+LG G + P L
Sbjct: 325 GGRLGHGVCSYVPHPKL 341
>At3g53830.1 68416.m05947 regulator of chromosome condensation
(RCC1) family protein / UVB-resistance protein-related
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to UVB-resistance protein
UVR8 (GIi;10177674) [Arabidopsis thaliana]
Length = 487
Score = 81.0 bits (191), Expect = 2e-15
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 254 GHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVAL 313
G H+ + DA L FG YGQ G + + +E ++R +VA
Sbjct: 319 GRHSAAITDA--GGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRM-------ESVAA 369
Query: 314 GQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELI---PKLQNKKCISIAAGTSN 370
G HT+ ++++G++YA G ++G+LG G + AE L + L+ K +++ G +
Sbjct: 370 GLWHTICISSDGKVYAFGGNQFGQLGTG--TDHAEILPRLLDGQNLEGKHAKAVSCGARH 427
Query: 371 SFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLL 425
S + + G++ WG G+LG G++ D N PT +D +V+ G HT+LL
Sbjct: 428 SAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQLDGCRLRKVACGWWHTLLL 482
Score = 66.9 bits (156), Expect = 3e-11
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 15/159 (9%)
Query: 184 GEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVT 243
G+ I+ GG H +T +GG+ T G G GQ G + D + + V + V
Sbjct: 309 GQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCG----HGNTNDQLRPMAVSEVKS-VR 363
Query: 244 LRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVG 303
+ AA +W H + + +++AFG N +GQLG TG L P D G
Sbjct: 364 MESVAAGLW---HTICI--SSDGKVYAFGGNQFGQLG-TGTDHAEIL--PRLLDGQNLEG 415
Query: 304 DDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGD 342
HA AV+ G H+ LA +GQ+ G +YG+LGLGD
Sbjct: 416 -KHA-KAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGD 452
Score = 53.6 bits (123), Expect = 3e-07
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 7/162 (4%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G ++T G G GQ G G + ++ V AG HTI + S GK++ FG
Sbjct: 329 GGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGG 388
Query: 104 NDEGALGRATSNEK--DEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHG 161
N G LG T + + Q G HSA L ++G + WG + +G
Sbjct: 389 NQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWG--WNKYG 446
Query: 162 SMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTS 203
+GL P + V++D G ++A G H ++L S
Sbjct: 447 QLGLGDTNDRNIPTQ--VQLD-GCRLRKVACGWWHTLLLGDS 485
Score = 49.6 bits (113), Expect = 5e-06
Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 2/169 (1%)
Query: 50 GQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGAL 109
G G L + TT + G I + GG H+ A+ +G + TFG G
Sbjct: 283 GSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQC 342
Query: 110 GRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRG 169
G +N++ G H+ + +G VYA+G + G +G
Sbjct: 343 GHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGG--NQFGQLGTGTDH 400
Query: 170 REGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLG 218
E P + G+ A ++ G H VL G + G + GQLG
Sbjct: 401 AEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLG 449
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDH 196
G + A+ + G + WGS D S V G+ G+ EP + P V+ +SG H
Sbjct: 60 GCGFAMAISEKGKLITWGSTDDEGQSY--VASGKHGET-PEPFPLPTEAPVVQASSGWAH 116
Query: 197 LVVLTTSGGVFTLGCGE 213
V+T +G FT G E
Sbjct: 117 CAVVTETGEAFTWGWKE 133
Score = 37.1 bits (82), Expect = 0.027
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 363 SIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEP-TLAAVDSRAPLRVSAGGQH 421
+I+ G +S A+TD+G + ++G G G+ G G + D P ++ V S V+AG H
Sbjct: 314 AISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWH 373
Query: 422 TVLL 425
T+ +
Sbjct: 374 TICI 377
Score = 35.5 bits (78), Expect = 0.083
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 76 GDKIVDVQAGGM-HTIALDSSGKIWTFGC-NDEGALGRATSNEKDEGTPKQXXXXXXXXX 133
GD DV GG +A+ GK+ T+G +DEG A+ + P
Sbjct: 50 GDSWKDVCGGGCGFAMAISEKGKLITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQ 109
Query: 134 XXXGDSHSAALLQNGDVYAWG 154
G +H A + + G+ + WG
Sbjct: 110 ASSGWAHCAVVTETGEAFTWG 130
Score = 32.7 bits (71), Expect = 0.59
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Query: 287 KTALFSPTECDALRAVGDDHAWSAVALGQ-HHTLTLAANGQIYALGRCEYGRLGLGDKSG 345
K+ + SP AV +W V G + ++ G++ G +
Sbjct: 32 KSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGKLITWGSTDDEGQSYVASGK 91
Query: 346 DAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWG----MGSEGKLGTGESEDLNE 401
ET E P + ++G ++ VT++GE ++WG + S+ +G +S +
Sbjct: 92 HGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWKECIPSKDPVGKQQSGSSEQ 151
Query: 402 PTLAAVDSRA 411
+A+ S A
Sbjct: 152 GDIASQGSNA 161
Score = 32.7 bits (71), Expect = 0.59
