Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000068-TA|BGIBMGA000068-PA|IPR000172|Glucose-methanol-
choline oxidoreductase, N-terminal, IPR007867|Glucose-methanol-choline
oxidoreductase, C-terminal, IPR012132|Glucose-methanol-choline
oxidoreductase
(580 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 105 7e-23
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 100 4e-21
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 95 1e-19
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 92 1e-18
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 58 3e-08
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 56 8e-08
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 56 8e-08
10_08_0354 - 17104223-17106061,17106770-17106794,17107317-171075... 36 0.089
09_06_0367 + 22601881-22602097,22602212-22603254 32 1.4
01_01_0430 + 3258438-3259200,3259929-3261454 31 3.3
04_04_0299 - 24243364-24244259,24244417-24244428,24245092-242451... 30 4.4
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 30 5.8
01_04_0074 + 15760667-15761815 30 5.8
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 29 7.7
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 105 bits (253), Expect = 7e-23
Identities = 110/407 (27%), Positives = 179/407 (43%), Gaps = 36/407 (8%)
Query: 203 IMESFEEIGVPSVLDLNTNNTVGFTESSFIIGNGRRQSTSQAYLNNLKRDNLYVLTETVA 262
+ ++ E+GV ++ G I N ++ T+ +L + + L VL
Sbjct: 180 LRDALLEVGVTPDNGFTFDHVTGTKIGGTIFDNSGQRHTAADFLRHARPRGLTVLLYATV 239
Query: 263 EKIIFEDN------VAVGVILRLGSGEKITVYAN----REVIVSAGTFNSPKLLMLSGIG 312
+I+F+ VA GV+ G + VY EVIVSAGT SP+LLMLSG+G
Sbjct: 240 SRILFKSQDGVPYPVAYGVVFSDPLGVQHRVYLRDGDKNEVIVSAGTLGSPQLLMLSGVG 299
Query: 313 PAEELQKFGIDVIKDLP-VGKDMQDH--FAVLLLNKLERSIEISQIPQLTRLAFPVLLGG 369
P L+ GI+VI D P VG+ + D+ +V + + + + + Q+ +TR + G
Sbjct: 300 PQAHLEAHGIEVIVDQPMVGQGVADNPMNSVFIPSPVPVELSLVQVVGITRSG--SFIEG 357
Query: 370 INLDGSKCCPDYQIIGLKFTHDTPYFLLTCTVLFGL--KHEICSKLN--AETIGRNHLVT 425
++ GS+ L++ L L K L AE + R
Sbjct: 358 VS--GSEFGMPVSDGALRWARSFGMLSPQTGQLGTLPPKQRTPEALQRAAEAMMRLDRRA 415
Query: 426 FIGAF------HPESRGYVKLRSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNS- 478
F G F P S G+V+LR+ DP +P ++ +++ A+D + ++ V S
Sbjct: 416 FRGGFILEKILGPVSSGHVELRTTDPRANPSVTFNYFREAEDLERCVHGIETIERVIQSR 475
Query: 479 --SYFREINAEVADPGLDECG------EMSLDNEDYLECYIKGMTVTIFHQTSTCAMGSV 530
S F NA V D +++ E Y +TI+H C +G+V
Sbjct: 476 AFSNFTYANASVESIFTDSANFPVNLLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAV 535
Query: 531 VDSNMQVYGVENLRVIDASTMPNITRANTLAASIMMAEKMSDVIKNK 577
VD + +V+GV+ LRVID+ST N A +M+ M I+++
Sbjct: 536 VDDDYRVFGVQGLRVIDSSTFKYSPGTNPQATVMMLGRYMGVKIQSE 582
