Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000072-TA|BGIBMGA000072-PA|IPR000408|Regulator of
chromosome condensation, RCC1, IPR009091|Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II
(506 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18907| Best HMM Match : RCC1 (HMM E-Value=0) 305 7e-83
SB_7970| Best HMM Match : RCC1 (HMM E-Value=0) 139 4e-33
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 1e-25
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 91 2e-18
SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16) 76 6e-14
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-13
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 74 2e-13
SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19) 73 7e-13
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-11
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 64 3e-10
SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041) 61 2e-09
SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072) 60 5e-09
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 59 7e-09
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 57 4e-08
SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14) 51 3e-06
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-05
SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08) 44 4e-04
SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.13
SB_34545| Best HMM Match : RCC1 (HMM E-Value=0.027) 35 0.18
SB_3599| Best HMM Match : CLN3 (HMM E-Value=1.2e-08) 31 2.9
SB_44425| Best HMM Match : SAM_1 (HMM E-Value=0.00024) 30 3.8
SB_59581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 8.8
>SB_18907| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 444
Score = 305 bits (748), Expect = 7e-83
Identities = 184/424 (43%), Positives = 250/424 (58%), Gaps = 25/424 (5%)
Query: 22 GPKNKKKRGAIQLEIPTAPKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL-GDKIV 80
G K K + + ++ T+ + G+ LT GQGDVGQLGLG D +E K L G IV
Sbjct: 27 GGKRAKDKTKEKQDVFTSSLESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIV 86
Query: 81 DVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNE-KDEGTPKQXXX--XXXXXXXXXG 137
V++GGMHT+AL GK++T+GCND+GALGR T++E ++E P G
Sbjct: 87 QVESGGMHTVALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAG 146
Query: 138 DSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHL 197
DSH+AAL G VYAWG++RD+ G +GL G + KP + + ++IASG DH
Sbjct: 147 DSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAV--ILTSESDRIIKIASGNDHT 204
Query: 198 VVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAA--RVWAGH 255
LTTSG +FTLGC EQGQLGR+ + ++R R+G + +L PA V ++ V+ G
Sbjct: 205 AALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGS 264
Query: 256 HATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVG----DDHAWSAV 311
ATFV+ + ++A+GLNNYGQLG TG+ + T F P + +L + D H +
Sbjct: 265 FATFVVAKTGSDVYAWGLNNYGQLG-TGDVQ-TWHF-PVKVKSLSQLNKSEKDKHI--TI 319
Query: 312 ALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNS 371
A GQHHT+ NG++YALGR +YGRLGLGD + + I L N+ +A G S
Sbjct: 320 ANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACGECVS 379
Query: 372 FAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAV-------DSRAPLRVSAGGQHTVL 424
FAV+D GE+YSWGMGS +LG G ED + T A V ++ L VSAGGQHTV+
Sbjct: 380 FAVSDKGELYSWGMGSCLQLGNGNDED-DVTTPAKVQGKNLNSETHRVLGVSAGGQHTVI 438
Query: 425 LVEE 428
L E
Sbjct: 439 LAAE 442
>SB_7970| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 651
Score = 139 bits (337), Expect = 4e-33
Identities = 106/390 (27%), Positives = 185/390 (47%), Gaps = 31/390 (7%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G V + G G G+LG G+ + K G ++V V AG H++AL + G++W++G
Sbjct: 95 GAVWSWGHGGQGRLGHGDAQHQLLPKKVEAFAGQRVVAVSAGYFHSLALTADGRVWSWGY 154
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSM 163
+G LG + + + G +HS A+ +G V++WG HG +
Sbjct: 155 GRDGRLGHGNTQHQLLPKKLEGLAGQRVVAVSAGIAHSLAITADGSVWSWG--WGGHGRL 212
Query: 164 GLVVRGREGKPCKEPVKID--IGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLA 221
G G E K P KI+ + V +++G H + LT G VFT G G G+LG
Sbjct: 213 G---HGEE-KTQLLPKKIEAFADQRVVAVSAGSGHSLALTADGAVFTWGFGAHGRLGHGD 268
Query: 222 QRSASRDARQGFSALLVPARVT--LRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQL 279
++ L+P ++ + Q A V AG + + A A + ++G + G+L
Sbjct: 269 EQHQ-----------LLPKKIEAFVGQRAVAVSAGPRHSLAITADGA-VMSWGHGHRGKL 316
Query: 280 GITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLG 339
G G+++ L + E A R V AV+ G H++ ++A+G +++ G ++G+LG
Sbjct: 317 G-HGDEQNQLLPNKVEALAGRRV------VAVSAGSDHSIAISADGAVWSWGDGDFGKLG 369
Query: 340 LGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESE-D 398
GD+ + ++ ++++AG +S A+ G V+SWG G G+LG G+ +
Sbjct: 370 HGDEQNQLLPTKK-EAFAGQRVVAVSAGEYHSLAIIADGAVWSWGFGYHGQLGHGDQQIQ 428
Query: 399 LNEPTLAAVDSRAPLRVSAGGQHTVLLVEE 428
L + A + VSAG H++ + +
Sbjct: 429 LLPKQIEAFAGLRVVAVSAGAAHSLAITAD 458
Score = 132 bits (319), Expect = 6e-31
Identities = 100/365 (27%), Positives = 169/365 (46%), Gaps = 31/365 (8%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G V++ G G G+LG G++ + K G ++V V AG H+IA+ + G +W++G
Sbjct: 303 GAVMSWGHGHRGKLGHGDEQNQLLPNKVEALAGRRVVAVSAGSDHSIAISADGAVWSWGD 362
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSM 163
D G LG + T K+ G+ HS A++ +G V++WG HG +
Sbjct: 363 GDFGKLGHGDEQNQLLPTKKEAFAGQRVVAVSAGEYHSLAIIADGAVWSWGF--GYHGQL 420
Query: 164 GLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQR 223
G + + P + ++ G V +++G H + +T G +++ G G+ G+LG
Sbjct: 421 GHGDQQIQLLP--KQIEAFAGLRVVAVSAGAAHSLAITADGALWSWGYGDSGRLGH---- 474
Query: 224 SASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITG 283
D + V A V A A H D ++++G G+LG
Sbjct: 475 ---GDEQDQLLPKKVEAFVGPHVVAVSAGAAHSLALTADGS---VWSWGWGASGRLGHGD 528
Query: 284 EKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDK 343
E+ + L E A + V AV+ G H+ L A+G +++ G YG+LG GD
Sbjct: 529 EQNQLLLPKKIEAFAGQRV------VAVSAGLRHSGALTADGALWSWGEGAYGQLGHGD- 581
Query: 344 SGDAETLELIPK----LQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDL 399
E +L+PK ++ ++++AG +S A++ G +WG G +G LG G EDL
Sbjct: 582 ----EQRQLLPKKVEAFAGQRVVAVSAGAYHSLAISADGAFLTWGQGEDGCLGHG--EDL 635
Query: 400 NEPTL 404
++ L
Sbjct: 636 SDQLL 640
Score = 66.5 bits (155), Expect = 5e-11
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 288 TALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDA 347
T L +PT + +G + A S A G H L L A+G +++ G GRLG GD
Sbjct: 61 TRLNTPTRLPS--PLGGERAVSMSA-GAAHCLALTADGAVWSWGHGGQGRLGHGDAQHQL 117
Query: 348 ETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESE-DLNEPTLAA 406
+ + ++ ++++AG +S A+T G V+SWG G +G+LG G ++ L L
Sbjct: 118 -LPKKVEAFAGQRVVAVSAGYFHSLALTADGRVWSWGYGRDGRLGHGNTQHQLLPKKLEG 176
Query: 407 VDSRAPLRVSAGGQHTVLLVEETS 430
+ + + VSAG H++ + + S
Sbjct: 177 LAGQRVVAVSAGIAHSLAITADGS 200
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 114 bits (275), Expect = 1e-25
Identities = 106/403 (26%), Positives = 167/403 (41%), Gaps = 29/403 (7%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G + G GQLG E + V + G A+ + GK++ G
Sbjct: 2380 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGY 2439
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXX--XGDSHSAALLQNGDVYAWGSFRDSHG 161
G LG ++ + G H+ AL +GDVY+WG D G
Sbjct: 2440 GHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDD--G 2497
Query: 162 SMGLVVRGREGKPCKEPVKIDI--GEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGR 219
+G G C P I+ G+ ++I+ GG H +T + ++T G G G+LG
Sbjct: 2498 KLG---HGNRNS-CDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGH 2553
Query: 220 LAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQL 279
D+ +V A R +G T L ++++G +YG+L
Sbjct: 2554 -------GDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDC-VWSWGDGDYGKL 2605
Query: 280 GITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLG 339
G G P + ++L +G S V G ++ L +G +Y G+ +Y RLG
Sbjct: 2606 GRGGSD---GCKIPMKVESLIGLGV----SKVECGSQFSVALTRSGAVYTWGKGDYYRLG 2658
Query: 340 LGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDL 399
G + + LQ KK I+IA G+ + A TD+GEVY+WG EG+LG G + +
Sbjct: 2659 HG-VDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAI 2717
Query: 400 NEPTL-AAVDSRAPLRVSAGGQHTVL--LVEETSSQREPSPIP 439
P L A+ + RV+ G HT+ + ++ R P +P
Sbjct: 2718 ARPRLVTALQGKKISRVACGSAHTIAWSTCKPVNAGRLPDEVP 2760
Score = 99 bits (238), Expect = 4e-21
