GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000070-TA|BGIBMGA000070-PA|undefined
         (267 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79995-1|BAA11490.2| 1203|Homo sapiens KIAA0173 protein.               30   7.3  
BC021707-1|AAH21707.1| 1199|Homo sapiens tubulin tyrosine ligase...    30   7.3  

>D79995-1|BAA11490.2| 1203|Homo sapiens KIAA0173 protein.
          Length = 1203

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 186 IEVIIDYEAHLTGLTAVNYVRKYDNHHFWGLDINTVMAASRLKPTV-KVMEEITIEYYSD 244
           ++ II  E ++T L  +   R Y  H  +G DI   M    LKP V +V    ++   S 
Sbjct: 866 VKTIISSEPYVTSLLKMYVRRPYSCHELFGFDI---MLDENLKPWVLEVNISPSLHSSSP 922

Query: 245 AKIIITDQNTSDVLN 259
             I I  Q   D+LN
Sbjct: 923 LDISIKGQMIRDLLN 937


>BC021707-1|AAH21707.1| 1199|Homo sapiens tubulin tyrosine
           ligase-like family, member 4 protein.
          Length = 1199

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 186 IEVIIDYEAHLTGLTAVNYVRKYDNHHFWGLDINTVMAASRLKPTV-KVMEEITIEYYSD 244
           ++ II  E ++T L  +   R Y  H  +G DI   M    LKP V +V    ++   S 
Sbjct: 862 VKTIISSEPYVTSLLKMYVRRPYSCHELFGFDI---MLDENLKPWVLEVNISPSLHSSSP 918

Query: 245 AKIIITDQNTSDVLN 259
             I I  Q   D+LN
Sbjct: 919 LDISIKGQMIRDLLN 933


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.132    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,909,831
Number of Sequences: 224733
Number of extensions: 1292815
Number of successful extensions: 2652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2652
Number of HSP's gapped (non-prelim): 2
length of query: 267
length of database: 73,234,838
effective HSP length: 89
effective length of query: 178
effective length of database: 53,233,601
effective search space: 9475580978
effective search space used: 9475580978
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)