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 100 bits (239), Expect = 4e-21
Identities = 141/562 (25%), Positives = 231/562 (41%), Gaps = 62/562 (11%)
Query: 45 FDFIVIGSGV-GAVIANRLTENEDVRVLLIEAGKNPSVESMLPGLFILLQNSYQDWNYVS 103
+D+I+IG G G +A L+E RVLL+E G +P ++ + + + D + S
Sbjct: 43 YDYIIIGGGTAGCPLAATLSER--YRVLLLERGGSPYDDARVLNM-AHFADVLADTSGAS 99
Query: 104 EPEEATKNQQVGAYRTSAGKCLGGSSNINHFIHLRGDPCDFDSWAAYLKDESWSYKNVLP 163
+ V R + LGG S IN R P Y++ W K V+
Sbjct: 100 PSQRFVSEDGVINARP---RVLGGGSCINAGFFTRAGP-------GYVRALGWDPKEVVS 149
Query: 164 YFRKSETVQDEDILKYYANFHGVDGPVIITRQPDDSTRNIMESFEEIGVPSVLDLNTNNT 223
++ E D++ + GP + R ++E IGV ++
Sbjct: 150 AYQWVE-----DVVAFQPEL----GPWQAALR-----RGLLE----IGVVPDNGFTYDHI 191
Query: 224 VGFTESSFIIGNGRRQSTSQAYLNNLKRDNLYVLTETVAEKIIFEDN----VAVGVILRL 279
+G I R+ T+ L + D + V +I+F VA GV+
Sbjct: 192 LGTKVGGSIFDAQGRRHTAADLLRYSRPDGIDVFLRARVARIVFSRKGTKPVARGVLYHD 251
Query: 280 GSGEKITVYANR----EVIVSAGTFNSPKLLMLSGIGPAEELQKFGIDVIKDLP-VGKDM 334
G Y N E+I+SAG SP+LLMLSG+GPA+ L++FGI ++ D P VG+ M
Sbjct: 252 ARGGSHMAYLNHGARNEIILSAGALGSPQLLMLSGVGPADHLEEFGISLVLDHPGVGQGM 311
Query: 335 QDH--FAVLLLNKLERSIEISQIPQLTRLAFPVLLGGINLDGSKCCPDYQIIGLK-FTHD 391
D+ A+ + + + + Q+ +TR + G D + ++ F
Sbjct: 312 SDNPMNAIYVPSPSPVELSLIQVVGITRFG-SYIEGASGSDWNSRTSGAAAAQVRSFGMF 370
Query: 392 TPYFLLTCTVLFGLKHEICSKLNAETIGRNHLVTFIGAF------HPESRGYVKLRSADP 445
+P TV + E + + G F P+S G + LR+ DP
Sbjct: 371 SPQTGQLATVPPKQRTPEAIARAVEAMSQVPDAALRGGFILEKVLGPQSTGRLALRNLDP 430
Query: 446 NDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSSYF-REINAEVADPG-LDECGEMSLD- 502
+D+P +S +++S+ D + V S F R A P ++ E +
Sbjct: 431 DDNPTVSFNYFSHPDDLRRCAAGIATIERVIRSRAFSRFAYPNFAFPATINVTAEFPANL 490
Query: 503 -------NEDYLECYIKGMTVTIFHQTSTCAMGSVVDSNMQVYGVENLRVIDASTMPNIT 555
+ LE + + +TI+H C +G VVD + +V G+E LRVID ST N +
Sbjct: 491 MRMRGGSDPRALEQFCRDTVMTIWHYHGGCQVGRVVDRDYRVLGIEALRVIDGSTF-NAS 549
Query: 556 RANTLAASIMMAEKMSDVIKNK 577
A++MM ++ I K
Sbjct: 550 PGTNPQATVMMLGRLKPPITLK 571
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 95.5 bits (227), Expect = 1e-19
Identities = 137/566 (24%), Positives = 231/566 (40%), Gaps = 68/566 (12%)
Query: 45 FDFIVIGSGV-GAVIANRLTENEDVRVLLIEAGKNPSVESMLPGLFILLQNSYQDWNYVS 103
+D+I++G G G +A L++ RVLL+E G +P + + G ++ D + S
Sbjct: 49 YDYIIVGGGTAGCPLAATLSQR--FRVLLLERGGSPYDDERI-GNMTRFADTLSDTSPSS 105
Query: 104 EPEEATKNQQVGAYRTSAGKCLGGSSNINHFIHLRGDPCDFDSWAAYLKDESWSYKNVLP 163
+ V S + LGG S IN + R Y++ W +
Sbjct: 106 PAQRFVSEDGV---INSRPRVLGGGSCINAGFYTRASD-------EYVRGLGWDLEATTA 155
Query: 164 YFRKSETVQDEDILKYYANFHGVDGPVIITRQPDDSTRNIMESFEEIGVPSVLDLNTNNT 223
+R E D++ + GP + R ++E+ G+ ++