Identities = 99/408 (24%), Positives = 174/408 (42%), Gaps = 39/408 (9%)
Query: 45 RVLTCGQGDVGQLG--LGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFG 102
+V G D QLG G + +++ AL K+ + G A+ GK++ G
Sbjct: 1435 KVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGAL--KVQQIAGGSKTLFAVSHDGKVFACG 1492
Query: 103 CNDEGALGRATSNEKDEGTPKQXXXXXXXX----XXXXGDSHSAALLQNGDVYAWGSFRD 158
+ G LG + + P+Q G H+ AL G +++WG D
Sbjct: 1493 ESTNGRLGLGPLSA-NVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGED 1551
Query: 159 SHGSMGLVVRGREGKPCKEPVKIDIGEPAV--EIASGGDHLVVLTTSGGVFTLGCGEQGQ 216
G +G G C P ID + + +++ G H + +SG ++T G GE G+
Sbjct: 1552 --GKLG---HGNRMN-CDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGR 1605
Query: 217 LGRLAQRSASRDAR-QGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNN 275
LG + + + Q F++ RV +R A + ++++G +
Sbjct: 1606 LGHGDNYTHLKPKKVQSFTS----HRVIDIACGSR-----DAQTLALTDDGTVWSWGDGD 1656
Query: 276 YGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEY 335
+G+LG G + + P + L+ G VA G +L L+ +G ++ G+ +Y
Sbjct: 1657 FGKLGRGGSEGCSV---PNPVEKLQGQGV----CKVACGAQFSLALSTSGLVWTWGKGDY 1709
Query: 336 GRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGE 395
RLG G+ + +++ L+ KK + +A G + AVTDSG+V++WG G+ G
Sbjct: 1710 YRLGHGNDT-HVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNT 1768
Query: 396 SEDLNEPTLA-AVDSRAPLRVSAGGQHTVLLVEE---TSSQREPSPIP 439
+ P L ++ + RV+ G H++ E T + EP P
Sbjct: 1769 TTVNRRPQLVNGLEGQKITRVACGSSHSIAWAESDLPTPATHEPVMFP 1816
Score = 97.9 bits (233), Expect = 2e-20
Identities = 90/339 (26%), Positives = 145/339 (42%), Gaps = 27/339 (7%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD---KIVDVQAGGMHTIALDSSGKIWT 100
G+V CG+ G+LGLG T + + L + V V +GG H +AL GK+++
Sbjct: 1486 GKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFS 1545
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSH 160
+G ++G LG D G SHSAA+L +G++Y WG +
Sbjct: 1546 WGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWG--LGEY 1603
Query: 161 GSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGG--DHLVVLTTSGGVFTLGCGEQGQLG 218
G +G KP K V+ ++IA G + LT G V++ G G+ G+LG
Sbjct: 1604 GRLGHGDNYTHLKPKK--VQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLG 1661
Query: 219 RLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQ 278
R S + P Q +V G + L ++ +G +Y +
Sbjct: 1662 RGGSEGCS---------VPNPVEKLQGQGVCKVACGAQFSLALSTS-GLVWTWGKGDYYR 1711
Query: 279 LGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRL 338
L G T + P D LR VA+G H L + +GQ++A G ++G+
Sbjct: 1712 L---GHGNDTHVRKPQIVDGLRG----KKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQ 1764
Query: 339 GLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDS 377
G + + +L+ L+ +K +A G+S+S A +S
Sbjct: 1765 GNNTTTVNRRP-QLVNGLEGQKITRVACGSSHSIAWAES 1802
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 35 EIPTAPKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALD 93
+ A + G V T G+GD +LG G D + K V AL G K++ + G +H +A
Sbjct: 2635 QFSVALTRSGAVYTWGKGDYYRLGHGVD-DHVRRPKRVAALQGKKVITIATGSLHCVAST 2693
Query: 94 SSGKIWTFGCNDEGALGRATSN 115
+G+++T+G NDEG LG T+N
Sbjct: 2694 DTGEVYTWGDNDEGQLGDGTTN 2715
Score = 49.2 bits (112), Expect = 8e-06
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 318 TLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDS 377
T+T +G IY G G+LG + + + I L + + + I G FAVT
Sbjct: 2373 TMTWGGSGTIYGWGHNHRGQLG-SLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAE 2431
Query: 378 GEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLR---VSAGGQHTVLL 425
G+VY+ G G G+LG G ++ + + +R V +GG+H + L
Sbjct: 2432 GKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMAL 2482
Score = 35.1 bits (77), Expect = 0.13
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 377 SGEVYSWGMGSEGKLGTGESEDLNEP-TLAAVDSRAPLRVSAGGQHTVLLV 426
SG +Y WG G+LG+ E + P T+ A+ S P+++ GG+ T+ V
Sbjct: 2379 SGTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQI-VGGEQTLFAV 2428
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 91.1 bits (216), Expect = 2e-18
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 30/272 (11%)
Query: 140 HSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKID--IGEPAVEIASGGDHL 197
H AL + G+VY+WGS G G + G + P +EP + G+ + I+ G H
Sbjct: 554 HFLALTREGEVYSWGS-----GDGGKLGHG-DTSPREEPTLVTGLAGKQVIRISCGSTHS 607
Query: 198 VVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVT-LR-QAAARVWAGH 255
+T+ G ++T G G G+LG +S D LVP V+ LR V G
Sbjct: 608 AAVTSEGELYTWGRGNYGRLGH----GSSEDQ-------LVPVLVSGLRGHHIIDVACGS 656
Query: 256 HATFVLDA-QHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALG 314
L A ++++G +YG+LG G +P + L+ +G V G
Sbjct: 657 GDAHTLAAADDGTVWSWGDGDYGKLGRGGSD---GCKNPKSIERLQGLGV----CKVYCG 709
Query: 315 QHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAV 374
+L L +G ++ G+ E RLG G + +L+ L K + ++ G+ + A+
Sbjct: 710 AQFSLALTRDGSVWTWGKGEGFRLGHGTED-HVRHPKLVEALDGKHVVDVSVGSIHCLAL 768
Query: 375 TDSGEVYSWGMGSEGKLGTGESEDLNEPTLAA 406
TD+GEVY WG +G+LG + + EPTL +
Sbjct: 769 TDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVS 800
Score = 76.2 bits (179), Expect = 6e-14
Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 31/306 (10%)
Query: 86 GMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALL 145
G H +AL G+++++G D G LG ++ ++E T G +HSAA+
Sbjct: 552 GKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVT 611
Query: 146 QNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASG-GD-HLVVLTTS 203
G++Y WG R ++G +G E + V G +++A G GD H +
Sbjct: 612 SEGELYTWG--RGNYGRLG--HGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADD 667
Query: 204 GGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQ--AAARVWAGHHATFVL 261
G V++ G G+ G+LG R G P + Q +V+ G + L
Sbjct: 668 GTVWSWGDGDYGKLG-----------RGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLAL 716
Query: 262 DAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTL 321
+ ++ +G +LG E + P +AL D V++G H L L
Sbjct: 717 -TRDGSVWTWGKGEGFRLGHGTEDH---VRHPKLVEAL----DGKHVVDVSVGSIHCLAL 768
Query: 322 AANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVY 381
G++Y GR + G+LG D E L+ L +K + IA G + SFA + +G+
Sbjct: 769 TDAGEVYCWGRNDQGQLGDIDCQIRPEP-TLVSGLASKGIVGIACGPAQSFAWSCAGQ-- 825
Query: 382 SWGMGS 387
W +G+
Sbjct: 826 -WSVGT 830
Score = 73.7 bits (173), Expect = 3e-13
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 39 APKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGG--MHTIALDSSG 96
A G + T G+G+ G+LG G + G I+DV G HT+A G
Sbjct: 609 AVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDG 668
Query: 97 KIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWG-- 154
+W++G D G LGR S+ + G S AL ++G V+ WG
Sbjct: 669 TVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKG 728
Query: 155 -SFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGE 213
FR HG+ V R K + +D G+ V+++ G H + LT +G V+ G +
Sbjct: 729 EGFRLGHGTEDHV---RHPKLVE---ALD-GKHVVDVSVGSIHCLALTDAGEVYCWGRND 781
Query: 214 QGQLG 218
QGQLG
Sbjct: 782 QGQLG 786
Score = 71.3 bits (167), Expect = 2e-12
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 42 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWT 100
+ G V + G GD G+LG G D + VT L G +++ + G H+ A+ S G+++T
Sbjct: 560 REGEVYSWGSGDGGKLGHG-DTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYT 618
Query: 101 FGCNDEGALGRATSNEKDEGTPKQXX----XXXXXXXXXXGDSHSAALLQNGDVYAWGSF 156
+G + G LG +S +D+ P GD+H+ A +G V++WG
Sbjct: 619 WGRGNYGRLGHGSS--EDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGD- 675
Query: 157 RDSHGSMGLVVRGREGKPCKEPVKID--IGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQ 214
+G +G G +G CK P I+ G ++ G + LT G V+T G GE
Sbjct: 676 -GDYGKLGR--GGSDG--CKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEG 730
Query: 215 GQLG 218
+LG
Sbjct: 731 FRLG 734
Score = 49.6 bits (113), Expect = 6e-06
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 44 GRVLTCGQGDVGQLGLG-EDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWTF 101
G V T G+G+ +LG G ED V K V AL G +VDV G +H +AL +G+++ +
Sbjct: 720 GSVWTWGKGEGFRLGHGTEDHVRHPKL--VEALDGKHVVDVSVGSIHCLALTDAGEVYCW 777
Query: 102 GCNDEGALGRATSNEKDEGT 121
G ND+G LG + E T
Sbjct: 778 GRNDQGQLGDIDCQIRPEPT 797
>SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16)
Length = 390
Score = 76.2 bits (179), Expect = 6e-14
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 22/252 (8%)