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 374 VTDSGEVYSWGMGSEGKLGTG 394
V+D G+++ WG G EG+LG G
Sbjct: 244 VSDLGQIWGWGYGGEGQLGLG 264
Score = 32.3 bits (70), Expect = 0.78
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 16/84 (19%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIAL---DS---- 94
KR RV T G G D TT LG +I V GG HT+AL DS
Sbjct: 180 KRRRVSTAKDETEGHTS-GGDFFATTPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDD 238
Query: 95 --------SGKIWTFGCNDEGALG 110
G+IW +G EG LG
Sbjct: 239 HVFTEVSDLGQIWGWGYGGEGQLG 262
>At3g15430.2 68416.m01958 regulator of chromosome condensation
(RCC1) family protein low similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 488
Score = 78.2 bits (184), Expect = 1e-14
Identities = 85/313 (27%), Positives = 126/313 (40%), Gaps = 22/313 (7%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMH-TIALDSSGKIWTFG 102
G+VLTCG G + + K V AL A G+H T+ L G +T G
Sbjct: 182 GQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCG 241
Query: 103 CNDEGALGRATSNEKDEGTPKQXXXXXXXX---XXXXGDSHSAALLQNGDVYAWGSFRDS 159
N G LG + D PK G S+ A+ Q+G VY++GS S
Sbjct: 242 SNTHGQLGHGDT--LDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGS--GS 297
Query: 160 HGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGR 219
+ +G + E +P G + +++G +H V L ++G V+T G G G LG
Sbjct: 298 NFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGH 357
Query: 220 LAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQL 279
+ +LV L A +V A TFVL + L+ FG +G L
Sbjct: 358 GDENDKITPQ------VLVNLNNCL---AVQVCARKRKTFVL-VEGGLLYGFGWMGFGSL 407
Query: 280 GITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLG 339
G + P + L+ H S V+ G +HT+ + G+I+ G E +LG
Sbjct: 408 GFPDRGVSDKVLRPRVLECLKP----HRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463
Query: 340 LGDKSGDAETLEL 352
G E E+
Sbjct: 464 HDSLRGCLEPTEI 476
Score = 77.4 bits (182), Expect = 2e-14
Identities = 73/249 (29%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 181 IDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPA 240
++ + ++IA+G H +++ S V++ G G L ++ + F+ + P
Sbjct: 107 VETSQGKMQIATGKYHTLLINNSK-VYSCGVSLSGVLAHGSETTQC----VAFTPIEFPF 161
Query: 241 RVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALR 300
+ Q +A +H+ FVL Q ++ G N+ G R +F P +AL+
Sbjct: 162 PAQVAQVSA---TQNHSAFVL--QSGQVLTCGDNSSHCCGHLDTSRP--IFRPKLVEALK 214
Query: 301 AVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQN-K 359
VA G H T+ L+ G Y G +G+LG GD D +++ L+
Sbjct: 215 GT----PCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTL-DRPVPKVVEFLKTIG 269
Query: 360 KCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAP---LRVS 416
+ IAAG S AVT G VYS+G GS LG GE +D +P + R LRVS
Sbjct: 270 PVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVS 329
Query: 417 AGGQHTVLL 425
AG +H V L
Sbjct: 330 AGDEHAVAL 338
Score = 71.7 bits (168), Expect = 1e-12
Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 22/260 (8%)
Query: 28 KRGAIQLEIPTAPKKRGRVLTCGQGDVGQLGLGE--DVVETTKFKYVTALGDKIVDVQAG 85
K+ A L + G TCG GQLG G+ D +++ +G +V + AG
Sbjct: 219 KQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIG-PVVQIAAG 277
Query: 86 GMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXX----XXXXXXXXXGDSHS 141
+ +A+ G +++FG LG ++DE P+ GD H+
Sbjct: 278 PSYVLAVTQDGSVYSFGSGSNFCLGH--GEQQDELQPRVIQAFKRKGIHILRVSAGDEHA 335
Query: 142 AALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGE-PAVEIASGGDHLVVL 200
AL NG VY WG G G + G E V +++ AV++ + VL
Sbjct: 336 VALDSNGRVYTWGK-----GYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVL 390
Query: 201 TTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFV 260
G ++ G G LG + + + R L P RV ++V G + T V
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV------SQVSTGLYHTIV 444
Query: 261 LDAQHARLFAFGLNNYGQLG 280
+ Q R+F FG N QLG
Sbjct: 445 V-TQRGRIFGFGDNERAQLG 463
Score = 67.7 bits (158), Expect = 2e-11
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 26/289 (8%)
Query: 144 LLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPA--VEIASGGDHLVVLT 201
L+ N VY+ G G++ G E C I+ PA ++++ +H +
Sbjct: 125 LINNSKVYSCGV-----SLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVL 179
Query: 202 TSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVL 261
SG V T G G L +R F LV A +V AG H T L
Sbjct: 180 QSGQVLTCGDNSSHCCGHLDT------SRPIFRPKLVEA--LKGTPCKQVAAGLHFTVFL 231
Query: 262 DAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTL 321
++ + G N +GQLG G+ + P + L+ +G +A G + L +
Sbjct: 232 -SREGHAYTCGSNTHGQLG-HGDTLDRPV--PKVVEFLKTIGPV---VQIAAGPSYVLAV 284
Query: 322 AANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNK--KCISIAAGTSNSFAVTDSGE 379
+G +Y+ G LG G++ + + +I + K + ++AG ++ A+ +G
Sbjct: 285 TQDGSVYSFGSGSNFCLGHGEQQDELQP-RVIQAFKRKGIHILRVSAGDEHAVALDSNGR 343