Sbjct: 156 AYRWVE-----DVVAFQPEL----GPWQSALE-----RGLLEA----GIAPQNGFTFDHL 197
Query: 224 VGFTESSFIIGNGRRQSTSQAYLNNLKRDNLYVLTETVAEKIIFEDN-----VAVGVILR 278
G I R+ T+ L + D + VL KI+F VA GV+
Sbjct: 198 GGTKVGGSIFDAEGRRHTAADLLRYARTDGIDVLLRARVAKILFNVRAGRRPVAHGVVFH 257
Query: 279 LGSGEKITVYANR----EVIVSAGTFNSPKLLMLSGIGPAEELQKFGIDVIKDLP-VGKD 333
G+ Y + E+I+SAG SP+LLMLSG+GPA+ L+ FGI ++ + P VG+
Sbjct: 258 DSEGQMHRAYLSNGRGNEIILSAGAMGSPQLLMLSGVGPADHLRSFGITLVLNQPAVGQG 317
Query: 334 MQDH--FAVLLLNKLERSIEISQIPQLTRLAFPV-----LLGGINLDGSKCCPDYQIIGL 386
M D+ A+ + + + + Q+ +T + + G+ GS ++ G+
Sbjct: 318 MSDNPMNAIYVPSPSPVEVSLIQVVGITEVGSYIEGASGANWGVRRSGSGGDRPHRNFGM 377
Query: 387 KFTHDTPYFLLTCTVLFGLKHEICSKLNAETIGRNHLVTFIGAF------HPESRGYVKL 440
F+ T TV + AE + + F G F P S G+++L
Sbjct: 378 -FSPQTGQL---ATVPPKQRTPEAIARAAEAMSQLDDTAFRGGFILEKILGPLSTGHLEL 433
Query: 441 RSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSS--------YFREINAEVADPG 492
R+ +P+D+P ++ +++++ +D V V S YF G
Sbjct: 434 RNRNPDDNPSVTFNYFAHPEDLRRCVAGVSVIERVIRSEAFANFTYPYFSVETLLNMTAG 493
Query: 493 LDECGEMSLDNED-YLECYIKGMTVTIFHQTSTCAMGSVVDSNMQVYGVENLRVIDASTM 551
DN+ LE + K +TI+H C + VVD+ +V GV+ LRVID ST
Sbjct: 494 FPVNLRPRHDNDSTSLEQFCKDTVMTIWHYHGGCQVNRVVDAEYRVIGVDALRVIDGSTF 553
Query: 552 PNITRANTLAASIMMAEKMSDVIKNK 577
N A +M+ M I+N+
Sbjct: 554 NASPGTNPQATVMMLGRYMGVKIQNE 579
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 92.3 bits (219), Expect = 1e-18
Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 34/330 (10%)
Query: 271 VAVGVILRLGSGEKITVY----ANREVIVSAGTFNSPKLLMLSGIGPAEELQKFGIDVIK 326
VA GV+ +G + VY A EVIV+AGT SP+LLMLSG+GP EL+K GI +
Sbjct: 249 VAYGVVFTDPAGVRHHVYLRGGAKSEVIVTAGTLGSPQLLMLSGVGPRGELEKHGILPVL 308
Query: 327 DLP-VGKDMQDH--FAVLLLNKLERSIEISQIPQLTRLAFPV--LLG---GINLDGSKCC 378
D P VG+ + D+ +V + + + ++ + QI ++R + + G GI L G
Sbjct: 309 DQPRVGQGVADNPMNSVFVPSPVPVALSLVQIVGVSRFGTFIEGVSGSQFGIPLHGRAAS 368
Query: 379 PDYQIIGLKFTHDTPYFLLTCTVLFGLKHEICSKLNAETIGRNHLVTFIGAF------HP 432
+ G+ +P TV + + AE + R F G F P
Sbjct: 369 RRARSFGM----FSPMTGQLGTVPPKERTPEAMRRAAEAMRRLDRRAFRGGFILEKILGP 424
Query: 433 ESRGYVKLRSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSSYFREI---NAEVA 489
S G+V LRSADP+ +P ++ +++ + +D + + ++ V S F N
Sbjct: 425 MSTGHVALRSADPDANPAVTFNYFRDPRDVERCVRGIETIERVVRSRAFARFTYANVTAM 484
Query: 490 DPGL--DECGEMSLD-------NEDYLECYIKGMTVTIFHQTSTCAMGSVVDSNMQVYGV 540
+ + G + ++ + L+ Y + +TI+H C +G+VVD + +V GV
Sbjct: 485 EAAVLGRRAGHLPVNLLPRRATDTRPLQQYCRETVMTIWHYHGGCHVGAVVDQDYRVLGV 544
Query: 541 ENLRVIDASTMPNITRANTLAASIMMAEKM 570
LRV+D+ST N A +M+ M
Sbjct: 545 RGLRVVDSSTFKYSPGTNPQATVMMLGRYM 574
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 57.6 bits (133), Expect = 3e-08