Query: 178 PVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALL 237
P+ + IA G H +V+T G +F+ G G GQLG + + + L
Sbjct: 115 PLLVGQDGQVTHIACGSSHTLVITGDGRLFSWGNGNSGQLG-IGSTNTTLQPH------L 167
Query: 238 VPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKR--KTALFSPTE 295
VP VT V G +FV + F+FG N QLG K K P
Sbjct: 168 VPLGVTPGTRIEGVACGTRHSFVW-TEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIY 226
Query: 296 CDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPK 355
D L + VA G H+L L +NG + A+G G++G+G+K+ D ++ +P
Sbjct: 227 VDTLF----NRKVLQVACGSRHSLFLFSNGHVAAVGCNNRGQIGIGNKT-DTFCIQNVPD 281
Query: 356 LQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRV 415
L +A G S+ A G+V++WG G EDL P + + ++
Sbjct: 282 LTG--VTVVACGNSHCLAADVQGQVWAWGYSK----ACGAREDLLSPENIFTSTDSCVKA 335
Query: 416 SAGG-QHTVLLV 426
+GG H+++L+
Sbjct: 336 LSGGDSHSMILL 347
Score = 55.2 bits (127), Expect = 1e-07
Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 21/262 (8%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDH 196
G SH+ + +G +++WG+ + G +G+ +P P+ + G +A G H
Sbjct: 130 GSSHTLVITGDGRLFSWGN--GNSGQLGIGSTNTTLQPHLVPLGVTPGTRIEGVACGTRH 187
Query: 197 LVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHH 256
V T G F+ G QLG ++ +D + + V R+ H
Sbjct: 188 SFVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQ--LKPIYVDTLFN-RKVLQVACGSRH 244
Query: 257 ATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQH 316
+ F+ H + A G NN GQ+GI G K T+ ++ V D + VA G
Sbjct: 245 SLFLFSNGH--VAAVGCNNRGQIGI-GNK--------TDTFCIQNVPDLTGVTVVACGNS 293
Query: 317 HTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTD 376
H L GQ++A G Y + G + D + E I + +++ G S+S +
Sbjct: 294 HCLAADVQGQVWAWG---YSK-ACGARE-DLLSPENIFTSTDSCVKALSGGDSHSMILLH 348
Query: 377 SGEVYSWGMGSEGKLGTGESED 398
+G + + G E G+ +D
Sbjct: 349 NGRLLTVGNNYEVSDNKGDLKD 370
Score = 47.6 bits (108), Expect = 2e-05
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 73 TALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXX 132
T K++ V G H++ L S+G + GCN+ G +G N+ D +
Sbjct: 229 TLFNRKVLQVACGSRHSLFLFSNGHVAAVGCNNRGQIG--IGNKTDTFCIQNVPDLTGVT 286
Query: 133 XXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIAS 192
G+SH A G V+AWG + + G+ RE E + + V+ S
Sbjct: 287 VVACGNSHCLAADVQGQVWAWG-YSKACGA-------REDLLSPENI-FTSTDSCVKALS 337
Query: 193 GGD-HLVVLTTSGGVFTLG 210
GGD H ++L +G + T+G
Sbjct: 338 GGDSHSMILLHNGRLLTVG 356
Score = 46.0 bits (104), Expect = 7e-05
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 357 QNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLR-- 414
Q+ + IA G+S++ +T G ++SWG G+ G+LG G + +P L + R
Sbjct: 120 QDGQVTHIACGSSHTLVITGDGRLFSWGNGNSGQLGIGSTNTTLQPHLVPLGVTPGTRIE 179
Query: 415 -VSAGGQHTVLLVEE 428
V+ G +H+ + EE
Sbjct: 180 GVACGTRHSFVWTEE 194
Score = 40.3 bits (90), Expect = 0.004
Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 17/176 (9%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL----GDKIVDVQAGGMHTIALDSSGKIW 99
GR+ + G G+ GQLG+G TT ++ L G +I V G H+ G+ +
Sbjct: 141 GRLFSWGNGNSGQLGIGS--TNTTLQPHLVPLGVTPGTRIEGVACGTRHSFVWTEEGECF 198
Query: 100 TFGCNDEGALG---RATSNEKDEGTP--KQXXXXXXXXXXXXGDSHSAALLQNGDVYAWG 154
+FG N LG R + ++ P G HS L NG V A G
Sbjct: 199 SFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGSRHSLFLFSNGHVAAVG 258
Query: 155 SFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLG 210
++ G +G + + C + V D+ V +A G H + G V+ G
Sbjct: 259 C--NNRGQIG--IGNKTDTFCIQNVP-DLTGVTV-VACGNSHCLAADVQGQVWAWG 308
Score = 39.5 bits (88), Expect = 0.006
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 103
G V G + GQ+G+G +T + V L V V G H +A D G++W +G
Sbjct: 252 GHVAAVGCNNRGQIGIGNKT-DTFCIQNVPDLTGVTV-VACGNSHCLAADVQGQVWAWGY 309
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXX--XXXXXGDSHSAALLQNGDVYAWGS 155
+ +A +D +P+ GDSHS LL NG + G+
Sbjct: 310 S------KACGAREDLLSPENIFTSTDSCVKALSGGDSHSMILLHNGRLLTVGN 357
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 74.5 bits (175), Expect = 2e-13
Identities = 44/95 (46%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 311 VALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSN 370
V GQ+ T + NG I A G YGRLG+G+ S D TL I LQ I IA +
Sbjct: 1458 VVCGQNCTFVVQVNGTILACGEGSYGRLGMGN-SDDLFTLSPISALQGYVVIQIATSRGS 1516
Query: 371 ---SFAVTDSGEVYSWGMGSEGKLGTGESEDLNEP 402
S A+TDSGEV+SWG G GKLG G S+ P
Sbjct: 1517 DGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRP 1551
Score = 66.9 bits (156), Expect = 4e-11
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 250 RVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWS 309
+V G + T VL A ++AFG +YG+LG+ KT SP D L +G
Sbjct: 1709 QVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKT---SPQAIDVLAGIG----CK 1761
Query: 310 AVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTS 369
+ G ++ L +G++++ G+ G G + + I L + + G
Sbjct: 1762 KICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQ-IQALASHFIDDVCVGAE 1820
Query: 370 NSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEP-TLAAVDSRAPLRVSAGGQHTVLLVEE 428
+ A+T +GEV+ WG +G+LG G S EP + + + ++SAG H+
Sbjct: 1821 HVLALTSTGEVWGWGSNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWTAP 1880
Query: 429 TSSQREP--SPIP 439
R P +P+P
Sbjct: 1881 PPPPRFPPGAPLP 1893
Score = 52.4 bits (120), Expect = 8e-07
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 50 GQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGAL 109
G GD G+LGLG +T+ G + G ++ L + G++++FG E
Sbjct: 1731 GDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFG--QERLT 1788
Query: 110 GRATSNEKDEGTPKQXXXXXXXXXXX--XGDSHSAALLQNGDVYAWGSFRDSHGSMGLVV 167
G+ + P+Q G H AL G+V+ WGS D G +GL
Sbjct: 1789 GQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGSNVD--GQLGLGH 1846
Query: 168 RGREGKPCKEPVKIDI-GEPAVEIASGGDHLVVLT 201
+ +PC P D+ G+ +I++G +H T
Sbjct: 1847 SNAQREPCVIP---DLKGKNIRQISAGRNHSAAWT 1878
Score = 49.2 bits (112), Expect = 8e-06
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 82 VQAGGMHTIALDSSGK-IWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSH 140
V G HT+ L + G +W FG D G LG + K G
Sbjct: 1710 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQF 1769
Query: 141 SAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVL 200
S L +G V+++G R + G + RG + KP + ++ ++ G +H++ L
Sbjct: 1770 SVVLTNDGRVFSFGQERLTGQPEGRL-RGPQ-KP--QQIQALASHFIDDVCVGAEHVLAL 1825
Query: 201 TTSGGVFTLGCGEQGQLGRLAQRSASRD 228
T++G V+ G GQLG L +A R+
Sbjct: 1826 TSTGEVWGWGSNVDGQLG-LGHSNAQRE 1852
Score = 43.2 bits (97), Expect = 5e-04
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDV---QAGGMHTIALDSSGKIWT 100
G +L CG+G G+LG+G T G ++ + + H++AL SG++++
Sbjct: 1472 GTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFS 1531
Query: 101 FGCNDEGALGRATSNEK 117
+G D G LG S+ +
Sbjct: 1532 WGDGDYGKLGHGNSDRQ 1548
Score = 32.7 bits (71), Expect = 0.72
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 107 GALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLV 166
G G+ + + P G + + + NG + A G S+G +G+
Sbjct: 1431 GRHGQLAESGRGVNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGE--GSYGRLGM- 1487
Query: 167 VRGREGKPCKEPVKIDIGEPAVEIAS--GGD-HLVVLTTSGGVFTLGCGEQGQLG 218
+ P+ G ++IA+ G D H + LT SG VF+ G G+ G+LG
Sbjct: 1488 -GNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLG 1541
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 74.1 bits (174), Expect = 2e-13
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 306 HAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIA 365
H S VALG HT+ L N +++A G +G+LG GD++ + +L P + K+ + IA
Sbjct: 36 HGISKVALGTAHTVLLTFNHEVFAFGDNNFGQLGFGDRNRRRDPAKL-PFFEGKRVVDIA 94
Query: 366 AGTSNSFAVTDSGEVYSWGMGSEGKLGTGESED 398
G +S + D+GE Y+WG S G+ G G+ ++
Sbjct: 95 CGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDN 127
Score = 56.4 bits (130), Expect = 5e-08
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 33/216 (15%)
Query: 242 VTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRA 301
++L ++V G T +L H +FAFG NN+GQLG R+ + R
Sbjct: 32 LSLPHGISKVALGTAHTVLLTFNH-EVFAFGDNNFGQLGFGDRNRRRDPAKLPFFEGKRV 90
Query: 302 VGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLG----DKSGDAETL------- 350
V +A G H++ L NG+ YA G G+ G+G + + DA T
Sbjct: 91 VD-------IACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEM 143
Query: 351 --------------ELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGES 396