Query: 380 VYSWGMGSEGKLGTGESEDLNEP-TLAAVDSRAPLRVSAGGQHTVLLVE 427
VY+WG G G LG G+ D P L +++ ++V A + T +LVE
Sbjct: 344 VYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVE 392
Score = 63.7 bits (148), Expect = 3e-10
Identities = 82/366 (22%), Positives = 140/366 (38%), Gaps = 28/366 (7%)
Query: 45 RVLTCGQGDVGQLGLGEDVVETTKFKYVT-ALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
+V +CG G L G + + F + ++ V A H+ + SG++ T G
Sbjct: 130 KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGD 189
Query: 104 NDEGALGRATSNEKDEGTPK--QXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHG 161
N G ++ + PK + G + L + G Y GS ++HG
Sbjct: 190 NSSHCCGHLDTS-RPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGS--NTHG 246
Query: 162 SMGLVVRGREGKPCKEPVKI--DIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGR 219
+G +P + V+ IG P V+IA+G +++ +T G V++ G G LG
Sbjct: 247 QLGH--GDTLDRPVPKVVEFLKTIG-PVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGH 303
Query: 220 LAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQL 279
Q+ + ++ A RV AG LD+ + R++ +G G L
Sbjct: 304 GEQQDELQPR-------VIQAFKRKGIHILRVSAGDEHAVALDS-NGRVYTWGKGYCGAL 355
Query: 280 GITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLG 339
G E K + AV V + T L G +Y G +G LG
Sbjct: 356 GHGDENDKITPQVLVNLNNCLAV-------QVCARKRKTFVLVEGGLLYGFGWMGFGSLG 408
Query: 340 LGDKSGDAETLE--LIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESE 397
D+ + L ++ L+ + ++ G ++ VT G ++ +G +LG
Sbjct: 409 FPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLR 468
Query: 398 DLNEPT 403
EPT
Sbjct: 469 GCLEPT 474
>At3g15430.1 68416.m01957 regulator of chromosome condensation
(RCC1) family protein low similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 488
Score = 78.2 bits (184), Expect = 1e-14
Identities = 85/313 (27%), Positives = 126/313 (40%), Gaps = 22/313 (7%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMH-TIALDSSGKIWTFG 102
G+VLTCG G + + K V AL A G+H T+ L G +T G
Sbjct: 182 GQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCG 241
Query: 103 CNDEGALGRATSNEKDEGTPKQXXXXXXXX---XXXXGDSHSAALLQNGDVYAWGSFRDS 159
N G LG + D PK G S+ A+ Q+G VY++GS S
Sbjct: 242 SNTHGQLGHGDT--LDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGS--GS 297
Query: 160 HGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGR 219
+ +G + E +P G + +++G +H V L ++G V+T G G G LG
Sbjct: 298 NFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGH 357
Query: 220 LAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQL 279
+ +LV L A +V A TFVL + L+ FG +G L
Sbjct: 358 GDENDKITPQ------VLVNLNNCL---AVQVCARKRKTFVL-VEGGLLYGFGWMGFGSL 407
Query: 280 GITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLG 339
G + P + L+ H S V+ G +HT+ + G+I+ G E +LG
Sbjct: 408 GFPDRGVSDKVLRPRVLECLKP----HRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463
Query: 340 LGDKSGDAETLEL 352
G E E+
Sbjct: 464 HDSLRGCLEPTEI 476
Score = 77.4 bits (182), Expect = 2e-14
Identities = 73/249 (29%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 181 IDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPA 240
++ + ++IA+G H +++ S V++ G G L ++ + F+ + P
Sbjct: 107 VETSQGKMQIATGKYHTLLINNSK-VYSCGVSLSGVLAHGSETTQC----VAFTPIEFPF 161
Query: 241 RVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALR 300
+ Q +A +H+ FVL Q ++ G N+ G R +F P +AL+
Sbjct: 162 PAQVAQVSA---TQNHSAFVL--QSGQVLTCGDNSSHCCGHLDTSRP--IFRPKLVEALK 214
Query: 301 AVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQN-K 359
VA G H T+ L+ G Y G +G+LG GD D +++ L+
Sbjct: 215 GT----PCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTL-DRPVPKVVEFLKTIG 269
Query: 360 KCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAP---LRVS 416
+ IAAG S AVT G VYS+G GS LG GE +D +P + R LRVS
Sbjct: 270 PVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVS 329
Query: 417 AGGQHTVLL 425
AG +H V L
Sbjct: 330 AGDEHAVAL 338
Score = 71.7 bits (168), Expect = 1e-12
Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 22/260 (8%)
Query: 28 KRGAIQLEIPTAPKKRGRVLTCGQGDVGQLGLGE--DVVETTKFKYVTALGDKIVDVQAG 85
K+ A L + G TCG GQLG G+ D +++ +G +V + AG
Sbjct: 219 KQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIG-PVVQIAAG 277
Query: 86 GMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXX----XXXXXXXXXGDSHS 141
+ +A+ G +++FG LG ++DE P+ GD H+
Sbjct: 278 PSYVLAVTQDGSVYSFGSGSNFCLGH--GEQQDELQPRVIQAFKRKGIHILRVSAGDEHA 335
Query: 142 AALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGE-PAVEIASGGDHLVVL 200
AL NG VY WG G G + G E V +++ AV++ + VL
Sbjct: 336 VALDSNGRVYTWGK-----GYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVL 390
Query: 201 TTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFV 260
