GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000068-TA|BGIBMGA000068-PA|IPR000172|Glucose-methanol-
choline oxidoreductase, N-terminal, IPR007867|Glucose-methanol-choline
oxidoreductase, C-terminal, IPR012132|Glucose-methanol-choline
oxidoreductase
         (580 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.78 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   2.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   4.2  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.78
 Identities = 16/61 (26%), Positives = 29/61 (47%)

Query: 452 SQSFYSNAKDFDNMKKYVKHFLTVYNSSYFREINAEVADPGLDECGEMSLDNEDYLECYI 511
           ++S Y  A+ F   + Y + F   Y S+ F  +N  +   GL +      D+E+  +C+ 
Sbjct: 305 AESCYQLARAFHVQRDYDQAFQYYYQSTQFAPVNFVLPHFGLGQMYIYRGDSENAAQCFE 364

Query: 512 K 512
           K
Sbjct: 365 K 365


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 103 SEPEEATKNQQVGAYRTSAGKCLGGSSNI 131
           S P   T+N  +  YR+++  C GG++ I
Sbjct: 76  SPPTPPTRNGTIFRYRSNSASCTGGAAPI 104



 Score = 25.8 bits (54), Expect = 3.2
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 114  VGAY-RTSAGKCLG-GSSNINHFIHLRGDPCDFDSWAAYLKDESW--SYKNVLPYF 165
            VGA  R S G C    SS+ NH  H         SWA   K ES    Y + +P F
Sbjct: 1079 VGALNRCSNGSCSSTSSSHSNHSSHSSSSSNSAGSWAGMGKQESHYVMYPSNVPVF 1134


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 202  NIMESFEEIGVPSVLDLNTNNTVGFTESSF 231
            N +  +E+ G+  V   NT+N +G TE  +
Sbjct: 3086 NTITCYEQHGLSYVFPHNTSNIIGITEDHY 3115


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,318
Number of Sequences: 2123
Number of extensions: 26558
Number of successful extensions: 98
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94
Number of HSP's gapped (non-prelim): 4
length of query: 580
length of database: 516,269
effective HSP length: 68
effective length of query: 512
effective length of database: 371,905
effective search space: 190415360
effective search space used: 190415360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)