Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000067-TA|BGIBMGA000067-PA|IPR007110|Immunoglobulin-
like, IPR003599|Immunoglobulin subtype, IPR003598|Immunoglobulin
subtype 2, IPR013098|Immunoglobulin I-set, IPR013151|Immunoglobulin
(397 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 43 5e-06
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 38 1e-04
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 35 0.001
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 6.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 8.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 8.0
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 42.7 bits (96), Expect = 5e-06
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 212 KNVTLTCEVVSGNPPTLDEVIWYLDGEVLKHLPDCNGTDGDENLCNEVDPSMLLLQDTTK 271
+ TLTC V G+ P + W DG + + T+ D+ S+L+++ +
Sbjct: 626 ERTTLTCSVTRGDLPL--SISWLKDGRAMGPSERVHVTNMDQY------NSILMIEHLSP 677
Query: 272 SFHGNYSCKGKNFAGWGDVSEKTELVVNSPP 302
+GNYSC +N A +VS LVV+ PP
Sbjct: 678 DHNGNYSCVARNLA--AEVSHTQRLVVHVPP 706
Score = 36.7 bits (81), Expect = 3e-04
Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Query: 28 FHCEAANEVTIETKDHPMHATRELEIWYPPIVRVEPKNITVIEGSKLLLKCEYESNPSSL 87
+ C A N+ + H + ++ + PP + + + G + L C L
Sbjct: 587 YTCSARNK-----QGHSARRSGDVAVIVPPKISPFTADRDLHLGERTTLTCSVTRGDLPL 641
Query: 88 SAVFWFRDGERVNVNDTAHYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGNGTSEDNI 147
S + W +DG + ++ H L+I + GNY+C+ N + +
Sbjct: 642 S-ISWLKDGRAMGPSERVHVTNMDQYNSILMIEHLSPDHNGNYSCVARNLAAEVSHTQRL 700
Query: 148 VVNVLCEWL 156
VV+V W+
Sbjct: 701 VVHVPPRWI 709
Score = 32.7 bits (71), Expect = 0.006
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 92 WFR-DGERVNVNDTAHYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGNGTSEDNIVVN 150
W++ GE++ + T + Q L++ N + D G+YTC + N+ GN + V
Sbjct: 1341 WYKGQGEQIRTDSTRNIQ--ILPSGELMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQ 1398
Query: 151 V 151
V
Sbjct: 1399 V 1399
Score = 32.3 bits (70), Expect = 0.007
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 48 TRELEIWYPPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFW-----FRDGERVNVN 102
T+ L + PP VEP +++V + L C+ + P+ + W + GE +
Sbjct: 697 TQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPT--PTIVWKKATGSKSGEYEELR 754
Query: 103 DTAHYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGNG 141
+ A+ + +L++ + + G Y C +N +G+G
Sbjct: 755 ERAYTK--ILSNGTLLLQHVKEDREGFYLCQASNGIGSG 791
Score = 28.7 bits (61), Expect = 0.092
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 264 LLLQDTTKSFHGNYSCKGKNFAGWGDVSEKTELVVNSPPSF 304
LLLQ + G Y C+ N G G + + +L VNS P F
Sbjct: 767 LLLQHVKEDREGFYLCQASNGIGSG-IGKVVQLKVNSSPYF 806
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 38.3 bits (85), Expect = 1e-04
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 23 ENGQK-FHCEAANEVTIETKDHPMHATRELEIWYPPIVRVEPK--NITVIEG------SK 73
E+G K + C + +T ET+ + AT+ + P+ V PK ++ I G +