G ++ G G LG + + + R L P RV ++V G + T V
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV------SQVSTGLYHTIV 444
Query: 261 LDAQHARLFAFGLNNYGQLG 280
+ Q R+F FG N QLG
Sbjct: 445 V-TQRGRIFGFGDNERAQLG 463
Score = 67.7 bits (158), Expect = 2e-11
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 26/289 (8%)
Query: 144 LLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPA--VEIASGGDHLVVLT 201
L+ N VY+ G G++ G E C I+ PA ++++ +H +
Sbjct: 125 LINNSKVYSCGV-----SLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVL 179
Query: 202 TSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVL 261
SG V T G G L +R F LV A +V AG H T L
Sbjct: 180 QSGQVLTCGDNSSHCCGHLDT------SRPIFRPKLVEA--LKGTPCKQVAAGLHFTVFL 231
Query: 262 DAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTL 321
++ + G N +GQLG G+ + P + L+ +G +A G + L +
Sbjct: 232 -SREGHAYTCGSNTHGQLG-HGDTLDRPV--PKVVEFLKTIGPV---VQIAAGPSYVLAV 284
Query: 322 AANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNK--KCISIAAGTSNSFAVTDSGE 379
+G +Y+ G LG G++ + + +I + K + ++AG ++ A+ +G
Sbjct: 285 TQDGSVYSFGSGSNFCLGHGEQQDELQP-RVIQAFKRKGIHILRVSAGDEHAVALDSNGR 343
Query: 380 VYSWGMGSEGKLGTGESEDLNEP-TLAAVDSRAPLRVSAGGQHTVLLVE 427
VY+WG G G LG G+ D P L +++ ++V A + T +LVE
Sbjct: 344 VYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVE 392
Score = 63.7 bits (148), Expect = 3e-10
Identities = 82/366 (22%), Positives = 140/366 (38%), Gaps = 28/366 (7%)
Query: 45 RVLTCGQGDVGQLGLGEDVVETTKFKYVT-ALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
+V +CG G L G + + F + ++ V A H+ + SG++ T G
Sbjct: 130 KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGD 189
Query: 104 NDEGALGRATSNEKDEGTPK--QXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHG 161
N G ++ + PK + G + L + G Y GS ++HG
Sbjct: 190 NSSHCCGHLDTS-RPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGS--NTHG 246
Query: 162 SMGLVVRGREGKPCKEPVKI--DIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGR 219
+G +P + V+ IG P V+IA+G +++ +T G V++ G G LG
Sbjct: 247 QLGH--GDTLDRPVPKVVEFLKTIG-PVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGH 303
Query: 220 LAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQL 279
Q+ + ++ A RV AG LD+ + R++ +G G L
Sbjct: 304 GEQQDELQPR-------VIQAFKRKGIHILRVSAGDEHAVALDS-NGRVYTWGKGYCGAL 355
Query: 280 GITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLG 339
G E K + AV V + T L G +Y G +G LG
Sbjct: 356 GHGDENDKITPQVLVNLNNCLAV-------QVCARKRKTFVLVEGGLLYGFGWMGFGSLG 408
Query: 340 LGDKSGDAETLE--LIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESE 397
D+ + L ++ L+ + ++ G ++ VT G ++ +G +LG
Sbjct: 409 FPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLR 468
Query: 398 DLNEPT 403
EPT
Sbjct: 469 GCLEPT 474
>At1g19880.1 68414.m02493 regulator of chromosome condensation
(RCC1) family protein low similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 538
Score = 78.2 bits (184), Expect = 1e-14
Identities = 85/408 (20%), Positives = 168/408 (41%), Gaps = 28/408 (6%)
Query: 38 TAPKKRGRVLTCGQGDVGQLG-----LGEDVVETTKFKYVTALGDKIVDVQAGGMHTIAL 92
++ +K G +L CG +G + ++V T+ + + + + V H +AL
Sbjct: 14 SSEEKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVAL 73
Query: 93 DSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYA 152
D G+ +T+G N++G LG ++D T G +H+ + +G
Sbjct: 74 DVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLG 133
Query: 153 WGSFRDSHGSMGLVVRGREGKPCKE-PVKIDIGEPAVEIASGGDHLVVLTTSGG--VFTL 209
+G + +G G + P+ + + +A G D V L+++ G + T
Sbjct: 134 FGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTA 193
Query: 210 GCGEQGQLGRLAQRSAS-RDA--RQGFSALLVPARVT--LRQAAARVWAGHHATFVLDAQ 264
G + GQLG + +D+ R + A P + + +V G + T +D +
Sbjct: 194 GLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVD-K 252
Query: 265 HARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAAN 324
+ ++ +G YG+LG +K + ++P D + + ++ G ++ A
Sbjct: 253 NGYVYTWGFGGYGRLGHREQKDE---WAPRRIDVFQRNNVLPPNAILSAGSANSACTAGG 309
Query: 325 GQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWG 384
GQ+Y G+ + GD D + + L + +G+ + F DS + SWG
Sbjct: 310 GQLYMWGKIKNN----GD---DWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCI-SWG 361
Query: 385 MGSEGKLGTGESEDLNEPTLAAVDSRAPLR---VSAGGQHTVLLVEET 429
G+LG G + + VD + V+ G H++++V+ T
Sbjct: 362 HAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRT 409
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 72.5 bits (170), Expect = 6e-13
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 33/295 (11%)
Query: 146 QNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKID-IGEPAVEIASGGD-HLVVLTTS 203
Q+ +V++WG+ G+ + G + K P ++D + +++ S H V ++T
Sbjct: 148 QSSEVFSWGN-----GANYQLGTGNQHVQ-KVPGRVDSLHGCFIKLVSAAKFHSVAISTH 201