E P+ + K SIA G ++ A++ G V++WG+G + G+ S
Sbjct: 144 KSPQSVFHLSEEKHETQPQATDVKIKSIACGDCHTLALSSRGTVWAWGLGCQTGHGSLNS 203
Query: 397 EDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEETSSQ 432
+ A+ + + + G H++ L+ + + +
Sbjct: 204 IVSRPKMVEALKDKEVIGIICGAYHSIALITDNTME 239
Score = 49.6 bits (113), Expect = 6e-06
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 6/127 (4%)
Query: 39 APKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKI 98
A KK G +C G+ G + K ++ L I V G HT+ L + ++
Sbjct: 2 AEKKEG---SCWDGEKGIAFFWQSTSPEPKISPLS-LPHGISKVALGTAHTVLLTFNHEV 57
Query: 99 WTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRD 158
+ FG N+ G LG N + + G HS LL NG+ YAWG
Sbjct: 58 FAFGDNNFGQLGFGDRNRRRDPAKLPFFEGKRVVDIACGGQHSVVLLDNGETYAWGD--S 115
Query: 159 SHGSMGL 165
S G G+
Sbjct: 116 SSGQCGI 122
Score = 48.0 bits (109), Expect = 2e-05
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDH 196
G +H+ L N +V+A+G ++ G +G R R P K P G+ V+IA GG H
Sbjct: 44 GTAHTVLLTFNHEVFAFGD--NNFGQLGFGDRNRRRDPAKLP--FFEGKRVVDIACGGQH 99
Query: 197 LVVLTTSGGVFTLGCGEQGQLG 218
VVL +G + G GQ G
Sbjct: 100 SVVLLDNGETYAWGDSSSGQCG 121
Score = 45.6 bits (103), Expect = 9e-05
Identities = 80/373 (21%), Positives = 145/373 (38%), Gaps = 48/373 (12%)
Query: 154 GSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGE 213
GS D + + +P P+ + G ++A G H V+LT + VF G
Sbjct: 7 GSCWDGEKGIAFFWQSTSPEPKISPLSLPHG--ISKVALGTAHTVLLTFNHEVFAFGDNN 64
Query: 214 QGQLGRLAQRSASRDARQGFSALLVPARVTL---RQAAARVWAGHHATFVLDAQHARLFA 270
GQLG R+ RD PA++ ++ G H+ +LD + +A
Sbjct: 65 FGQLG-FGDRNRRRD----------PAKLPFFEGKRVVDIACGGQHSVVLLD--NGETYA 111
Query: 271 FGLNNYGQLGITGEKRKTALFSPT------ECDALRAV-------------GDDHAWSAV 311
+G ++ GQ GI +A+ +PT E + ++V D ++
Sbjct: 112 WGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKSPQSVFHLSEEKHETQPQATDVKIKSI 171
Query: 312 ALGQHHTLTLAANGQIYALG-RCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSN 370
A G HTL L++ G ++A G C+ G G + +++ L++K+ I I G +
Sbjct: 172 ACGDCHTLALSSRGTVWAWGLGCQTGH---GSLNSIVSRPKMVEALKDKEVIGIICGAYH 228
Query: 371 SFA-VTDSG-EVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHT--VLLV 426
S A +TD+ E+ S + + + + + L + S+G + T LL
Sbjct: 229 SIALITDNTMEIKLLPHKSGNSVFMAKGKKITQKLLKKKKETLKRKKSSGSKITSPSLLQ 288
Query: 427 EETSSQREPSPIPXXXXXXXXXXXXXXXXXXXXXADITEQEGEITSTSAAKPEDVSNDTE 486
SS S P D + +G I++ + +S+ +
Sbjct: 289 SSDSSPNSTSSTPSINQQTSSGIRTYLSYHRGHKRD--DSQGSISADDSLDANTISDGST 346
Query: 487 PQKVNGDEKEPPM 499
++ D+ PP+
Sbjct: 347 VPSID-DKMGPPL 358
Score = 42.7 bits (96), Expect = 7e-04
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 31/151 (20%)
Query: 46 VLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFG--- 102
V G + GQLG G+ K G ++VD+ GG H++ L +G+ + +G
Sbjct: 57 VFAFGDNNFGQLGFGDRNRRRDPAKLPFFEGKRVVDIACGGQHSVVLLDNGETYAWGDSS 116
Query: 103 --------CNDEGALGRAT-----------------SNEKDEGTPKQXXXXXXXXXXXXG 137
C++ A+ T S EK E P+ G
Sbjct: 117 SGQCGIGKCDNNSAVDAPTKVAFTPEMKSPQSVFHLSEEKHETQPQ--ATDVKIKSIACG 174
Query: 138 DSHSAALLQNGDVYAWG-SFRDSHGSMGLVV 167
D H+ AL G V+AWG + HGS+ +V
Sbjct: 175 DCHTLALSSRGTVWAWGLGCQTGHGSLNSIV 205
>SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19)
Length = 637
Score = 72.5 bits (170), Expect = 7e-13
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 249 ARVWAGHHATFVLDAQHARLFAFGLNNYGQLGI---TGEKRKTALFSPTECDALRAVGDD 305
+++ AG + TFV+ + A G +YG+LG+ T + + L EC +++V
Sbjct: 333 SQIEAGQYCTFVIFPD-GFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNEC-LVKSVSSS 390
Query: 306 HAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIA 365
HTL L +G++Y+ G +YG+LG G+ + L NK IA
Sbjct: 391 KG------SDGHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIA 444
Query: 366 AGTSNSFAVTDSGEVYSWGMGSEGKLGTGES 396
AG +S AVT+ GE+Y+WG G G+LG+ S
Sbjct: 445 AGYRHSAAVTEDGELYTWGEGDYGRLGSCHS 475
Score = 70.9 bits (166), Expect = 2e-12
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 309 SAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNK---KCISIA 365
S + GQ+ T + +G ++A G+ YGRLGLGD + + L N+ K +S +
Sbjct: 333 SQIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRL--NFDNECLVKSVSSS 390
Query: 366 AGTS-NSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTL--AAVDSRAPLRVSAGGQHT 422
G+ ++ A+T G+VYSWG G GKLG G S+ P L A+ ++ ++AG +H+
Sbjct: 391 KGSDGHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHS 450
Query: 423 VLLVEE 428
+ E+
Sbjct: 451 AAVTED 456
Score = 68.9 bits (161), Expect = 9e-12
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 30/297 (10%)
Query: 144 LLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGD-HLVVLTT 202
+ +G V+A G + S+G +GL + + + + +V + G D H + LT
Sbjct: 345 IFPDGFVHACG--KGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTL 402
Query: 203 SGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLD 262
G V++ G G+ G+LG S ++ + L V A R H A D
Sbjct: 403 DGKVYSWGDGDYGKLGH--GNSQTQKIPKLVEGALGNKVVCCIAAGYR----HSAAVTED 456
Query: 263 AQHARLFAFGLNNYGQLG--------ITGEKRKTALFSPTECDALRAVGD------DHAW 308
+ L+ +G +YG+LG ++G + P + + VG
Sbjct: 457 GE---LYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQGMVI 513
Query: 309 SAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGT 368
V G +L L + GQ+Y G C LG G + T +L+ LQ+ + I+ G
Sbjct: 514 RKVCCGSQCSLALTSTGQVYVWG-CGPS-LGTGSVDATSATPKLLLALQSHSVVDISVGD 571
Query: 369 SNSFAVTDSGEVYSWGMGSEGKLGTGE-SEDLNEP-TLAAVDSRAPLRVSAGGQHTV 423
S+ A+T VY+WG S G+ G G + + +P + +D A ++SAG HTV
Sbjct: 572 SHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 628
Score = 60.1 bits (139), Expect = 4e-09
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 189 EIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAA 248
+I +G V+ G V G G G+LG + ++ R F + V+ + +
Sbjct: 334 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGS 393
Query: 249 ARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAW 308
GH LD +++++G +YG+LG G + + E A+G+
Sbjct: 394 D----GHTLALTLDG---KVYSWGDGDYGKLG-HGNSQTQKIPKLVE----GALGNKVV- 440
Query: 309 SAVALGQHHTLTLAANGQIYALGRCEYGRLGL-----------GDKSGD---------AE 348
+A G H+ + +G++Y G +YGRLG GD + A
Sbjct: 441 CCIAAGYRHSAAVTEDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVAN 500
Query: 349 TLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVD 408
++I LQ + G+ S A+T +G+VY WG G G+ ++ L A+
Sbjct: 501 VGQVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLLLALQ 560
Query: 409 SRAPLRVSAGGQHTVLLVEETS 430
S + + +S G H V L ++ +
Sbjct: 561 SHSVVDISVGDSHCVALTQDNN 582
Score = 57.6 bits (133), Expect = 2e-08
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 32/258 (12%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETT--KFKYVTALGDKIVDVQAGGM-HTIALDSSGKIWT 100
G V CG+G G+LGLG+ +T + + K V G HT+AL GK+++
Sbjct: 349 GFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYS 408
Query: 101 FGCNDEGALGRATS-NEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDS 159
+G D G LG S +K + G HSAA+ ++G++Y WG
Sbjct: 409 WGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYG 468
Query: 160 H-GSMGLVVRGREG----KPCKEPVKI----DIGE--PAVE------IASGGDHLVVLTT 202
GS + R G PV++ ++G+ A++ + G + LT+
Sbjct: 469 RLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQGMVIRKVCCGSQCSLALTS 528
Query: 203 SGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLD 262
+G V+ GCG LG + S DA LL+ + + + G L
Sbjct: 529 TGQVYVWGCGP--SLG-----TGSVDATSATPKLLLALQ---SHSVVDISVGDSHCVAL- 577
Query: 263 AQHARLFAFGLNNYGQLG 280
Q ++A+G N+ GQ G
Sbjct: 578 TQDNNVYAWGNNSMGQCG 595
Score = 51.2 bits (117), Expect = 2e-06
Identities = 65/302 (21%), Positives = 110/302 (36%), Gaps = 13/302 (4%)
Query: 82 VQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXX---XXXXXXXXGD 138
++AG T + G + G G LG S + + D
Sbjct: 335 IEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSD 394
Query: 139 SHSAALLQNGDVYAWGSFRDSHGSMGLVVRGR-EGKPCKEPVKIDIGEPAVE-IASGGDH 196
H+ AL +G VY+WG G G + G + + + V+ +G V IA+G H
Sbjct: 395 GHTLALTLDGKVYSWGD-----GDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRH 449
Query: 197 LVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHH 256
+T G ++T G G+ G+LG + ++ VP +V +V
Sbjct: 450 SAAVTEDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQ 509
Query: 257 ATFVLDAQHARLFAFGLNNYGQLGI--TGEKRKTALFSPTEC-DALRAVGDDHAWSAVAL 313
+ + L + GQ+ + G T T L H+ +++
Sbjct: 510 GMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLLLALQSHSVVDISV 569
