GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000072-TA|BGIBMGA000072-PA|IPR000408|Regulator of
chromosome condensation, RCC1, IPR009091|Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II
         (506 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    26   2.7  
AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione S-tran...    26   2.7  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     25   3.6  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 415 VSAGGQHTVLLVEETSSQREPSPI 438
           V+ GG H + L++E S    PSP+
Sbjct: 559 VAPGGDHLISLIDEISYVSPPSPM 582


>AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione
           S-transferase D3 protein.
          Length = 210

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 278 QLGITGEKRKTALFSPTECDALRAVGDDH 306
           +LGIT   +KT +  P E DAL  +   H
Sbjct: 21  KLGITLNLKKTNIHDPVERDALTKLNPQH 49


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 217 LGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFV 260
           LG+LA  S + DARQ +  L  PA   L++  A V AG +   V
Sbjct: 236 LGKLAFLSQNADARQLYLGLFNPA---LKRLQAAVIAGSYDEIV 276


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.132    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,046
Number of Sequences: 2123
Number of extensions: 18482
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 3
length of query: 506
length of database: 516,269
effective HSP length: 67
effective length of query: 439
effective length of database: 374,028
effective search space: 164198292
effective search space used: 164198292
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 50 (24.2 bits)