Query: 204 GGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTL----RQAAARVWAGHHATF 259
G V+T G G G+LG D G +A++ P +V R+ A A HH
Sbjct: 202 GEVYTWGFGRGGRLGH-----PEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHT-- 254
Query: 260 VLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTL 319
V+ + ++ +G N GQLG T + +P + +L+A AV+ HT
Sbjct: 255 VIATEGGDVYTWGSNREGQLGYTSVDTQA---TPRKVTSLKA-----KIVAVSAANKHTA 306
Query: 320 TLAANGQIYALGRCEYGRLGLG-DKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSG 378
++ G+++ G + G+LG G S + L+ L+ K +IA+ ++ + + G
Sbjct: 307 VVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDG 366
Query: 379 EVYSWGMGSEGKLGTGESEDLNEP--TLAAVDSRAPLR---VSAGGQHTVLLVEE 428
EVY+WG S +L + TL R PLR ++AG H++ L E+
Sbjct: 367 EVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAED 421
Score = 71.3 bits (167), Expect = 1e-12
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 12/193 (6%)
Query: 41 KKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWT 100
++ V + G G QLG G V+ + + G I V A H++A+ + G+++T
Sbjct: 147 QQSSEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYT 206
Query: 101 FGCNDEGALGRAT----SNEKDEGTPKQXXXXXXXX---XXXXGDSHSAALLQNGDVYAW 153
+G G LG S + TP+Q H+ + GDVY W
Sbjct: 207 WGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTW 266
Query: 154 GSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGE 213
GS R+ G +G + P K + V +++ H V++ G VFT GC +
Sbjct: 267 GSNRE--GQLGYTSVDTQATPRKVT---SLKAKIVAVSAANKHTAVVSDCGEVFTWGCNK 321
Query: 214 QGQLGRLAQRSAS 226
+GQLG SAS
Sbjct: 322 EGQLGYGTSNSAS 334
Score = 69.7 bits (163), Expect = 4e-12
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G V T G GQLG + T K VT+L KIV V A HT + G+++T+GC
Sbjct: 261 GDVYTWGSNREGQLGYTSVDTQATPRK-VTSLKAKIVAVSAANKHTAVVSDCGEVFTWGC 319
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDS--HSAALLQNGDVYAWG 154
N EG LG TSN +P+ S H+ L +G+VY WG
Sbjct: 320 NKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 372
Score = 39.9 bits (89), Expect = 0.004
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 319 LTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSG 378
LT A G +++L E G S + + L K +SI+AG + AVT +G
Sbjct: 405 LTAIAAGMVHSLALAEDGAFFYWVSSDSNLRCQQLHSLHGKTVVSISAGKYWASAVTSTG 464
Query: 379 EVYSWGMGSEGK 390
EVY W G GK
Sbjct: 465 EVYMWD-GKNGK 475
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 344 SGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTG 394
SG + TLE I KL+ + ++ + S EV+SWG G+ +LGTG
Sbjct: 118 SGASFTLEDI-KLRTPVDL-VSGPVAQVIGEQQSSEVFSWGNGANYQLGTG 166
>At3g02300.1 68416.m00212 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 471
Score = 72.1 bits (169), Expect = 8e-13
Identities = 92/372 (24%), Positives = 149/372 (40%), Gaps = 41/372 (11%)
Query: 80 VDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDS 139
+D+ G HT A+ S G ++ +G N+ G LG T + + G
Sbjct: 64 LDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAF 123
Query: 140 HSAALLQNGDVYAWGSFRDSHGSMG---LVVRGREGKPCKEPVKIDIGEPAV----EIAS 192
+AA+ + R++ G++ L V G + + P PA +++
Sbjct: 124 CTAAIAEP---------RENDGTLSTSRLWVWG-QNQGSNLPRLFSGAFPATTAIRQVSC 173
Query: 193 GGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDAR--QGFSALL--VPARVTLRQAA 248
G H+V L+ G + G EQGQLGR + R ++ L P V + Q +
Sbjct: 174 GTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLS 233
Query: 249 ARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVG-DDHA 307
+H + DA ++ +GL + GQLG + P R VG D +
Sbjct: 234 C---GEYHTAALSDA--GEVYTWGLGSMGQLGHVSLQSGDKELIPR-----RVVGLDGVS 283
Query: 308 WSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKS--------GDAETLELIPKLQNK 359
VA G HT L+ G +YA G + G+LGLG +S G L +P L
Sbjct: 284 MKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIP 343
Query: 360 KCIS-IAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAG 418
+ +A G S++ G + WG S G+ +S P+ +++AG
Sbjct: 344 TDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAG 403
Query: 419 GQHTVLLVEETS 430
G H+ +L + S
Sbjct: 404 GGHSAVLTDAFS 415
Score = 63.3 bits (147), Expect = 4e-10
Identities = 81/321 (25%), Positives = 130/321 (40%), Gaps = 31/321 (9%)
Query: 89 TIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQ---------XXXXXXXXXXXXGDS 139
++++ + I+ +G N G GR EK PKQ G
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGR-NEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGRE 71
Query: 140 HSAALLQNGDVYAWGSFRDSHGSMGLVVRGRE-GKPCKEPVKI-DIGEPAVEIASGGDHL 197
H+AA+ +G ++AWG+ + +G +G G E G+ K P K+ + V+ S G
Sbjct: 72 HTAAVASDGSLFAWGA--NEYGQLG---DGTEVGR--KHPKKVKQLQSEFVKFVSCGAFC 124
Query: 198 VVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHA 257
G +L Q S R FS PA +RQ + A
