GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000071-TA|BGIBMGA000071-PA|undefined
         (144 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p pro...    29   1.8  
AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA...    29   1.8  

>AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p
           protein.
          Length = 595

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 83  RPHNGHHFWAPNIDHVLYTCGTKNGITSEQYINISYY 119
           R + G   WA ++D     CG KNG+T   Y N+  Y
Sbjct: 366 RGYAGAMTWAIDMDDFHGMCGRKNGLTQILYDNMKNY 402


>AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA
           protein.
          Length = 595

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 83  RPHNGHHFWAPNIDHVLYTCGTKNGITSEQYINISYY 119
           R + G   WA ++D     CG KNG+T   Y N+  Y
Sbjct: 366 RGYAGAMTWAIDMDDFHGMCGRKNGLTQILYDNMKNY 402


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,736,005
Number of Sequences: 52641
Number of extensions: 252665
Number of successful extensions: 540
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 538
Number of HSP's gapped (non-prelim): 2
length of query: 144
length of database: 24,830,863
effective HSP length: 78
effective length of query: 66
effective length of database: 20,724,865
effective search space: 1367841090
effective search space used: 1367841090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)