Query: 314 GQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFA 373
G H + L + +YA G G+ G G + + + L I+AGTS++ A
Sbjct: 570 GDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVA 629
Query: 374 VT 375
T
Sbjct: 630 WT 631
Score = 50.8 bits (116), Expect = 3e-06
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 50 GQGDVGQLGLGEDVVETTKF-KYVTALGDKIV-DVQAGGMHTIALDSSGKIWTFGCNDEG 107
G GD + V + + + AL ++ V G ++AL S+G+++ +GC
Sbjct: 482 GHGDNNSRNVPVQVKDVANVGQVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSL 541
Query: 108 ALGRATSNEKDEGTPKQXXXXXXXXXX--XXGDSHSAALLQNGDVYAWGSFRDSHGSMGL 165
G S + TPK GDSH AL Q+ +VYAWG + SMG
Sbjct: 542 GTG---SVDATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWG-----NNSMGQ 593
Query: 166 VVRGREGKPCKEPVKIDIGEPAV---EIASGGDHLVVLT 201
+G P +P K+ +G V +I++G H V T
Sbjct: 594 CGQGHCTTPITKPKKV-LGLDGVAVHQISAGTSHTVAWT 631
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 68.5 bits (160), Expect = 1e-11
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 9/189 (4%)
Query: 242 VTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRA 301
V + + + G F+ + L+ G G+LG+ E+ L + ++ +++
Sbjct: 311 VVIGKVLVVITMGFGPRFIAFIEDGSLYMCGEKEGGKLGLDHEQ----LDNTSQLQKIKS 366
Query: 302 VGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKC 361
+ D A G T + NG +Y G+ G+LGLG + E E IP + K
Sbjct: 367 IEDQVV--VAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKA 424
Query: 362 ISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGE---SEDLNEPTLAAVDSRAPLRVSAG 418
+++ G S + +T G +Y++G G GKLG G+ S + ++ V+ G
Sbjct: 425 RTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 484
Query: 419 GQHTVLLVE 427
G H ++ E
Sbjct: 485 GCHMLVAAE 493
Score = 63.3 bits (147), Expect = 4e-10
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 305 DHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISI 364
D A ++ G H+ + +G +Y+ G G+LG GD D+ ++I L +K +
Sbjct: 34 DDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAE-DSHVPKIIEGLDVQKYKHL 92
Query: 365 AAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVL 424
A G+ S A+T++GE+Y+WG EG+ G GE ++ PT + + + VS G H +
Sbjct: 93 ACGSDFSAAITENGELYTWGSCGEGQNGLGEDTEI--PTRLHLHGKVRM-VSCGYYHMAV 149
Query: 425 LVEETSS 431
+ T S
Sbjct: 150 VTGLTCS 156
Score = 58.8 bits (136), Expect = 1e-08
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 44 GRVLTCGQGDVGQLGLG-EDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFG 102
G + CG+ + G+LGL E + T++ + + ++ D++V G T + +G ++TFG
Sbjct: 335 GSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFG 394
Query: 103 CNDEGALGRATSNEKDEGTPK-QXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHG 161
++G LG +S + E + G+S +A + ++G++Y +G R HG
Sbjct: 395 QGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGR--HG 452
Query: 162 SMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVV 199
+GL E VK + GG H++V
Sbjct: 453 KLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCHMLV 490
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 77 DKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPK--QXXXXXXXXXX 134
D +V++ G H+ + SG +++FGC +G LG + +D PK +
Sbjct: 35 DAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDA--EDSHVPKIIEGLDVQKYKHL 92
Query: 135 XXGDSHSAALLQNGDVYAWGSFRDSHGSMG 164
G SAA+ +NG++Y WGS + +G
Sbjct: 93 ACGSDFSAAITENGELYTWGSCGEGQNGLG 122
Score = 46.8 bits (106), Expect = 4e-05
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 35 EIPTAPKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIV--DVQAGGMHTIAL 92
E K G V T GQG+ GQLGLG ++E T+F L +K+ V G T +
Sbjct: 379 EFTAVVTKNGSVYTFGQGNQGQLGLGSSMME-TEFPERIPLFEKVKARTVSCGESFTAVI 437
Query: 93 DSSGKIWTFGCNDEGALG 110
G ++TFG G LG
Sbjct: 438 TKHGNLYTFGDGRHGKLG 455
Score = 46.4 bits (105), Expect = 5e-05
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 356 LQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEP-TLAAVDSRAPLR 414
+++ ++++ G +S VT+SG +YS+G G +G+LG G++ED + P + +D +
Sbjct: 32 IRDDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKH 91
Query: 415 VSAGGQHTVLLVE 427
++ G + + E
Sbjct: 92 LACGSDFSAAITE 104
Score = 46.4 bits (105), Expect = 5e-05
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 143 ALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTT 202
A +++G +Y G G +GL + + +K I + V A G + V+T
Sbjct: 330 AFIEDGSLYMCGE--KEGGKLGLDHEQLDNTSQLQKIK-SIEDQVVVAACGAEFTAVVTK 386
Query: 203 SGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTL--RQAAARVWAGHHATFV 260
+G V+T G G QGQLG + + P R+ L + A V G T V
Sbjct: 387 NGSVYTFGQGNQGQLGLGSSMMETE----------FPERIPLFEKVKARTVSCGESFTAV 436
Query: 261 LDAQHARLFAFGLNNYGQLGITGEKRKTALFSP 293
+ +H L+ FG +G+LG+ G++ + F P
Sbjct: 437 I-TKHGNLYTFGDGRHGKLGL-GDECFSNTFKP 467
Score = 38.7 bits (86), Expect = 0.011
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 256 HATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQ 315
H+ V ++ H L++FG GQLG G+ + + P + L D + +A G
Sbjct: 46 HSAVVTESGH--LYSFGCGGDGQLG-HGDAEDSHV--PKIIEGL----DVQKYKHLACGS 96
Query: 316 HHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKC 361
+ + NG++Y G C G+ GLG+ + L L K++ C
Sbjct: 97 DFSAAITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSC 142
Score = 37.1 bits (82), Expect = 0.033
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 185 EPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLG 218
+ V ++ G +H V+T SG +++ GCG GQLG
Sbjct: 35 DAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLG 68
Score = 33.5 bits (73), Expect = 0.41
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDH 196
GD HSA + ++G +Y++G D G + K +D+ + +A G D
Sbjct: 43 GDEHSAVVTESGHLYSFGCGGDGQLGHG---DAEDSHVPKIIEGLDV-QKYKHLACGSDF 98
Query: 197 LVVLTTSGGVFTLG-CGEQGQLG 218
+T +G ++T G CGE GQ G
Sbjct: 99 SAAITENGELYTWGSCGE-GQNG 120
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 64.1 bits (149), Expect = 3e-10
Identities = 80/337 (23%), Positives = 133/337 (39%), Gaps = 33/337 (9%)
Query: 62 DVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGT 121
D+ + F T + ++ +V G H + +T+G N G LG+ +D+ T
Sbjct: 69 DMATVSMFPIETPVRAQLGEVSVGQSHVAVVTLERAAYTWGDNSRGQLGQGDLVNRDKPT 128
Query: 122 PKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKI 181
GD +S + NG V GS G +G P + ++
Sbjct: 129 LVDTLKGKAITRACCGDKYSVFVTDNGIVMTCGS--SDTGCLG--HGDWSSTPRPKLIEG 184
Query: 182 DIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPAR 241
+ ++ G H+ V+ + G VFT G G G+LG + D + VP +
Sbjct: 185 LLSVDVTAVSCGPHHVAVVCSEGLVFTWGKGADGRLG-----LGNEDDQ------CVPCQ 233
Query: 242 VTLRQAAAR---VWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEK----------RKT 288
VT+ A V G T L A L A G N +LG+ + K
Sbjct: 234 VTMEDANVSIRDVRCGLDGTMFLTDTGA-LLACGSNANNKLGLNNRQGFLMQMKNLLNKD 292
Query: 289 ALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGD-KSGDA 347
+ T A++A+ + +ALG H+ L G ++ LG + G+LG G+ K DA
Sbjct: 293 PVKVTTTPTAVKAL-SRYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRDA 351
Query: 348 ETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWG 384
+ +L+++ + G + A T+ +Y WG
Sbjct: 352 PA--SVKQLEDQTVTMVFCGYGFTVAGTNDNTLYFWG 386
Score = 57.2 bits (132), Expect = 3e-08
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 174 PCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGF 233
P + PV+ +GE +V G H+ V+T +T G +GQLG+ +RD
Sbjct: 77 PIETPVRAQLGEVSV----GQSHVAVVTLERAAYTWGDNSRGQLGQ--GDLVNRD----- 125
Query: 234 SALLVPARVTLR-QAAARVWAGH-HATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALF 291
LV TL+ +A R G ++ FV D + + G ++ G LG G+ T
Sbjct: 126 KPTLVD---TLKGKAITRACCGDKYSVFVTD--NGIVMTCGSSDTGCLG-HGDWSSTP-- 177
Query: 292 SPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLE 351
P + L +V +AV+ G HH + + G ++ G+ GRLGLG++ +
Sbjct: 178 RPKLIEGLLSVDV----TAVSCGPHHVAVVCSEGLVFTWGKGADGRLGLGNEDDQCVPCQ 233
Query: 352 LIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLG 392
+ + N + G + +TD+G + + G + KLG
Sbjct: 234 VTMEDANVSIRDVRCGLDGTMFLTDTGALLACGSNANNKLG 274
Score = 56.4 bits (130), Expect = 5e-08
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 237 LVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTEC 296
+ P +R V G V+ + A + +G N+ GQLG + PT
Sbjct: 75 MFPIETPVRAQLGEVSVGQSHVAVVTLERAA-YTWGDNSRGQLGQGDLVNRD---KPTLV 130
Query: 297 DALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKL 356
D L+ A + G +++ + NG + G + G LG GD S +LI L