Sbjct: 125 TAAIAEPRE-NDGTLSTSRLWVWGQNQGSNLPRL-FSGAF-PATTAIRQVSCGT-----A 176
Query: 258 TFVLDAQHARLFAFGLNNYGQL--GITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQ 315
V ++ L A+G N GQL G+T E + L + ++ G+
Sbjct: 177 HVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGE 236
Query: 316 HHTLTLAANGQIYALGRCEYGRLG-LGDKSGDAETL-ELIPKLQNKKCISIAAGTSNSFA 373
+HT L+ G++Y G G+LG + +SGD E + + L +A G ++ A
Sbjct: 237 YHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCA 296
Query: 374 VTDSGEVYSWGMGSEGKLGTG 394
++ G +Y+WG G G+LG G
Sbjct: 297 LSLEGALYAWGGGQAGQLGLG 317
Score = 53.2 bits (122), Expect = 4e-07
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 268 LFAFGLNNYGQLGITGEKRKTALFS--PTECDALRAVGDDHAWSAVALGQHHTLTLAANG 325
++ +G N GQ G +++ + P E A G + W ++ G+ HT +A++G
Sbjct: 22 IYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPA-GANSRWLDISCGREHTAAVASDG 80
Query: 326 QIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGM 385
++A G EYG+LG G + G + + +LQ++ ++ G + A+ + E + G
Sbjct: 81 SLFAWGANEYGQLGDGTEVGRKHP-KKVKQLQSEFVKFVSCGAFCTAAIAEPRE--NDGT 137
Query: 386 GSEGKLGT-GESEDLNEPTL--AAVDSRAPLR-VSAGGQHTVLLVEE 428
S +L G+++ N P L A + +R VS G H V L EE
Sbjct: 138 LSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEE 184
Score = 52.0 bits (119), Expect = 9e-07
Identities = 85/353 (24%), Positives = 129/353 (36%), Gaps = 38/353 (10%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALD---------S 94
G + G + GQLG G +V K + + V G T A+ S
Sbjct: 80 GSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLS 139
Query: 95 SGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWG 154
+ ++W +G N L R S T G +H AL + G + AWG
Sbjct: 140 TSRLWVWGQNQGSNLPRLFSGAFPATT--------AIRQVSCGTAHVVALSEEGLLQAWG 191
Query: 155 SFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPA-----VEIASGGDHLVVLTTSGGVFTL 209
G+ G + + E ++++ G H L+ +G V+T
Sbjct: 192 YNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTW 251
Query: 210 GCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAA--RVWAGHHATFVLDAQHAR 267
G G GQLG ++ +S ++ L+P RV + V G T L + A
Sbjct: 252 GLGSMGQLGHVSLQSGDKE--------LIPRRVVGLDGVSMKEVACGGVHTCALSLEGA- 302
Query: 268 LFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVG---DDHAWSAVALGQHHTLTLAAN 324
L+A+G GQLG+ + S LR V VA G HTL
Sbjct: 303 LYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMRE 362
Query: 325 GQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDS 377
G+I G YG+ +KS A + + +AAG +S +TD+
Sbjct: 363 GRICGWGYNSYGQ-AANEKSSYAWYPSPVDWCVG-QVRKLAAGGGHSAVLTDA 413
Score = 43.6 bits (98), Expect = 3e-04
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 22/227 (9%)
Query: 181 IDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALL-VP 239
+DIGE E+A V + T ++ G + GQ GR Q R +Q L P
Sbjct: 1 MDIGEIIGEVAPS----VSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCP 56
Query: 240 ARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGE--KRKTALFSPTECD 297
A R H A D LFA+G N YGQLG E ++ + +
Sbjct: 57 AGANSRWLDISCGREHTAAVASDGS---LFAWGANEYGQLGDGTEVGRKHPKKVKQLQSE 113
Query: 298 ALRAVG-DDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKL 356
++ V +A+A + + TL+ + +++ G+ + L T +
Sbjct: 114 FVKFVSCGAFCTAAIAEPRENDGTLSTS-RLWVWGQNQGSNLPRLFSGAFPATTAI---- 168
Query: 357 QNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGES-EDLNEP 402
++ GT++ A+++ G + +WG +G+LG G + E L P
Sbjct: 169 -----RQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAP 210
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 71.7 bits (168), Expect = 1e-12
Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 196 HLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTL----RQAAARV 251
H V ++T G V+T G G G+LG D G +A++ P +V R+ A
Sbjct: 197 HSVAISTHGEVYTWGFGRGGRLGH-----PEFDIHSGQAAVITPRQVISGLGSRRVKAVA 251
Query: 252 WAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAV 311
A HH V+ + ++ +G N GQLG T + +P + +L+A AV
Sbjct: 252 AAKHHT--VIATEGGDVYTWGSNREGQLGYTSVDTQA---TPRKVTSLKA-----KIVAV 301
Query: 312 ALGQHHTLTLAANGQIYALGRCEYGRLGLG-DKSGDAETLELIPKLQNKKCISIAAGTSN 370
+ HT ++ G+++ G + G+LG G S + L+ L+ K +IA+ +
Sbjct: 302 SAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYH 361
Query: 371 SFAVTDSGEVYSWGMGSEGKLGTGESEDLNEP--TLAAVDSRAPLR---VSAGGQHTVLL 425
+ + + GEVY+WG S +L + TL R PLR ++AG H++ L
Sbjct: 362 TLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLAL 421
Query: 426 VEE 428
E+
Sbjct: 422 AED 424
Score = 70.9 bits (166), Expect = 2e-12
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 46 VLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCND 105
V + G G QLG G V+ + + G I V A H++A+ + G+++T+G
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 214
Query: 106 EGALGRAT----SNEKDEGTPKQXXXXXXXX---XXXXGDSHSAALLQNGDVYAWGSFRD 158