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 432 PESRGYVKLRSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSSYFREINAEVADP 491
P S G++ L D +P ++ +++S+ +D +K + ++ F E++A
Sbjct: 421 PLSTGHLALIDTDVKKNPAVTFNYFSHPQDLTRCVYGIKTIERILKTNRFSELSANTDGH 480
Query: 492 GLDECGEMSL-----------DNEDYLECYIKGMTVTIFHQTSTCAMGSVVDSNMQVYGV 540
++ MS+ ++ + LE + + +TI+H C +G VVD +V GV
Sbjct: 481 SMERVLNMSVQANVNLIPKHTNDTESLEQFCRDTVITIWHYHGGCHVGKVVDQQHRVLGV 540
Query: 541 ENLRVIDASTMPNITRANTLAASIMM 566
+RV+D ST N A +MM
Sbjct: 541 SGVRVVDGSTFSRSPGTNPQATVMMM 566
Score = 46.4 bits (105), Expect = 6e-05
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 292 EVIVSAGTFNSPKLLMLSGIGPAEELQKFGIDVI-KDLPVGKDMQDH 337
E+IVSAG SP+LL+LSGIGP +L+ I V+ + VGK M D+
Sbjct: 278 EIIVSAGAIGSPQLLLLSGIGPKNDLRSHKIPVVLHNKYVGKGMADN 324
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 56.0 bits (129), Expect = 8e-08
Identities = 78/312 (25%), Positives = 129/312 (41%), Gaps = 38/312 (12%)
Query: 43 DCFDFIVIGSGV-GAVIANRLTENEDVRVLLIEAGKNPSVE---SMLPGLFILLQNSYQD 98
+ +D+I++G G G +A L++ +VLL+E G +P S L I L + +
Sbjct: 48 EAYDYIIVGGGTAGCPLAATLSQK--YKVLLLERGGSPYGNRNISHLENFHICLADDSPN 105
Query: 99 WNYVSEPEEATKNQQVGAYRTSAGKCLGGSSNINHFIHLRGDPCDFDSWAAYLKDESWSY 158
P + + G A K LGG +++N + R DP S +K
Sbjct: 106 -----SPSQGFISTD-GVINARA-KVLGGGTSVNAGFYSRADP----SKNVIVK------ 148
Query: 159 KNVLPYFRKSETVQDE--DILKYYANFHGVDGPVIITRQPDDSTRNIMESFEEIGVPSVL 216
V+ VQD D ++ ++ ++ + + E GV
Sbjct: 149 --VIAEIPTISFVQDAGWDAELVNQSYPWIEERIVYWPNITPWQAALRDGLLEAGVSPYN 206
Query: 217 DLNTNNTVGFTESSFIIGNGRRQSTSQAYLNNLKRDNLYVLTETVAEKIIFEDNV----- 271
+ ++ G I + T+ L +NL VL +IIF
Sbjct: 207 GYSYDHLFGTKVGGTIFDEAGYRHTAADLLAAGNHNNLRVLLHASVTRIIFNTEQEHRKP 266
Query: 272 -AVGVILRLGSGEKITVYANR----EVIVSAGTFNSPKLLMLSGIGPAEELQKFGIDVI- 325
+GV + +G + + R E+I+SAG SP+LL+LSGIGP +EL+K I V+
Sbjct: 267 RTIGVEFKDENGGQQHAFLTRNRDSEIIISAGAIGSPQLLLLSGIGPRKELKKHNISVVL 326
Query: 326 KDLPVGKDMQDH 337
++ VGK M D+
Sbjct: 327 RNEHVGKGMSDN 338
Score = 52.8 bits (121), Expect = 7e-07
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 432 PESRGYVKLRSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSSYFREINAEVADP 491
P S G + L D N +P ++ +++ + KD +K + +++F
Sbjct: 435 PLSTGNLVLVDTDINSNPTVTFNYFQHPKDLSRCVYGIKTIERILKTNHFTNFTLNGGGY 494
Query: 492 GLDECGEMSL-----------DNEDYLECYIKGMTVTIFHQTSTCAMGSVVDSNMQVYGV 540
++ MS+ ++ +E + + VTI+H C +G VVD +V GV
Sbjct: 495 PMEVVLNMSVTANINLIPKHTNDSTSMEQFCRDTVVTIWHYHGGCHVGKVVDQQYRVIGV 554
Query: 541 ENLRVIDASTMPNITRANTLAASIMM 566
LRVID ST+ N A +MM
Sbjct: 555 SGLRVIDGSTLFRSPGTNPQATVMMM 580
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 56.0 bits (129), Expect = 8e-08