Sbjct: 131 DTLKG----KAITRACCGDKYSVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRP-KLIEGL 185
Query: 357 QNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAV-DSRAPLR- 414
+ +++ G + V G V++WG G++G+LG G +D P + D+ +R
Sbjct: 186 LSVDVTAVSCGPHHVAVVCSEGLVFTWGKGADGRLGLGNEDDQCVPCQVTMEDANVSIRD 245
Query: 415 VSAGGQHTVLLVE 427
V G T+ L +
Sbjct: 246 VRCGLDGTMFLTD 258
Score = 54.8 bits (126), Expect = 2e-07
Identities = 57/193 (29%), Positives = 80/193 (41%), Gaps = 23/193 (11%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTA-LGDKIVDVQAGGMHTIALDSSGKIWTFG 102
G V+TCG D G LG G D T + K + L + V G H + S G ++T+G
Sbjct: 155 GIVMTCGSSDTGCLGHG-DWSSTPRPKLIEGLLSVDVTAVSCGPHHVAVVCSEGLVFTWG 213
Query: 103 CNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXX---GDSHSAALLQNGDVYAWGSFRDS 159
+G LG NE D+ P Q G + L G + A GS ++
Sbjct: 214 KGADGRLG--LGNEDDQCVPCQVTMEDANVSIRDVRCGLDGTMFLTDTGALLACGS--NA 269
Query: 160 HGSMGL-----VVRGREGKPCKEPVKIDIGEPA---------VEIASGGDHLVVLTTSGG 205
+ +GL + + K+PVK+ A V++A G H VL G
Sbjct: 270 NNKLGLNNRQGFLMQMKNLLNKDPVKVTTTPTAVKALSRYRVVDMALGPTHSAVLVEPGH 329
Query: 206 VFTLGCGEQGQLG 218
V TLG + GQLG
Sbjct: 330 VHTLGSNQDGQLG 342
Score = 50.4 bits (115), Expect = 3e-06
Identities = 65/281 (23%), Positives = 105/281 (37%), Gaps = 35/281 (12%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDH 196
G SH A + Y WG +S G +G KP V G+ G +
Sbjct: 92 GQSHVAVVTLERAAYTWGD--NSRGQLGQGDLVNRDKPTL--VDTLKGKAITRACCGDKY 147
Query: 197 LVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHH 256
V +T +G V T G + G LG S R L+ +++ A HH
Sbjct: 148 SVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRPK-------LIEGLLSVDVTAVSC-GPHH 199
Query: 257 ATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQH 316
V +F +G G+LG+ E + T DA ++ D V G
Sbjct: 200 VAVV--CSEGLVFTWGKGADGRLGLGNEDDQCVPCQVTMEDANVSIRD------VRCGLD 251
Query: 317 HTLTLAANGQIYALGRCEYGRLGLGDKSGD---------------AETLELIPKLQNKKC 361
T+ L G + A G +LGL ++ G T + L +
Sbjct: 252 GTMFLTDTGALLACGSNANNKLGLNNRQGFLMQMKNLLNKDPVKVTTTPTAVKALSRYRV 311
Query: 362 ISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEP 402
+ +A G ++S + + G V++ G +G+LG+G ++ + P
Sbjct: 312 VDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRDAP 352
Score = 39.1 bits (87), Expect = 0.008
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Query: 59 LGEDVVE-TTKFKYVTALGD-KIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNE 116
L +D V+ TT V AL ++VD+ G H+ L G + T G N +G LG +
Sbjct: 289 LNKDPVKVTTTPTAVKALSRYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKP 348
Query: 117 KDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGS 155
+D + G + A + +Y WGS
Sbjct: 349 RDAPASVKQLEDQTVTMVFCGYGFTVAGTNDNTLYFWGS 387
>SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041)
Length = 234
Score = 61.3 bits (142), Expect = 2e-09
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 311 VALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSN 370
V G +L L + GQ+Y G C LG G + T +L+ LQ+ + I+ G S+
Sbjct: 13 VCCGSQCSLALTSTGQVYVWG-CGPS-LGTGSVDATSATPKLLLALQSHSVVDISVGDSH 70
Query: 371 SFAVTDSGEVYSWGMGSEGKLGTGE-SEDLNEP-TLAAVDSRAPLRVSAGGQHTV 423
A+T VY+WG S G+ G G + + +P + +D A ++SAG HTV
Sbjct: 71 CVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 125
Score = 50.4 bits (115), Expect = 3e-06
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 76 GDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXX- 134
G I V G ++AL S+G+++ +GC G S + TPK
Sbjct: 7 GMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTG---SVDATSATPKLLLALQSHSVVD 63
Query: 135 -XXGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAV---EI 190
GDSH AL Q+ +VYAWG + SMG +G P +P K+ +G V +I
Sbjct: 64 ISVGDSHCVALTQDNNVYAWG-----NNSMGQCGQGHCTTPITKPKKV-LGLDGVAVHQI 117
Query: 191 ASGGDHLVVLT 201
++G H V T
Sbjct: 118 SAGTSHTVAWT 128
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 352 LIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRA 411
+I LQ + G+ S A+T +G+VY WG G G+ ++ L A+ S +
Sbjct: 1 VIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLLLALQSHS 60
Query: 412 PLRVSAGGQHTVLLVEETS 430
+ +S G H V L ++ +
Sbjct: 61 VVDISVGDSHCVALTQDNN 79
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 44 GRVLTCGQGDVGQLGLGE-DVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFG 102
G+V G G LG G D T + +VD+ G H +AL ++ +G
Sbjct: 27 GQVYVWGCGP--SLGTGSVDATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWG 84
Query: 103 CNDEGALGR 111
N G G+
Sbjct: 85 NNSMGQCGQ 93
>SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072)
Length = 677
Score = 59.7 bits (138), Expect = 5e-09
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 297 DALRAVGDDHAWSAVALGQHHTLTLA-ANGQIYALGRCEYGRLGLGDKSGDAETLELIPK 355
D + G + L H L+ A G + L C G LG GD + + +
Sbjct: 6 DLIEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRDG-LGQGDTQQHTRPV-YVTE 63
Query: 356 LQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPT-LAAVDSRAPLR 414
L +KKCI++ G +S A++ +VYSWG G G+LG ED P+ + ++ +
Sbjct: 64 LSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQ 123
Query: 415 VSAGGQHTVLLVEE 428
++AG HT +L E
Sbjct: 124 LAAGYSHTAVLTTE 137
Score = 30.3 bits (65), Expect = 3.8
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDH 196
G HS AL + VY+WG HG +GL E V G ++A+G H
Sbjct: 75 GHYHSLALSADQQVYSWG--WGVHGQLGL--DSIEDALLPSHVTSLSGAFVTQLAAGYSH 130
Query: 197 LVVLTT 202
VLTT
Sbjct: 131 TAVLTT 136
Score = 29.5 bits (63), Expect = 6.7
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 79 IVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEK 117
+ G ++A+D++G++W +G +D G N+K
Sbjct: 309 VATASVGAEFSVAMDATGQVWVWGRSDSGQQNIYKYNDK 347
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 59.3 bits (137), Expect = 7e-09
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 268 LFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQI 327
LF+FG N+YGQLGI +K T+ +C + + +H S VA G H+ LA G++
Sbjct: 243 LFSFGENDYGQLGIPEDKLLTSYI---QCVSSLS---EHKISRVACGSFHSAALAEKGRM 296
Query: 328 YALGRCEYGRLG--LGDKSGDAETLELIPKLQ---NKKCISIAAGTSNSFAVTD 376
+ G YG+LG L D D T + +++ + +C+ +A G S++ VT+
Sbjct: 297 FCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTE 350
Score = 49.6 bits (113), Expect = 6e-06
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 44 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIALDSSGKIWTFG 102
G + + G+ D GQLG+ ED + T+ + V++L + KI V G H+ AL G+++ G
Sbjct: 241 GALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEKGRMFCCG 300
Query: 103 CNDEGALGRATSNEKDE 119
N G LG ++ +D+
Sbjct: 301 DNTYGQLGAHLNDNQDD 317
Score = 46.4 bits (105), Expect = 5e-05
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 315 QHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAV 374
Q T + G +++ G +YG+LG+ + ++ + L K +A G+ +S A+
Sbjct: 231 QDQTDSGTVEGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAAL 290
Query: 375 TDSGEVYSWGMGSEGKLGT--GESEDLNEPTLAAVDSRAP-----LRVSAGGQHTVLLVE 427
+ G ++ G + G+LG +++D + AV R P + V+ G HT ++ E
Sbjct: 291 AEKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTE 350
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 56.8 bits (131), Expect = 4e-08
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 183 IGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARV 242
+G +I+ G H++ +T VF G G+ G+LG + S+ A+ +P +
Sbjct: 471 LGFEVEDISCGSSHIMAVTADHEVFAWGRGDNGRLG-----TGSQQEYWSPKAISLPEGM 525
Query: 243 TLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEK---RKTALFSPTECDAL 299
R V G +F + ++ +L A G N +L + E + A+
Sbjct: 526 RARS----VHCGVDCSFAITLEN-KLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDF 580
Query: 300 RAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNK 359
+VG S+VA+G HTL L NG++Y+ G +G+LG + G + +L+ L +
Sbjct: 581 NSVGT----SSVAMGTSHTLVLLQNGKLYSFGSNSFGQLGY-VREGVSRFPQLVESLNDV 635
Query: 360 KCISIAAGTSNSFAVT 375
+A G + S AV+
Sbjct: 636 S--YVACGDTFSVAVS 649
Score = 51.2 bits (117), Expect = 2e-06
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 8/193 (4%)
Query: 92 LDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVY 151
L G + TFG G LG T+N + + G SH A+ + +V+
Sbjct: 436 LTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIMAVTADHEVF 495
Query: 152 AWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGC 211
AWG R +G +G + P + + + G A + G D +T + G
Sbjct: 496 AWG--RGDNGRLGTGSQQEYWSP--KAISLPEGMRARSVHCGVDCSFAITLENKLLACGS 551