G LG S + TP+Q H+ + GDVY WGS R+
Sbjct: 215 GGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNRE 274
Query: 159 SHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLG 218
G +G + P K + V +++ H V++ G VFT GC ++GQLG
Sbjct: 275 --GQLGYTSVDTQATPRKVT---SLKAKIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLG 329
Query: 219 RLAQRSAS 226
SAS
Sbjct: 330 YGTSNSAS 337
Score = 69.7 bits (163), Expect = 4e-12
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G V T G GQLG + T K VT+L KIV V A HT + G+++T+GC
Sbjct: 264 GDVYTWGSNREGQLGYTSVDTQATPRK-VTSLKAKIVAVSAANKHTAVVSDCGEVFTWGC 322
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDS--HSAALLQNGDVYAWG 154
N EG LG TSN +P+ S H+ L +G+VY WG
Sbjct: 323 NKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 63.3 bits (147), Expect = 4e-10
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 238 VPARV-TLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLG---ITGEKRKTALFSP 293
VP RV +L ++ + V + H ++ +G G+LG + A+ +P
Sbjct: 176 VPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITP 235
Query: 294 TECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELI 353
+ + +G AVA +HHT+ G +Y G G+LG A T +
Sbjct: 236 RQ--VISGLGSRRV-KAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQA-TPRKV 291
Query: 354 PKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVD---SR 410
L+ K ++++A ++ V+D GEV++WG EG+LG G S + + VD +
Sbjct: 292 TSLK-AKIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGK 350
Query: 411 APLRVSAGGQHTVLL 425
+++ HT++L
Sbjct: 351 VFTAIASSKYHTLVL 365
Score = 56.0 bits (129), Expect = 6e-08
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVET------TKFKYVTALGDKIVD-VQAGGMHTIALDSSG 96
G V T G G G+LG E + + T + ++ LG + V V A HT+ G
Sbjct: 205 GEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGG 264
Query: 97 KIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSF 156
++T+G N EG LG TS + K + H+A + G+V+ WG
Sbjct: 265 DVYTWGSNREGQLGY-TSVDTQATPRKVTSLKAKIVAVSAANKHTAVVSDCGEVFTWGCN 323
Query: 157 RDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLG 210
++ G +G V G+ IAS H +VL G V+T G
Sbjct: 324 KE--GQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 39.9 bits (89), Expect = 0.004
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 319 LTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSG 378
LT A G +++L E G S + + L K +SI+AG + AVT +G
Sbjct: 408 LTAIAAGMVHSLALAEDGAFFYWVSSDSNLRCQQLHSLHGKTVVSISAGKYWASAVTSTG 467
Query: 379 EVYSWGMGSEGK 390
EVY W G GK
Sbjct: 468 EVYMWD-GKNGK 478
>At5g11580.1 68418.m01350 UVB-resistance protein-related / regulator
of chromosome condensation (RCC1) family protein
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to rjs protein (GI:3414809)
[Mus musculus]; similar to HERC2 (GI:4079809) [Homo
sapiens];similar to UVB-resistance protein UVR8
(GI:10177674) {Arabidopsis thaliana}
Length = 553
Score = 67.7 bits (158), Expect = 2e-11
Identities = 98/385 (25%), Positives = 155/385 (40%), Gaps = 61/385 (15%)
Query: 75 LGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTP-------KQXXX 127
L KI+ + AG HTIAL G ++++G G LG T E DE P +
Sbjct: 14 LSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLG--TGKESDELVPVLVEFPNQAEGD 71
Query: 128 XXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPC-------KEPVK 180
G HS A+ +G V+ WG + +G +G PC +E
Sbjct: 72 RIRIVGVAAGAYHSLAVSDDGSVWCWGY--NIYGQLGFDGENSLA-PCLIKNLFERETSS 128
Query: 181 IDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQL---GRLAQRSASRDARQGFSALL 237
+ + E+ G D V +G + +L G L G + + + D R F+++
Sbjct: 129 SSLNDSGREV--GSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIP 186
Query: 238 VP-------ARVTLRQAA------ARVWAGH-HATFVLDAQHARLFAFGLNNYGQLGI-T 282
+P R L+ A A V G H D + L+++G N++GQLG+
Sbjct: 187 IPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDV--SVLYSWGNNHHGQLGLGD 244
Query: 283 GEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQ-------IYALGRCEY 335
GE R P + + +A G HHT L + + G E
Sbjct: 245 GESRA----RPQTVETFNQKSGLTVYD-IACGAHHTALLTYRKETPKGPSICWTFGFGEN 299
Query: 336 GRLG-LGDKSGD-AETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGT 393
G+LG +KS E + +P ++ +S+ G ++ V+ G V+SWGM + G
Sbjct: 300 GQLGHRSNKSSSLPEPVSDLP--EHAYLVSVDCGLFHTSVVSSEGYVWSWGM----ERGL 353
Query: 394 GESEDLNEPTLAAVDSRAPLRVSAG 418
G D+N + A D P ++S G
Sbjct: 354 GLCPDVNFTEVEAGDDSVPRKISGG 378
Score = 64.9 bits (151), Expect = 1e-10
Identities = 98/412 (23%), Positives = 159/412 (38%), Gaps = 68/412 (16%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYV---TALGDKI--VDVQAGGMHTIALDSSGKI 98
G V + G+G G+LG G++ E A GD+I V V AG H++A+ G +
Sbjct: 35 GCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSV 94
Query: 99 WTFGCNDEGALG-----------------RATSNEKDEGTPKQXXXXXXXXXXXXGDSHS 141
