Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000070-TA|BGIBMGA000070-PA|undefined
         (267 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.0  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   8.7  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 55  PWGDLYETYSWEEVERHFRPQRAIKNIIKNKMVVLSQQFYNNQGNSTVFSVKIEDKIENY 114
           P G   E   WE       P R I +       VL +  +     ST++S K  D +  +
Sbjct: 613 PDGGRAEINEWERCNLGLEPPRVILSSGAKSPTVLEELTHGTLAASTLYS-KRPDLL--H 669

Query: 115 VASKWTKAQELTVND 129
           +   W+    L   D
Sbjct: 670 LFGSWSNRPNLLFKD 684


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 55  PWGDLYETYSWEEVERHFRPQRAIKNIIKNKMVVLSQQFYNNQGNSTVFSVKIEDKIENY 114
           P G   E   WE       P R I +       VL +  +     ST++S K  D +  +
Sbjct: 613 PDGGRAEINEWERCNLGLEPPRVILSSGAKSPTVLEELTHGTLAASTLYS-KRPDLL--H 669

Query: 115 VASKWTKAQELTVND 129
           +   W+    L   D
Sbjct: 670 LFGSWSNRPNLLFKD 684


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 55  PWGDLYETYSWEEVERHFRPQRAIKNIIKNKMVVLSQQFYNNQGNSTVFSVKIEDKIENY 114
           P G   E   WE       P R I +       VL +  +     ST++S K  D +  +
Sbjct: 613 PDGGRAEINEWERCNLGLEPPRVILSSGAKSPTVLEELTHGTLAASTLYS-KRPDLL--H 669

Query: 115 VASKWTKAQELTVND 129
           +   W+    L   D
Sbjct: 670 LFGSWSNRPNLLFKD 684


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 11 SGCNSDVISDTETLTFNLTDANLKNAVE 38
          +G N  +I+D      N+ D N++  +E
Sbjct: 37 TGINKQIINDVNDGKINIEDENVQLYIE 64


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.132    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,957
Number of Sequences: 429
Number of extensions: 3386
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 267
length of database: 140,377
effective HSP length: 57
effective length of query: 210
effective length of database: 115,924
effective search space: 24344040
effective search space used: 24344040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)