Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000068-TA|BGIBMGA000068-PA|IPR000172|Glucose-methanol-
choline oxidoreductase, N-terminal, IPR007867|Glucose-methanol-choline
oxidoreductase, C-terminal, IPR012132|Glucose-methanol-choline
oxidoreductase
(580 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 208 8e-54
AF003384-6|AAB54238.2| 451|Caenorhabditis elegans Coenzyme q (u... 35 0.18
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 32 1.3
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 32 1.3
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 31 3.0
AF040653-9|AAB95029.1| 580|Caenorhabditis elegans Hypothetical ... 31 3.0
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 30 3.9
L16560-5|AAA27996.1| 443|Caenorhabditis elegans Hypothetical pr... 30 3.9
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 29 9.0
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 29 9.0
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 208 bits (508), Expect = 8e-54
Identities = 162/567 (28%), Positives = 272/567 (47%), Gaps = 54/567 (9%)
Query: 48 IVIGSG-VGAVIANRLTENEDVRVLLIEAGK-----NPSVESMLPGLFILLQNSYQDWNY 101
I++G+G G V+ANRLTE+ RVLLIEAG + + ++ L ++Y +W+Y
Sbjct: 41 IIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTY-NWHY 99
Query: 102 VSEPEEATKNQQVGAYRTSAGKCLGGSSNINHFIHLRGDPCDFDSWAAYLKDESWSYKNV 161
+ A KN + G+ GGSS +N ++RG D++ W W+Y N
Sbjct: 100 HTT---AQKNLGNRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKE-GASGWNYANC 155
Query: 162 LPYFRKSETVQDEDILKYYANFHGVDGPVIITRQPDDSTRNIMESFEEIGVPSVL----D 217
LPYF+K+ET D + G +GP+ + + D+ + +++ +G L D
Sbjct: 156 LPYFKKAETYSDATGPN--DPYRGNNGPLYVKK--GDAENPLHKAWLNVGKEHPLGWTND 211
Query: 218 LNTNNTVGFTESSFIIGNGRRQSTSQAYLNNLK-RDNLYVLTETVAEKIIFEDNVAVGV- 275
+N G + I NG R S S+AY++ ++ R NL + +++F+ N A+G+
Sbjct: 212 MNGEKQEGISTMDMTIHNGERWSASKAYVHPIRNRPNLITSSGITCTRVLFDTNKAIGIE 271
Query: 276 -ILRLG--------SGEKITVYANREVIVSAGTFNSPKLLMLSGIGPAEELQKFGIDVIK 326
I +L S + +Y +VI++ G N+P+LLMLSG+GPA+ L+ I ++
Sbjct: 272 FIRKLNFVGTDSIDSYSREKIYCQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVA 331
Query: 327 DLP-VGKDMQDHFAVLLLNKLERSIEISQIPQLTRLAFPVLLG---GINLDGSKCCPDYQ 382
+LP VG+++QDH + + + + + + + +G N G +
Sbjct: 332 NLPGVGQNLQDHLEIYVQQESTQPVTLYNKSSWKFPHNMIKIGLEWFTNRTGLGASSHLE 391
Query: 383 IIGLKFTHDT-PYFLLTCTVLFGLKHEICSKLNAETIGRNH-LVTFIGAFHPESRGYVKL 440
G + DT + + L H+ + T G H +G +S+GY+ L
Sbjct: 392 TGGFARSDDTVTHPDIQFHFLPSTVHD-----DGRTNGTCHGYQVHVGPMRSQSKGYIML 446
Query: 441 RSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSSYFREINAEVADPGLDECGEMS 500
++ DP PII+ ++ D+ +K ++ ++ S F E + PG D +
Sbjct: 447 QAKDPRRAPIINPNYMEEDSDWREFRKCIRVSRELFASKAFDEFRGKELAPGPDCQSDAD 506
Query: 501 LDNEDYLECYIKGMTVTIFHQTSTCAMGSVVD-------SNMQVYGVENLRVIDASTMPN 553
+D ++K + +H + TC MGS D M VYG ENL+V+DAS MP+
Sbjct: 507 IDR------FVKEKAASAYHPSCTCKMGSENDKMAVVNPETMGVYGTENLKVVDASVMPS 560
Query: 554 ITRANTLAASIMMAEKMSDVIKNKYNL 580
I N A IMMAE+ +D+IK+K L
Sbjct: 561 IVSGNLNAPVIMMAERAADLIKHKKQL 587
>AF003384-6|AAB54238.2| 451|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 6 protein.