W +G N G LG R TS+ + ++ G S
Sbjct: 95 WCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMS 154
Query: 142 AALLQNGDVYAWGSF--RDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVV 199
A+ G ++ WG+ +DS L P P+ G +++A G +H+V
Sbjct: 155 LAIDNVGGLWMWGNVPPQDSEPDPRLSFTSI---PIPFPILDFHGRTVLKVACGDEHVVA 211
Query: 200 LTTSGGV-----------FTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAA 248
L G + ++ G GQLG S +R Q + +T+ A
Sbjct: 212 LVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARP--QTVETFNQKSGLTVYDIA 269
Query: 249 ARVWAGHHATFVLDAQHAR-----LFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVG 303
HH + + + FG GQLG K + P L
Sbjct: 270 C---GAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSL---PEPVSDL---- 319
Query: 304 DDHAWS-AVALGQHHTLTLAANGQIYA------LGRC---EYGRLGLGDKSGDAETLELI 353
+HA+ +V G HT +++ G +++ LG C + + GD S +
Sbjct: 320 PEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGS 379
Query: 354 PKLQNKKCISIAAGTSNSFAVTDSG-EVYSWGMGSEGKLGTGESEDLNEPTL 404
+ ++ + ++ G +++ V D G +++SWG G G LGTG D PTL
Sbjct: 380 SRFRDP--VQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTL 429
Score = 54.8 bits (126), Expect = 1e-07
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 352 LIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRA 411
LI + ++K IS+AAG +++ A+T G VYSWG G G+LGTG+ D P L ++A
Sbjct: 9 LISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQA 68
Query: 412 P------LRVSAGGQHTVLLVEETS 430
+ V+AG H++ + ++ S
Sbjct: 69 EGDRIRIVGVAAGAYHSLAVSDDGS 93
Score = 53.6 bits (123), Expect = 3e-07
Identities = 70/287 (24%), Positives = 111/287 (38%), Gaps = 42/287 (14%)
Query: 182 DIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPAR 241
D+ + +A+G H + LT G V++ G G G+LG + F R
Sbjct: 13 DLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDR 72
Query: 242 VTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTA-----LF----- 291
+ + AA +H+ V D ++ +G N YGQLG GE LF
Sbjct: 73 IRIVGVAA---GAYHSLAVSD--DGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETS 127
Query: 292 SPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAE-TL 350
S + D+ R VG D V G +L + G ++ +G + D D +
Sbjct: 128 SSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWM-----WGNVPPQDSEPDPRLSF 182
Query: 351 ELIP------KLQNKKCISIAAGTSNSFAVTDSGEV-----------YSWGMGSEGKLGT 393
IP + + +A G + A+ G++ YSWG G+LG
Sbjct: 183 TSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGL 242
Query: 394 GESEDLNEP-TLAAVDSRAPLRV---SAGGQHTVLLVEETSSQREPS 436
G+ E P T+ + ++ L V + G HT LL + + PS
Sbjct: 243 GDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPS 289
Score = 42.7 bits (96), Expect = 6e-04
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 301 AVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDA--ETLELIPKLQN 358
A GD+H + V G H +Y+ G +G+LGLGD A +T+E +
Sbjct: 203 ACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSG 262
Query: 359 KKCISIAAGTSNSFAVTDSGEV-------YSWGMGSEGKLG--TGESEDLNEPTLAAVDS 409
IA G ++ +T E +++G G G+LG + +S L EP +
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEH 322
Query: 410 RAPLRVSAGGQHTVLLVEE 428
+ V G HT ++ E
Sbjct: 323 AYLVSVDCGLFHTSVVSSE 341
>At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM
domain-containing protein contains Pfam profile: PF01593
Flavin containing amine oxidase
Length = 844
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 153 WGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCG 212
WG + S+GS V G G + + +G+ V A + T G F G
Sbjct: 640 WGQDKFSYGSYSYVAVGSSGDDY-DILAESVGDGRVFFAGEATNRQYPATMHGAFLSGMR 698
Query: 213 EQGQLGRLAQRSASRDA 229
E + R+A+R AS A
Sbjct: 699 EAANILRVARRRASSSA 715
>At3g55950.1 68416.m06217 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; similar to
cytokinin-regulated kinase 1 [Nicotiana tabacum]
gi|10998537|gb|AAG25966
Length = 814
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 186 PAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLA 221
P V I++G H L T+G + +G + GQL +A
Sbjct: 200 PMVTISAGKSHACGLNTTGNLICIGNNDSGQLNVIA 235
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.132 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,203,281
Number of Sequences: 28952
Number of extensions: 453938
Number of successful extensions: 1405
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 772
Number of HSP's gapped (non-prelim): 207
length of query: 506
length of database: 12,070,560
effective HSP length: 84
effective length of query: 422
effective length of database: 9,638,592
effective search space: 4067485824
effective search space used: 4067485824
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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