Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000069-TA|BGIBMGA000069-PA|IPR004343|Plus-3
         (763 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   1.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   1.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 569  QLRGDDELVMDLNSKIEELEERANQLDKTRTSSIQSISYINNRNRKLNVETAEKAIME 626
            QLR   E + DLN KIE LE+   Q    R+ ++ +++     ++       E   ME
Sbjct: 1101 QLRKIQESLRDLNRKIESLEKM--QYPDLRSPAVSNVTTFMEGSKATVKNNVEDNYME 1156


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 569  QLRGDDELVMDLNSKIEELEERANQLDKTRTSSIQSISYINNRNRKLNVETAEKAIME 626
            QLR   E + DLN KIE LE+   Q    R+ ++ +++     ++       E   ME
Sbjct: 1101 QLRKIQESLRDLNRKIESLEKM--QYPDLRSPAVSNVTTFMEGSKATVKNNVEDNYME 1156


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.127    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,970
Number of Sequences: 317
Number of extensions: 4053
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 2
length of query: 763
length of database: 114,650
effective HSP length: 62
effective length of query: 701
effective length of database: 94,996
effective search space: 66592196
effective search space used: 66592196
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 47 (23.0 bits)