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 292 EVIVSAGTFNSPKLLMLSGIGPAEELQKFGIDVIKDLP-VGKDMQDH 337
EVI+SAG+ SP+LL+LSGIGPA +L GI V D+P VGK M D+
Sbjct: 301 EVILSAGSLGSPQLLLLSGIGPANDLTSLGIPVFADVPDVGKHMFDN 347
Score = 43.2 bits (97), Expect = 6e-04
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 432 PESRGYVKLRSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSSYFREINAEVADP 491
P S G + L S++P + P + ++ S +D ++ V S+ + +
Sbjct: 419 PLSEGSLWLTSSNPLESPSVRFNYLSRREDLARCVTGMRRVAKVLESTTMDVFRSAMGSL 478
Query: 492 GLDEC--------GEMSLD---NEDYLECYIKGMTVTIFHQTSTCAMGSVVDSNMQVYGV 540
D + +D N+ L + + T++H C GSVVD + +V+ V
Sbjct: 479 SQDSRRREFRIVGAALPVDWRTNDTALGDFCQQTVATLWHYHGGCVAGSVVDRDFRVFRV 538
Query: 541 ENLRVIDASTMPNITRANTLAASIMM 566
LRV+D ST N A +MM
Sbjct: 539 RALRVVDGSTFRETPGTNPQATIMMM 564
Score = 30.3 bits (65), Expect = 4.4
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 43 DCFDFIVIGSGV-GAVIANRLTENEDVRVLLIEAGKNPSVESMLP--GLFILLQNSYQDW 99
+ +D+IV+G G G +A L RVL++E G P+ L G F+ + D
Sbjct: 53 EAYDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGFVRTL-AMADP 111
Query: 100 NYVSEPEEATKNQQVGAYRTSAGKCLGGSSNINHFIHLRGDPCDFDSWAAYLKDESWSYK 159
S+ T + G A + LGG+++IN + R P F S + +W K
Sbjct: 112 APESDAPAQTFASEDGVPNVRA-RVLGGATSINAGFYSRAHPDWFRSHGEGGEAMNWDMK 170
Query: 160 NV 161
V
Sbjct: 171 LV 172
>10_08_0354 -
17104223-17106061,17106770-17106794,17107317-17107561,
17108432-17108677
Length = 784
Score = 35.9 bits (79), Expect = 0.089
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 37/279 (13%)
Query: 46 DFIVIGSGVGAVIANRLTENEDVRVLLIEAGKNPSVESMLPGLFILLQNSYQDWNYVSEP 105
D +V+GSG G +A + + +V+++E G + + L+ + Y +
Sbjct: 262 DAVVVGSGCGGGVAAAVLASAGYKVVVVEKGDYFAARD-----YSSLEGPTMERLYENGG 316
Query: 106 EEATKNQQVGAYRTSAGKCLGGSSNINHFIHLRGDPCDFDSWAAYLKDESWSYKNVLPYF 165
+T N + AG +GG S +N +R + A L++ WS + LP F
Sbjct: 317 VFSTANVTTTMF---AGATVGGGSAVNWSACIR-------TPANVLQE--WSNDHGLPLF 364
Query: 166 RKSETVQDEDILKYYANFHGVDGPVIITRQPDDSTRNIMESFEEIGVPSVLDLNTNNTVG 225
VQ D + A GV G R+ + + E +G+ V ++ N++ G
Sbjct: 365 GGQGYVQAMDAV--CARL-GVTGR---CREEGFQNKAVRRGCEALGL-RVEAVSRNSSEG 417
Query: 226 FTESSFIIG--NGRRQSTSQAYLNNLKRDNLYVLTETVAEKIIFEDNV---------AVG 274
S +G G ++ T +L + +LT AE+ I E N VG
Sbjct: 418 HFCGSCNLGCPTGEKRGTDTTWLVDAVGRGAVILTGCKAERFILETNTGGGGGRRKKCVG 477
Query: 275 VILR-LGSGEKITVYANREVIVSA-GTFNSPKLLMLSGI 311
V+ + LG G + +V VSA G +P LL SG+
Sbjct: 478 VVAKCLGKGITKKLRIEAKVSVSACGALMTPPLLRNSGL 516
>09_06_0367 + 22601881-22602097,22602212-22603254
Length = 419
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 237 RRQSTSQAYLNNLKRDN----LYVLTETVAEKIIFEDNVAVGVILRLGSGEKIT--VYAN 290
++ S+ L RDN + ++ E VAE + + IL++G G K+T +
