Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000071-TA|BGIBMGA000071-PA|undefined
(144 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15350.1 68418.m01797 plastocyanin-like domain-containing pro... 30 0.53
At4g35010.1 68417.m04965 glycosyl hydrolase family 35 protein si... 30 0.70
At2g16730.1 68415.m01919 glycosyl hydrolase family 35 protein si... 30 0.70
At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR... 29 0.92
At4g32400.1 68417.m04613 mitochondrial substrate carrier family ... 29 1.6
At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si... 28 2.1
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 28 2.1
At5g63800.1 68418.m08007 glycosyl hydrolase family 35 protein si... 28 2.8
At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,... 27 3.7
At4g26260.1 68417.m03779 expressed protein similar to myo-inosit... 27 4.9
At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR... 26 8.6
At5g13980.2 68418.m01635 glycosyl hydrolase family 38 protein si... 26 8.6
At5g13980.1 68418.m01634 glycosyl hydrolase family 38 protein si... 26 8.6
At2g20580.1 68415.m02404 26S proteasome regulatory subunit S2 (R... 26 8.6
>At5g15350.1 68418.m01797 plastocyanin-like domain-containing
protein contains plastocyanin-like domain Pfam:PF02298
Length = 172
Score = 30.3 bits (65), Expect = 0.53
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 54 AELTVDITTVGIQITYEAYLSGVVALAYDRPHNGHHFWAPNIDHVLYTCG 103
A TV IT V + A + GV A Y N FW PNI++ ++ G
Sbjct: 2 ARFTVLITAVVLAFLMAAPMPGVTAKKYTVGEN--KFWNPNINYTIWAQG 49
>At4g35010.1 68417.m04965 glycosyl hydrolase family 35 protein
similar to beta-galactosidase BG1 GI:15081596 from
[Vitis vinifera]
Length = 845
Score = 29.9 bits (64), Expect = 0.70
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 94 NIDHVLYTCGTKNGITSEQYINISYYDNANL 124
++++ +Y GT G TS Y+ YYD+A L
Sbjct: 303 HVNYYMYHGGTNFGRTSAHYVTTRYYDDAPL 333
>At2g16730.1 68415.m01919 glycosyl hydrolase family 35 protein
similar to beta-galactosidase BG1 GI:15081596 from
[Vitis vinifera]
Length = 848
Score = 29.9 bits (64), Expect = 0.70
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 94 NIDHVLYTCGTKNGITSEQYINISYYDNANL 124
++++ +Y GT G TS Y+ YYD+A L
Sbjct: 306 HVNYYMYHGGTNFGRTSAHYVTTRYYDDAPL 336
>At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1127
Score = 29.5 bits (63), Expect = 0.92
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 86 NGHHFWAPNIDHVLYTCGTKNGITSEQYINISYYDNANL-VFLDLNSGITVDAFRVPV 142
N H A IDH+ C N + E + ++ N+ FL+L+S + + A +P+
Sbjct: 333 NKHFLRANRIDHIYKVCLPSNALALEMFCRSAFKKNSPPDDFLELSSEVALRAGNLPL 390
>At4g32400.1 68417.m04613 mitochondrial substrate carrier family
protein
Length = 392
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 19 KFNASFGQDSQFTVPITLVHGFCANV--TLV--PGQLARAELTV 58
K + GQ+S+ +P +L+ G CA V TL+ P +L + LT+
Sbjct: 191 KLSPPHGQESKIPIPASLLAGACAGVSQTLLTYPLELVKTRLTI 234
>At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile PF01301
: Glycosyl hydrolases family 35
Length = 988
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 94 NIDHVLYTCGTKNGITSEQYINISYYDNANL 124
++++ +Y GT G TS ++ YYD+A L
Sbjct: 233 HVNYYMYHGGTNFGRTSAHFVTTRYYDDAPL 263
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 64 GIQITYEAYLSGVVALAYDRPHNGHHFWAPNIDHVL 99
G+++T E++L D H GHH+W P +L
Sbjct: 138 GVEVTVESHLDDDDDHHGDL-HRGHHYWIPTPSQIL 172
>At5g63800.1 68418.m08007 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile
PF01301: Glycosyl hydrolases family 35
Length = 718
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 95 IDHVLYTCGTKNGITSEQYINISYYDNANL 124
I++ +Y GT G TS Y YYD A L
Sbjct: 295 INYYMYHGGTNFGRTSSSYFITGYYDQAPL 324
>At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase SP:P45582 from
[Asparagus officinalis]
Length = 815
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 95 IDHVLYTCGTKNGITSEQYINISYYDNANL 124
+++ +Y GT G + Q++ SYYD A L
Sbjct: 288 VNYYMYHGGTNFGRNASQFVITSYYDQAPL 317
>At4g26260.1 68417.m03779 expressed protein similar to myo-inositol
oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
Length = 317
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 77 VALAYDRPHNGHHFWAPNIDHVLYTCGTKNGITSE 111
V A+D + H ++ N D T TKNGI SE
Sbjct: 179 VGCAFDESNVHHKYFVENPDFHNETYNTKNGIYSE 213
>At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1123
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 86 NGHHFWAPNIDHVLYTCGTKNGITSEQYINISYYDNANL-VFLDLNSGITVDAFRVPV 142
N H A IDHV C + E + ++ N+ F++L+S + + A +P+
Sbjct: 330 NKHFLRAHGIDHVYEACLPSEELALEMFCRYAFRKNSPPDGFMELSSEVALRAGNLPL 387
>At5g13980.2 68418.m01635 glycosyl hydrolase family 38 protein
similar to alpha-mannosidase GI:1419374 from [Homo
sapiens]
Length = 1024
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 4 DKNIILATQNRASSFKFNASFGQDSQFTVPITLVHG 39
DK ++ + A F+ N +F + + VP+T++HG
Sbjct: 641 DKEPLIPQNSGAYVFRPNGTFPINPEGQVPLTVIHG 676
>At5g13980.1 68418.m01634 glycosyl hydrolase family 38 protein
similar to alpha-mannosidase GI:1419374 from [Homo
sapiens]
Length = 921
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 4 DKNIILATQNRASSFKFNASFGQDSQFTVPITLVHG 39
DK ++ + A F+ N +F + + VP+T++HG
Sbjct: 641 DKEPLIPQNSGAYVFRPNGTFPINPEGQVPLTVIHG 676
>At2g20580.1 68415.m02404 26S proteasome regulatory subunit S2
(RPN1) contains an APC-complex (cyclosome) and
proteasome component repeat ( PS50248)
Length = 891
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 10 ATQNRASSFK---FNASFGQDSQFTVPITLVHGFCAN 43
A QN A++F NA FGQD TVP G N
Sbjct: 366 ARQNLAATFVNAFVNAGFGQDKLMTVPSDSTTGSSGN 402
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,270,381
Number of Sequences: 28952
Number of extensions: 119794
Number of successful extensions: 232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 223
Number of HSP's gapped (non-prelim): 14
length of query: 144
length of database: 12,070,560
effective HSP length: 75
effective length of query: 69
effective length of database: 9,899,160
effective search space: 683042040
effective search space used: 683042040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
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