Sbjct: 173 EDGYKTYQCRTKHRLTGETR---LSATKGRLVITEPVGSVRPKFPSMDNINGLSTESKAD 229
Query: 74 LLLKCEYESNPSSLSAVFWFRDG----ERVNVNDTAHYQGGTTDQHSLIIMNARGVDMGN 129
L L C + P + + F +G + V +N+ GT LII AR D G
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNERVRQVSGT-----LIIREARVEDSGK 284
Query: 130 YTCLLTNSVGNGTSEDNIVV 149
Y C++ NSVG + E + V
Sbjct: 285 YLCIVNNSVGGESVETVLTV 304
Score = 35.1 bits (77), Expect = 0.001
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 15 LTIEATRFENGQKFHCEAANEVTIETKDHPMHATRELEI---WYPPIVRVEPKNITVIEG 71
L IE+ + E+ + C N+ AT EL++ + PP +R T+ G
Sbjct: 355 LRIESVKKEDKGMYQCFVRND------QESAQATAELKLGGRFEPPQIRQAFAEETLQPG 408
Query: 72 SKLLLKCEYESNPSSLSAVFWFRDGERVNVND---TAHYQGGTTDQHS-LIIMNARGVDM 127
+ LKC NP+ + W DG+R++ + Y D S L I + D
Sbjct: 409 PSMFLKCVASGNPT--PEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDG 466
Query: 128 GNYTCLLTNSVGN 140
G Y C+ + VG+
Sbjct: 467 GLYKCIAASKVGS 479
Score = 33.9 bits (74), Expect = 0.002
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 18/148 (12%)
Query: 15 LTIEATRFENGQKFHCEAANEVTIETKDHPMHATRELEIWYPPIVRVEPKNITVIEGSKL 74
L+I + N + CEA N + + A + + PP ++ KN T G
Sbjct: 740 LSINNIQKTNEGYYLCEAVNGIGAG-----LSAVIFISVQAPPHFEIKLKNQTARRGEPA 794
Query: 75 LLKCEYESNPSSLSAVFWFRDGERVNVNDTAHY--------QGGTTDQHSLIIMNARGVD 126
+L+CE + + W + +R++ + Y G +D L I D
Sbjct: 795 VLQCEAQGEKPI--GILWNMNNKRLDPKSDSRYTIREEILANGVLSD---LSIKRTERSD 849
Query: 127 MGNYTCLLTNSVGNGTSEDNIVVNVLCE 154
+TC+ TN+ G+ + N++V + E
Sbjct: 850 SALFTCVATNAFGSDDTSINMIVQEVPE 877
Score = 31.1 bits (67), Expect = 0.017
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 262 SMLLLQDTTKSFHGNYSCKGKNFAGWGDVSEKTELVVNSPP 302
SML++ T G Y C +N A G S T L VN PP
Sbjct: 641 SMLMISVITARHAGEYVCTAENAA--GTASHSTTLTVNVPP 679
Score = 28.7 bits (61), Expect = 0.092
Identities = 23/123 (18%), Positives = 48/123 (39%), Gaps = 4/123 (3%)
Query: 36 VTIETKDHPMHATRELEIWYPPIVR-VEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFR 94
V + + T E+++ PP ++ + + G L+C + L+ + W
Sbjct: 562 VARNAQGYSARGTLEVQVMVPPTIQQFSFTKLPMNAGEFANLQCIVPTGDLPLN-IRWSY 620
Query: 95 DGERVNVNDTAHYQGGTTDQHSLIIMNA-RGVDMGNYTCLLTNSVGNGTSEDNIVVNVLC 153
GE + + D+ S+++++ G Y C N+ G + + VNV
Sbjct: 621 PGEEMG-GSSGVLAKKVADRVSMLMISVITARHAGEYVCTAENAAGTASHSTTLTVNVPP 679
Query: 154 EWL 156
W+
Sbjct: 680 RWI 682
Score = 27.1 bits (57), Expect = 0.28
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 116 SLIIMNARGVDMGNYTCLLTNSVGNGTSEDNIVVN 150
SL I D G Y+C + N+ G+ T ++V+
Sbjct: 1330 SLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVH 1364
Score = 23.8 bits (49), Expect = 2.6
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 56 PPIVRVEPKNITVIEGSKLLLKCEYESNPSSLSAVFWFR-DGERV 99
P V+ P + G+ +++C+ NP + W R DG V
Sbjct: 3 PVFVKEPPNRVDFSNGTGAVVECQARGNPQ--PDIIWVRADGSAV 45
Score = 22.6 bits (46), Expect = 6.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 359 YLCFANNSVG 368
YLC NNSVG
Sbjct: 285 YLCIVNNSVG 294
