GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000066-TA|BGIBMGA000066-PA|IPR001515|Ribosomal protein
L32e
         (134 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   0.66 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   4.6  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    23   4.6  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         22   8.1  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 73  FRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 129
           ++KV+    KE E+L  Q R++   + +G  SKK     E   Q +IR    A RLR
Sbjct: 87  WKKVVSPAEKETEVLCQQEREFREYLRNG--SKKMTSTWENTVQ-NIRDKKEAERLR 140


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 16  TKRFIRHQSDRYDKLKRNWRKPRGIDNR 43
           T R +RH+  R    KR  +  +G D R
Sbjct: 517 TTRPVRHRPTRRKSTKRGKKDDKGYDRR 544


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 47  RFKGQYLMPNIGYGSNKKTRHMLPNGFRKVL 77
           R  G Y          K+TR  LP+G +KVL
Sbjct: 128 RTSGNYASVIAHNPDTKRTRVKLPSGAKKVL 158


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 63  KKTRHMLPNGFRKVLVHNVKE 83
           K TR M+P     ++++N K+
Sbjct: 114 KTTRDMVPKAIMMLIINNTKD 134


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.136    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,522
Number of Sequences: 2123
Number of extensions: 5140
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 134
length of database: 516,269
effective HSP length: 58
effective length of query: 76
effective length of database: 393,135
effective search space: 29878260
effective search space used: 29878260
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 44 (21.8 bits)