Length = 451
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 40 NDGDCFDFIVIGSG-VGAVIANRLTENEDVR---VLLIEAGKNPSVESMLPG 87
N +D +++G G VG +A L N+ + VLL++AG++PS+ S PG
Sbjct: 13 NASSYYDTVIVGGGMVGNAMACSLGANKSFQSKSVLLLDAGRSPSLASFKPG 64
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 133 HFIHLRGDPCDFDSWAAYLKDESWSYKNVLPYFRKSETVQDEDILKYYANFHGVDGPVII 192
H ++L DP + YLK+ S + R + E IL+ + F DG V +
Sbjct: 466 HLVNLNEDPLMSECLIYYLKEGVTSVGRPVAEHRPDILLSGEAILELHCEFINEDGNVTL 525
Query: 193 TRQPDDS 199
T +P+ S
Sbjct: 526 TMKPNAS 532
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 133 HFIHLRGDPCDFDSWAAYLKDESWSYKNVLPYFRKSETVQDEDILKYYANFHGVDGPVII 192
H ++L DP + YLK+ S + R + E IL+ + F DG V +
Sbjct: 466 HLVNLNEDPLMSECLIYYLKEGVTSVGRPVAEHRPDILLSGEAILELHCEFINEDGNVTL 525
Query: 193 TRQPDDS 199
T +P+ S
Sbjct: 526 TMKPNAS 532
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 45 FDFIVIGSGVGAVIANRLTENEDVRVLLIEAGK 77
FD++VIG G G + + R V V LIE+G+
Sbjct: 7 FDYLVIGGGSGGIASARRAREFGVSVGLIESGR 39
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 45 FDFIVIGSGVGAVIANRLTENEDVRVLLIEAGK 77
FD++VIG G G + + R V V LIE+G+
Sbjct: 21 FDYLVIGGGSGGIASARRAREFGVSVGLIESGR 53
>AF040653-9|AAB95029.1| 580|Caenorhabditis elegans Hypothetical
protein K05F6.1 protein.
Length = 580
Score = 30.7 bits (66), Expect = 3.0
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 427 IGAFHPESR-GYVKLRSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSSYFREIN 485
IG SR G V + + N D F +A FD K ++KHFL ++ S ++
Sbjct: 29 IGYIEGLSRPGNVFYQFQNGNIDIWAESKFRFSAPQFD-AKSWLKHFLYIFRISRIATLH 87
Query: 486 AEVADPGLDE 495
++D GL+E
Sbjct: 88 LTLSDGGLNE 97
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 133 HFIHLRGDPCDFDSWAAYLKDESWSYKNVLPYFRKSETVQDEDILKYYANFHGVDGPVII 192
H ++L DP + YLK+ S R + E IL+ + F DG V +
Sbjct: 466 HLVNLNEDPLMSECLIYYLKEGVTSVGRPEAEHRPDILLSGEAILELHCEFINEDGNVTL 525
Query: 193 TRQPDDS 199
T +P+ S
Sbjct: 526 TMKPNAS 532
>L16560-5|AAA27996.1| 443|Caenorhabditis elegans Hypothetical
protein D2007.5 protein.
Length = 443
Score = 30.3 bits (65), Expect = 3.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 193 TRQPDDSTRNIMESFEEIGVPSVLDLNTNN--TVGFTESSFIIGNGRRQSTSQAYLNNLK 250
T D ++ S+EE PS+ DL ++ V +S++ NG ++++S LN+ K
Sbjct: 265 TSSEDSRHSDVQNSYEEDHKPSLADLRNHSFPFVNLLQSAYNPANGTKKNSSSTCLNSPK 324
>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical
protein R08E3.1b protein.
Length = 1465
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 387 KFTHDTPYFLLTCTVLFGLKH-EICSKLNAETIGRNHLVTFIGA 429
K+ +T + C++ GL H +I LN ETI R +T +GA
Sbjct: 466 KYYANTKNYAWACSISGGLYHFKIDRVLNGETISRTFPITCLGA 509
>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical
protein R08E3.1a protein.
Length = 1512
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 387 KFTHDTPYFLLTCTVLFGLKH-EICSKLNAETIGRNHLVTFIGA 429
K+ +T + C++ GL H +I LN ETI R +T +GA
Sbjct: 466 KYYANTKNYAWACSISGGLYHFKIDRVLNGETISRTFPITCLGA 509
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,563,989
Number of Sequences: 27539
Number of extensions: 650095
Number of successful extensions: 1423
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1409
Number of HSP's gapped (non-prelim): 12
length of query: 580
length of database: 12,573,161
effective HSP length: 85
effective length of query: 495
effective length of database: 10,232,346
effective search space: 5065011270
effective search space used: 5065011270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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