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 34.7 bits (76), Expect = 0.001
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Query: 13 SNLTIEATRFENGQKFHCEAANEVTIETKDHPMHATRELEIWYPPIVRVEPKNITVIEGS 72
S L+I E+ + C AAN + T +L++ PP VEP +++V
Sbjct: 672 SLLSITNLAAEHSGDYTCVAANPAA------EVRYTAKLQVKVPPRWIVEPTDVSVERNK 725
Query: 73 KLLLKCEYESNPSSLSAVFW-----FRDGERVNVNDTAHYQGGTTDQHSLIIMNARGVDM 127
+ L C+ + P+ + W + GE + + A+ + +L++ + +
Sbjct: 726 HVALHCQAQGVPT--PTIVWKKATGSKSGEYEELRERAYTK--ILSNGTLLLQHVKEDRE 781
Query: 128 GNYTCLLTNSVGNG 141
G Y C +N +G+G
Sbjct: 782 GFYLCQASNGIGSG 795
Score = 32.7 bits (71), Expect = 0.006
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 92 WFR-DGERVNVNDTAHYQGGTTDQHSLIIMNARGVDMGNYTCLLTNSVGNGTSEDNIVVN 150
W++ GE++ + T + Q L++ N + D G+YTC + N+ GN + V
Sbjct: 1345 WYKGQGEQIRTDSTRNIQ--ILPSGELMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQ 1402
Query: 151 V 151
V
Sbjct: 1403 V 1403
Score = 28.7 bits (61), Expect = 0.092
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 264 LLLQDTTKSFHGNYSCKGKNFAGWGDVSEKTELVVNSPPSF 304
LLLQ + G Y C+ N G G + + +L VNS P F
Sbjct: 771 LLLQHVKEDREGFYLCQASNGIGSG-IGKVVQLKVNSSPYF 810
Score = 27.1 bits (57), Expect = 0.28
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 28 FHCEAANEVTIETKDHPMHATRELEIWYPPIVRVEPKNITVIEGSKLLLKCEYESNPSSL 87
+ C A N+ + H + ++ + PPI+ + EG + C + L
Sbjct: 587 YTCSARNK-----QGHSARRSGDVAVIVPPIIEPFTFQEGLSEGMRTRTVCGVAAGDPPL 641
Query: 88 SAVFWFRDGERVNV--NDTAHYQGGTTDQHS--LIIMNARGVDMGNYTCLLTNSVGNGTS 143
+ + W +DG+ + A D +S L I N G+YTC+ N
Sbjct: 642 T-ISWLKDGQSPFPLPPNLASANISQLDPYSSLLSITNLAAEHSGDYTCVAANPAAEVRY 700
Query: 144 EDNIVVNVLCEWL 156
+ V V W+
Sbjct: 701 TAKLQVKVPPRWI 713
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.6 bits (46), Expect = 6.0
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 FKTISNLTIEATRFENGQKFHC-EAANEVTIE 39
F + +E R ENG++F C +E+T++
Sbjct: 157 FNANARSVVEKMRKENGKEFDCHNYMSELTVD 188
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 8.0
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 279 CKGKNFAGWGDVSEKTELVVNSPPSFQYA 307
C+ + +G + E V+ SPP+F ++
Sbjct: 450 CEDLSVSGEAGIEEVKSPVLRSPPAFSHS 478
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 8.0
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 279 CKGKNFAGWGDVSEKTELVVNSPPSFQYA 307
C+ + +G + E V+ SPP+F ++
Sbjct: 450 CEDLSVSGEAGIEEVKSPVLRSPPAFSHS 478
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.133 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,930
Number of Sequences: 429
Number of extensions: 5875
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 22
length of query: 397
length of database: 140,377
effective HSP length: 59
effective length of query: 338
effective length of database: 115,066
effective search space: 38892308
effective search space used: 38892308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)
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