Sbjct: 41 KKNLASERSLGGSSRDNNSNLVNLVNEIVAESVTYRHKRVADEILKIGKG-KVTARAFTY 99
Query: 291 REVIVSAGTFNSPKLLMLSGIGP 313
E+ + G F + LL G GP
Sbjct: 100 GELSEATGGFRAESLLGEGGFGP 122
>01_01_0430 + 3258438-3259200,3259929-3261454
Length = 762
Score = 30.7 bits (66), Expect = 3.3
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 471 HFLTVYNSSYFREINAEVADPGL-DECGEMSLDNED 505
HFLT++NSS+ R NA + P L +EC S +E+
Sbjct: 696 HFLTLHNSSFIR--NAGLCGPPLSNECSNKSTSSEE 729
>04_04_0299 -
24243364-24244259,24244417-24244428,24245092-24245193,
24245298-24245340
Length = 350
Score = 30.3 bits (65), Expect = 4.4
Identities = 24/126 (19%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 150 YLKDESWSYKNVLPYFRKSETVQDEDILKYYANFHGVDGPVIITRQPDDSTRNIMESF-- 207
+LKD W + L T + + Y G+DG +I+T S ++ +
Sbjct: 166 FLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQIAGIDGAIIVTTPQQVSLIDVKKEINF 225
Query: 208 -EEIGVP--SVLDLNTNNTVGFTESSFIIGNGRRQSTSQAYLNNLKRDNLYVLTETVAEK 264
+++GVP V++ + F++ F+ + ++ + + N ++ L VA
Sbjct: 226 CKKVGVPVLGVVENMSGLRQAFSDMKFVKPSEAGETDATEWALNYIKEKAPELLSVVACS 285
Query: 265 IIFEDN 270
+F+ +
Sbjct: 286 EVFDSS 291
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 29.9 bits (64), Expect = 5.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 42 GDCFDFIVIGSGVGAVIANRLTENEDVRVLLIE 74
G +D IV+GSG+G ++A + RVL++E
Sbjct: 66 GGEYDAIVVGSGIGGMVAATQLAAKGARVLVLE 98
>01_04_0074 + 15760667-15761815
Length = 382
Score = 29.9 bits (64), Expect = 5.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 124 CLGGSSNINHFIHLRGDPCDFDSWAAYLKDESWSYKNVL 162
CLG SS I H++ D C + W + + WS + L
Sbjct: 257 CLGESSGILHYMQPNYDGCWLNVWRLESRHQQWSMTHSL 295
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 29.5 bits (63), Expect = 7.7
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 172 QDEDILKYYANFHGVDGPVIITRQPDDSTRNIMESFEEIGVPSVLDLNTNNTVGFTESSF 231
++ + KYY H V+ V TRQP + ++ +G+ +L L N G
Sbjct: 932 ENTSVNKYYTLAHAVNERV--TRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEM 989
Query: 232 IIGNGRRQSTSQAYLNNLK 250
+G + + AYL K
Sbjct: 990 GLGKTVQVMSLIAYLMEFK 1008
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,637,271
Number of Sequences: 37544
Number of extensions: 727726
Number of successful extensions: 1344
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1322
Number of HSP's gapped (non-prelim): 25
length of query: 580
length of database: 14,793,348
effective HSP length: 86
effective length of query: 494
effective length of database: 11,564,564
effective search space: 5712894616
effective search space used: 5712894616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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