GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000071-TA|BGIBMGA000071-PA|undefined
         (144 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    27   0.066
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.27 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.27 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   0.61 
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   1.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   2.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   10.0 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   10.0 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   10.0 

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 0.066
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 67  ITYEAYLSGVVALAYDRPHN--GHHFWAPNIDHVLYTCGTKNGI 108
           I Y+   S  + + + + HN  G   W  ++D  L  CG KNG+
Sbjct: 326 IGYDDEESVALKVQFAKDHNMAGLMIWTVDMDDFLGLCGPKNGL 369


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.27
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 97  HVLYTCGTKNGITSEQYINISYYDN 121
           H+L   GT  G+ S+ ++ IS YD+
Sbjct: 585 HMLIPKGTPEGMKSQLFVMISNYDD 609


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 0.27
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 85  HNGHHFWAPNIDHVLYTCGTKNGITSEQYINISYY 119
           + G   WA ++D     CG KN + +  Y N++ Y
Sbjct: 363 YGGAMTWAIDMDDFHGLCGPKNPLINILYANMNSY 397


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 0.61
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 80  AYDRPHNGHHFWAPNIDHVLYTCGTKNGI 108
           A D    G   W+   D +  TCGTKN +
Sbjct: 338 AKDNNLAGVMIWSIETDDLHATCGTKNAL 366


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 67  ITYEAYLSGVVALAYDRPHN--GHHFWAPNIDHVLYTCGTKNGI 108
           I Y+   S  +   Y +  N  G   W+   D +   CG KNG+
Sbjct: 324 IGYDNEQSVTIKTEYAKEKNLAGVFIWSIETDDMHEFCGEKNGL 367


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 80  AYDRPHNGHHFWAPNIDHVLYTCGTKNGI 108
           A D    G   W+ + D  L +CGTK+ +
Sbjct: 329 AKDNGLAGVAVWSIDTDDFLGSCGTKDAL 357


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query: 89  HFWAPNIDHVLYT 101
           H W+PN D +  T
Sbjct: 234 HIWSPNCDKLSST 246


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query: 89  HFWAPNIDHVLYT 101
           H W+PN D +  T
Sbjct: 467 HIWSPNCDKLSST 479


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query: 89  HFWAPNIDHVLYT 101
           H W+PN D +  T
Sbjct: 467 HIWSPNCDKLSST 479


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,412
Number of Sequences: 317
Number of extensions: 1441
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 144
length of database: 114,650
effective HSP length: 51
effective length of query: 93
effective length of database: 98,483
effective search space:  9158919
effective search space used:  9158919
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)