Query: 212 GEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAF 271
+L L + + VP ++ ++ + H T VL Q+ +L++F
Sbjct: 552 NRCNKLA-LDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSH--TLVL-LQNGKLYSF 607
Query: 272 GLNNYGQLGITGE 284
G N++GQLG E
Sbjct: 608 GSNSFGQLGYVRE 620
Score = 48.4 bits (110), Expect = 1e-05
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 315 QHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAV 374
+H L G + G YG LG G + ++ +++ L + I+ G+S+ AV
Sbjct: 430 EHLDDLLTDRGILMTFGSGTYGCLGHGTTNYVSQA-KIVEDLLGFEVEDISCGSSHIMAV 488
Query: 375 TDSGEVYSWGMGSEGKLGTGESEDLNEP 402
T EV++WG G G+LGTG ++ P
Sbjct: 489 TADHEVFAWGRGDNGRLGTGSQQEYWSP 516
Score = 41.9 bits (94), Expect = 0.001
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 254 GHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVAL 313
G + A H +FA+G + G+LG TG +++ +SP ++ + +V
Sbjct: 481 GSSHIMAVTADH-EVFAWGRGDNGRLG-TGSQQE--YWSPKAI----SLPEGMRARSVHC 532
Query: 314 GQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLEL-----IPKLQNKKCISIAAGT 368
G + + ++ A G +L L ++ G E + + +P + S+A GT
Sbjct: 533 GVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGT 592
Query: 369 SNSFAVTDSGEVYSWGMGSEGKLG 392
S++ + +G++YS+G S G+LG
Sbjct: 593 SHTLVLLQNGKLYSFGSNSFGQLG 616
Score = 36.3 bits (80), Expect = 0.058
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 8/130 (6%)
Query: 46 VLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCN- 104
V G+GD G+LG G + G + V G + A+ K+ G N
Sbjct: 494 VFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLENKLLACGSNR 553
Query: 105 -DEGALGRATSNEKDEGTPKQXXX----XXXXXXXXXGDSHSAALLQNGDVYAWGSFRDS 159
++ AL ++ +Q G SH+ LLQNG +Y++GS +S
Sbjct: 554 CNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLVLLQNGKLYSFGS--NS 611
Query: 160 HGSMGLVVRG 169
G +G V G
Sbjct: 612 FGQLGYVREG 621
Score = 33.1 bits (72), Expect = 0.54
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 45 RVLTCGQGDVGQLGL-GED--VVETTKFKYVTALGDKIV---DVQAGGMHTIALDSSGKI 98
++L CG +L L ED V E + V+ V V G HT+ L +GK+
Sbjct: 545 KLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLVLLQNGKL 604
Query: 99 WTFGCNDEGALG 110
++FG N G LG
Sbjct: 605 YSFGSNSFGQLG 616
>SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14)
Length = 350
Score = 50.8 bits (116), Expect = 3e-06
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 188 VEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQA 247
V+ + G H ++LT +G VF G + GQ+G+ Q+ S ++ P +
Sbjct: 31 VQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPL---QIMHPTD----KK 83
Query: 248 AARVWAGHHATFVLDAQHARLFAFGLNNYGQLG--------ITGEK---------RKTAL 290
+V G + +LD ++ +F+FG YGQLG ++ K R+ +
Sbjct: 84 VTKVCCGAEFSMLLD-ENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVV 142
Query: 291 FSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETL 350
F D + V G +HT+ L G+++ G YGRLG + D
Sbjct: 143 FVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLG-HQQPKDEHVP 201
Query: 351 ELIPKLQNKKCIS-IAAGTSNSFAVTDSGEVYSWG 384
L+ K S I AG++ S AV G++Y WG
Sbjct: 202 RLLTFFNTKGNPSVIFAGSTYSMAVC-MGQLYFWG 235
Score = 50.4 bits (115), Expect = 3e-06
Identities = 76/355 (21%), Positives = 136/355 (38%), Gaps = 49/355 (13%)
Query: 104 NDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSHSAALLQNGDVYAWGSFRDSHGSM 163
ND+G LG T+ D G H+ L G V+ +G +
Sbjct: 3 NDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFGFGD-----NKL 57
Query: 164 GLVVRGREGKPCKEPVKIDIGEPA----VEIASGGDHLVVLTTSGGVFTLGCGEQGQLGR 219
G + +G + KP P + I P ++ G + ++L +G +F+ G E GQLG
Sbjct: 58 GQIGQGHQ-KPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGH 116
Query: 220 LAQ-RSASRDARQGFSALLVPARVTLRQAAAR--------------VWAGHHATFVLDAQ 264
+ + GF ++P R+ + + V G++ T LD Q
Sbjct: 117 NTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQ 176
Query: 265 HARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAAN 324
R+F +G YG+LG K + P G+ S + G +++ +
Sbjct: 177 -GRVFTWGFGGYGRLGHQQPKDEHV---PRLLTFFNTKGNP---SVIFAGSTYSMAVCM- 228
Query: 325 GQIYALGRCEYGRLGLGDKSGDAETL-ELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSW 383
GQ+Y G+ + +SG+A + + L + S+ S S + V SW
Sbjct: 229 GQLYFWGQTK--------QSGEAAMYPKPVQDLSGWQVRSVGCSKS-SIVIAADDSVVSW 279
Query: 384 GMG-SEGKLG-----TGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEETSSQ 432
G + G+LG G+ N + ++ V+ G HT+ + ++ + +
Sbjct: 280 GPSPTYGELGYGLKKGGQKSSTNPKIVEPLEDIYVHSVTCGMGHTLFIAKDVTPE 334
Score = 48.4 bits (110), Expect = 1e-05
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 64 VETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTP 122
VE K +V + G KI DV G HT+ALD G+++T+G G LG KDE P
Sbjct: 144 VERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGH--QQPKDEHVP 201
Query: 123 KQXXXXXXX---XXXXXGDSHSAALLQNGDVYAWGSFRDS 159
+ G ++S A+ G +Y WG + S
Sbjct: 202 RLLTFFNTKGNPSVIFAGSTYSMAVCM-GQLYFWGQTKQS 240
Score = 41.5 bits (93), Expect = 0.002
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 28/193 (14%)
Query: 51 QGDVGQLGLGEDVVETTKFKYVTALG-DKIVDVQAGGMHTIALDSSGKIWTFGCNDEGAL 109
+ D GQLG G K + L IV G HT+ L +G ++ FG N G +
Sbjct: 2 RNDKGQLGHGT-TERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQI 60
Query: 110 GRATSNEKDEGTPKQXXXXXXXXXXXX--GDSHSAALLQNGDVYAWGSFRDSHGSMG--- 164
G+ P Q G S L +NGD++++GS +G +G
Sbjct: 61 GQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSFGS--PEYGQLGHNT 118
Query: 165 ----LVVRGREGKPCKE-PVKIDI--------------GEPAVEIASGGDHLVVLTTSGG 205
+V + G C+ P ++ + G ++ G +H + L G
Sbjct: 119 DGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGR 178
Query: 206 VFTLGCGEQGQLG 218
VFT G G G+LG
Sbjct: 179 VFTWGFGGYGRLG 191
Score = 33.9 bits (74), Expect = 0.31
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 332 RCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKL 391
R + G+LG G + ++I +L+ + + G ++ +TD+G V+ +G G++
Sbjct: 2 RNDKGQLGHGTTER-CDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQI 60
Query: 392 GTGESEDLNEPTLAAV---DSRAPLRVSAGGQHTVLLVE 427
G G + + P + + +V G + ++LL E
Sbjct: 61 GQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLDE 99
>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 48.8 bits (111), Expect = 1e-05
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Query: 324 NGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGT--------------- 368
NG+++ G Y +LG G+ + L+ Q K +A G+
Sbjct: 112 NGEVFTWGHNGYSQLGNGNTNQGLYP-SLLTSFQGKNITQLACGSHHTLVLNDEGEILCG 170
Query: 369 -SNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSA 417
++S A++D+G +YSWG S G+LGTG L PT AVD + + A
Sbjct: 171 YAHSLALSDAGCIYSWGANSYGQLGTGNKAHLVTPTKIAVDKGRFVEIGA 220
Score = 41.5 bits (93), Expect = 0.002
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 264 QHARLFAFGLNNYGQLGI--TGEKRKTALFSPTECDALR--AVGDDHAW-----SAVALG 314
++ +F +G N Y QLG T + +L + + + A G H + G
Sbjct: 111 ENGEVFTWGHNGYSQLGNGNTNQGLYPSLLTSFQGKNITQLACGSHHTLVLNDEGEILCG 170
Query: 315 QHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAG--TSNSF 372
H+L L+ G IY+ G YG+LG G+K+ ++ + + + I A S
Sbjct: 171 YAHSLALSDAGCIYSWGANSYGQLGTGNKAHLVTPTKI--AVDKGRFVEIGASHYIHMSA 228
Query: 373 AVTDSGEVYSWG 384
A T +G+VY WG
Sbjct: 229 AATATGKVYMWG 240
Score = 37.5 bits (83), Expect = 0.025
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 81 DVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQXXXXXXXXXXXXGDSH 140
++ G H++AL +G I+++G N G LG T N+ TP + G SH
Sbjct: 166 EILCGYAHSLALSDAGCIYSWGANSYGQLG--TGNKAHLVTPTK-IAVDKGRFVEIGASH 222
Query: 141 ----SAALLQNGDVYAWG 154
SAA G VY WG
Sbjct: 223 YIHMSAAATATGKVYMWG 240
Score = 33.9 bits (74), Expect = 0.31
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 376 DSGEVYSWGMGSEGKLGTGE-SEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEE 428
++GEV++WG +LG G ++ L L + + +++ G HT++L +E
Sbjct: 111 ENGEVFTWGHNGYSQLGNGNTNQGLYPSLLTSFQGKNITQLACGSHHTLVLNDE 164
Score = 30.7 bits (66), Expect = 2.9
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 137 GDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEI-ASGGD 195
G +HS AL G +Y+WG+ +S+G +G + P K + +D G VEI AS
Sbjct: 170 GYAHSLALSDAGCIYSWGA--NSYGQLGTGNKAHLVTPTK--IAVDKGR-FVEIGASHYI 224
Query: 196 HL-VVLTTSGGVFTLG 210
H+ T +G V+ G
Sbjct: 225 HMSAAATATGKVYMWG 240
>SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08)
Length = 970
Score = 43.6 bits (98), Expect = 4e-04
