BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000069-TA|BGIBMGA000069-PA|IPR004343|Plus-3 (763 letters) Database: mosquito 2123 sequences; 516,269 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 27 1.4 AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 3.2 AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 26 4.3 AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 4.3 AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 9.8 >AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein protein. Length = 527 Score = 27.5 bits (58), Expect = 1.4 Identities = 11/31 (35%), Positives = 20/31 (64%) Query: 169 ARLAAMSEKEREQEIFKRIERRDLMKTRWEI 199 ARL + E +REQE+ +R+E + + R ++ Sbjct: 156 ARLESQQELQREQELLRRMESQQRQEQRQQL 186 >AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein protein. Length = 541 Score = 26.2 bits (55), Expect = 3.2 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 691 ENHEEAKRSRGEHPTSSDTSLYSLHDFEINIDLDLPAAKSVSSQPKQVTTKVKETGPKRS 750 E EEAKR R E + L + H + N+ L AAK QP + + P+RS Sbjct: 130 EEKEEAKR-REEKLKAQMEKLAAAHQRDRNLLNSLLAAKVAGGQPSASSRQPPTPLPRRS 188 >AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. Length = 1201 Score = 25.8 bits (54), Expect = 4.3 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 582 SKIEELEERANQLDKTRTSSIQSISYINNRNRKLNVETAEKAIMEEVKRIKKKTDD 637 +K+E L N L + + +Q++ I+ +RK + ++ KRIKK D Sbjct: 826 NKLENL--LTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVVATEKRIKKVLTD 879 >AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. Length = 1229 Score = 25.8 bits (54), Expect = 4.3 Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 564 ERDVAQLRGDDELVMDLNSKIEELEERANQLDKTRTSSIQSISYINNRNRKLNVETAE-K 622 E + L D++ +S +EL+ + + L+K +T +++++ ++ K+ E + Sbjct: 987 EHHLKNLSDPDQIKKSGDSLAKELQSKLDTLEKIQTPNMKAMQKLDRVTEKIQSTNEEFE 1046 Query: 623 AIMEEVKRIK 632 A ++ K+ K Sbjct: 1047 AARKKAKKAK 1056 Score = 25.4 bits (53), Expect = 5.6 Identities = 13/36 (36%), Positives = 19/36 (52%) Query: 159 ENLMGDEEDRARLAAMSEKEREQEIFKRIERRDLMK 194 E + D+ED +E + QEI K E+ +LMK Sbjct: 849 ERAVQDDEDSLETFKQAEARQRQEIEKDKEKIELMK 884 >AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative differentiation regulator protein. Length = 1283 Score = 24.6 bits (51), Expect = 9.8 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%) Query: 165 EEDRARLA--AMSEKEREQEIFKRIERRDLMKTRWE 198 EE+RAR A A E+E+E+E+ ++ ER K + E Sbjct: 454 EEERAREAREAAIEREKERELREQREREQREKEQRE 489 Database: mosquito Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 516,269 Number of sequences in database: 2123 Lambda K H 0.310 0.127 0.346 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 519,283 Number of Sequences: 2123 Number of extensions: 16937 Number of successful extensions: 36 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 30 Number of HSP's gapped (non-prelim): 7 length of query: 763 length of database: 516,269 effective HSP length: 69 effective length of query: 694 effective length of database: 369,782 effective search space: 256628708 effective search space used: 256628708 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.7 bits) S2: 51 (24.6 bits)
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