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 28/205 (13%)
Query: 245 RQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGD 304
RQ ++ + HA DA A +G + G LGI + P E + V
Sbjct: 50 RQISSFSMSRTHAAVATDAGKA--LTWGYSPQGALGIE-HLASLIVPLPVEVTLEKTVLQ 106
Query: 305 D---HAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKC 361
++ A+ GQH+ + +G +YA G + D++ +T ++ + N +
Sbjct: 107 IETLYSIKAIGAGQHYACAIMTSGWMYAWGLSGAAK----DETKFVKTPTVVKGVDNARV 162
Query: 362 ISIAAGTSNSFAVTD---------SGEVYSWGMGSEGKLGTGESEDLNEPTLA------- 405
+S+A G ++ + + SG YSWG G G LG G L P+
Sbjct: 163 MSMACGAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHGTLLSLARPSYVKRLYHGD 222
Query: 406 --AVDSRAPLRVSAGGQHTVLLVEE 428
D++ +V+AG H+ L ++
Sbjct: 223 KDGKDAKTVSQVAAGRAHSAFLTKD 247
Score = 38.7 bits (86), Expect = 0.011
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 188 VEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSA 225
V+IA G H+ LT SG + T G G+ GQLG RS+
Sbjct: 494 VQIACGAFHVAALTDSGELLTCGTGKHGQLGHTHMRSS 531
Score = 35.9 bits (79), Expect = 0.077
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
Query: 196 HLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGH 255
H V T +G T G QG LG + AS + +P VTL + ++ +
Sbjct: 61 HAAVATDAGKALTWGYSPQGALG--IEHLASL-------IVPLPVEVTLEKTVLQIETLY 111
Query: 256 HATFVLDAQHARLFAFGLNNYGQL---GITGEKRKTALFSPTECDALRAVGDDHAWSAVA 312
+ QH +A + G + G++G + F T ++ V + S +A
Sbjct: 112 SIKAIGAGQH---YACAIMTSGWMYAWGLSGAAKDETKFVKTPT-VVKGVDNARVMS-MA 166
Query: 313 LGQHHTLTLA---------ANGQIYALGRCEYGRLGLGDKSGDAETLELIPKL------- 356
G +HT+ LA ++G Y+ GR G LG G A + +L
Sbjct: 167 CGAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHGTLLSLARP-SYVKRLYHGDKDG 225
Query: 357 QNKKCIS-IAAGTSNSFAVTDSGEVYSWGMGSEGKLG 392
++ K +S +AAG ++S +T G VY+ G G+LG
Sbjct: 226 KDAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLG 262
Score = 35.9 bits (79), Expect = 0.077
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 344 SGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLG 392
SGD L +L +K + IA G + A+TDSGE+ + G G G+LG
Sbjct: 478 SGDVVLLHR--ELDSKIIVQIACGAFHVAALTDSGELLTCGTGKHGQLG 524
Score = 32.7 bits (71), Expect = 0.72
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 145 LQNGDVYAWGSFRDS---HGSMGLVVRGREGKPCKEPVKIDIGEPAV-EIASGGDHLVVL 200
L +G Y+WG + HG++ + R K K V ++A+G H L
Sbjct: 185 LSSGVAYSWGRGGNGALGHGTLLSLARPSYVKRLYHGDKDGKDAKTVSQVAAGRAHSAFL 244
Query: 201 TTSGGVFTLGCGEQGQLG 218
T G V+T G + GQLG
Sbjct: 245 TKDGCVYTCGSNQYGQLG 262
Score = 32.7 bits (71), Expect = 0.72
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 309 SAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIP 354
S VA G+ H+ L +G +Y G +YG+LG K ET +L+P
Sbjct: 232 SQVAAGRAHSAFLTKDGCVYTCGSNQYGQLGYYTK----ETYKLLP 273
Score = 32.7 bits (71), Expect = 0.72
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 79 IVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDE 119
IV + G H AL SG++ T G G LG DE
Sbjct: 493 IVQIACGAFHVAALTDSGELLTCGTGKHGQLGHTHMRSSDE 533
>SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 35.1 bits (77), Expect = 0.13
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 362 ISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQH 421
+ I G ++ +TDS E+Y+ G + G+LG G++ +N L V VS G H
Sbjct: 89 LCITGGGGHTAMITDSRELYTCGWNNRGQLGLGDT--INRIELHRVLIPPVKHVSCGWNH 146
Query: 422 TVLL 425
T+ +
Sbjct: 147 TLAI 150
Score = 34.3 bits (75), Expect = 0.23
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 272 GLNNYGQL--GITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYA 329
G N+YGQL G T + K A+ S + D L G G HT + + ++Y
Sbjct: 60 GANSYGQLACGHTDDVIKPAVHSNWKDDVLCITG----------GGGHTAMITDSRELYT 109
Query: 330 LGRCEYGRLGLGDKSGDAETLE-LIPKLQNKKC 361
G G+LGLGD E LIP +++ C
Sbjct: 110 CGWNNRGQLGLGDTINRIELHRVLIPPVKHVSC 142
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 50 GQGDVGQLGLG--EDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEG 107
G GQL G +DV++ + D ++ + GG HT + S +++T G N+ G
Sbjct: 60 GANSYGQLACGHTDDVIKPAVH---SNWKDDVLCITGGGGHTAMITDSRELYTCGWNNRG 116
Query: 108 ALG 110
LG
Sbjct: 117 QLG 119
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 162 SMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLG 218
S G + G K V + + + I GG H ++T S ++T G +GQLG
Sbjct: 63 SYGQLACGHTDDVIKPAVHSNWKDDVLCITGGGGHTAMITDSRELYTCGWNNRGQLG 119
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 378 GEVYSWGMGSEGKLGTGESED---LNEPTLAAVDSRAPLRVSAGGQHTVLLVEETSSQRE 434
G V+SWG +G+LG + P + + ++ G HTVLL T Q+
Sbjct: 297 GSVWSWGDNKKGQLGCSRERSKKCIPFPVQVSFEGCRGKSIAVGLHHTVLL---TVIQKN 353
Query: 435 PSPI 438
P+ I
Sbjct: 354 PTDI 357
>SB_34545| Best HMM Match : RCC1 (HMM E-Value=0.027)
Length = 230
Score = 34.7 bits (76), Expect = 0.18
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 335 YGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGKLGTG 394
Y RLG+ + G+ T +I + +K ++A V SG VY++G G +G+LG G
Sbjct: 4 YLRLGVV-RQGNLVTTLIIMNIHLEKAHTLAL-------VPSSGRVYTFGRGGDGQLGLG 55
Query: 395 ESEDLNEPTLA 405
+ + N P A
Sbjct: 56 VTNNCNSPMTA 66
Score = 32.3 bits (70), Expect = 0.95
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 79 IVDVQAGGMHTIAL-DSSGKIWTFGCNDEGALGRATSN 115
I+++ HT+AL SSG+++TFG +G LG +N
Sbjct: 21 IMNIHLEKAHTLALVPSSGRVYTFGRGGDGQLGLGVTN 58
Score = 29.5 bits (63), Expect = 6.7
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 311 VALGQHHTLTLA-ANGQIYALGRCEYGRLGLG-DKSGDAETLELIPKLQN---KKCISIA 365
+ L + HTL L ++G++Y GR G+LGLG + ++ P L++ K + A
Sbjct: 24 IHLEKAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEA 83
Query: 366 AGTSNSFAV--TDSGEVYSWGMGSEGKLGTGESED--LNEPTLAAVDSRAPLRVSAGGQH 421
G S + V D+G + + M S T ED L P+ + + P+ + +
Sbjct: 84 DGDSVVYTVRRIDAGGDHCFAMASSYGDETDGPEDMRLPRPSQSILHLSVPVTMDLVKRA 143
Query: 422 TVLL-VEETSSQREPSPIP 439
T+ + + S + +P+P
Sbjct: 144 TIASDLSDVSDRSHLTPLP 162
>SB_3599| Best HMM Match : CLN3 (HMM E-Value=1.2e-08)
Length = 465
Score = 30.7 bits (66), Expect = 2.9
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 296 CDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPK 355
C ++A HA + L +H L G +LG G +GL + P
Sbjct: 380 CSGIQASNSYHAIANRTLAEHAQFILTIAGLAESLGMMTAGLIGLHTE----------PA 429
Query: 356 LQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGK 390
++ + C+ + SF +T + WG+G EG+
Sbjct: 430 MR-EHCLESQYYANQSFCMTRIKDAKFWGLGQEGQ 463
>SB_44425| Best HMM Match : SAM_1 (HMM E-Value=0.00024)
Length = 414
Score = 30.3 bits (65), Expect = 3.8
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 267 RLFAFGLNNYGQLGITGEKRKTALFSPTECD--ALRAVGDDHAWSAVALGQHHTLTLAAN 324
+L AFG+ +YGQ+ + A++ T CD A+ + D VA+G T+ LAA
Sbjct: 35 KLAAFGMRSYGQIICD----RIAIYGQTSCDRNAILSSECDRTAKLVAIGM-RTVKLAAT 89
Query: 325 GQIYALGRCEYGR 337
G + + G+ + R
Sbjct: 90 G-MRSYGQISFDR 101
>SB_59581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 29.5 bits (63), Expect = 6.7
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 29/163 (17%)
Query: 266 ARLFAFGLNNYGQLGITGEKRKTALFSPTEC---DALRAVGDDHAWSAVALGQHHTLTLA 322
A ++ FG N +GQ+ + + + SP DA + + + +WS T +
Sbjct: 9 ALVYGFGFNVFGQITGGTNQGEDVVESPIPVRVKDAEKVIKIEASWSC-------TFFVK 61
Query: 323 ANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYS 382
+G + +G + D D +T L+P +K C + G +++ +T SGE +
Sbjct: 62 EDGSVDVIGV-----IPNSDSIVDIKT-SLLP---DKLCKDFSCGWNSAVLLTHSGECLA 112
Query: 383 WGMGSEGKLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLL 425
W + +G ++ LN +D + ++VS G +HT+ +
Sbjct: 113 W---KDFNVGVEKAALLN------IDQKL-VKVSVGDEHTIAI 145
>SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 615
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 462 DITEQEGEITSTSAAKPEDVSNDTEPQKVNGDEKE 496
+I E E + S AA PE V+++++ K NGD+ +
Sbjct: 29 EIVEAEECVASALAALPESVASNSDLVKENGDQSQ 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.132 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,458,868
Number of Sequences: 59808
Number of extensions: 602123
Number of successful extensions: 1237
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 899
Number of HSP's gapped (non-prelim): 148
length of query: 506
length of database: 16,821,457
effective HSP length: 85
effective length of query: 421
effective length of database: 11,737,777
effective search space: 4941604117
effective search space used: 4941604117
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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