Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000066-TA|BGIBMGA000066-PA|IPR001515|Ribosomal protein
L32e
(134 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 264 3e-73
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 26 0.16
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 26 0.16
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 26 0.16
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 26 0.16
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 26 0.16
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 0.86
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 8.0
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 264 bits (646), Expect = 3e-73
Identities = 124/134 (92%), Positives = 129/134 (96%)
Query: 1 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 60
MAIRPVYRPTIVKKRTK+FIRHQSDRY KLKRNWRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MAIRPVYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 61 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 120
SNKKTRHMLP GFRKVLVHNVKELE+LMMQNRK+CAEIAHG SSKKRK IVERAQQLSIR
Sbjct: 61 SNKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIR 120
Query: 121 VTNAAARLRSQENE 134
VT A+ARLRSQENE
Sbjct: 121 VTYASARLRSQENE 134
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.8 bits (54), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 13 KKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 72
++R K+ ++++ Y K R K R D + R R K P I + KT H N
Sbjct: 43 REREKKSYKNENS-YRKY-RETSKERSRDRKERERSKE----PKIISSLSNKTIHNNNNN 96
Query: 73 FRKVLVHNVKELE 85
++K+ +N+ +E
Sbjct: 97 YKKLQYYNINYIE 109
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.8 bits (54), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 13 KKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 72
++R K+ ++++ Y K R K R D + R R K P I + KT H N
Sbjct: 43 REREKKSYKNENS-YRKY-RETSKERSRDRKERERSKE----PKIISSLSNKTIHNNNNN 96
Query: 73 FRKVLVHNVKELE 85
++K+ +N+ +E
Sbjct: 97 YKKLQYYNINYIE 109
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 25.8 bits (54), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 13 KKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 72
++R K+ ++++ Y K R K R D + R R K P I + KT H N
Sbjct: 43 REREKKSYKNENS-YRKY-RETSKERSRDRKERERSKE----PKIISSLSNKTIHNNNNN 96
Query: 73 FRKVLVHNVKELE 85
++K+ +N+ +E
Sbjct: 97 YKKLQYYNINYIE 109
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.8 bits (54), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 13 KKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 72
++R K+ ++++ Y K R K R D + R R K P I + KT H N
Sbjct: 43 REREKKSYKNENS-YRKY-RETSKERSRDRKERERSKE----PKIISSLSNKTIHNNNNN 96
Query: 73 FRKVLVHNVKELE 85
++K+ +N+ +E
Sbjct: 97 YKKLQYYNINYIE 109
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.8 bits (54), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 13 KKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 72
++R K+ ++++ Y K R K R D + R R K P I + KT H N
Sbjct: 276 REREKKSYKNENS-YRKY-RETSKERSRDRKERERSKE----PKIISSLSNKTIHNNNNN 329
Query: 73 FRKVLVHNVKELE 85
++K+ +N+ +E
Sbjct: 330 YKKLQYYNINYIE 342
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.4 bits (48), Expect = 0.86
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 53 LMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVE 112
L + G + + +P+G+ + + EL L + + + + HG+ R LIV+
Sbjct: 66 LAAKVWNGQYARVQQSMPDGWETEISDQMLELRDLPISGKPFQIRMKHGLI---RDLIVD 122
Query: 113 R 113
R
Sbjct: 123 R 123
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 8.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 101 GVSSKKRKLIVERAQQLSIR 120
G KK+K + AQ LSIR
Sbjct: 89 GAKQKKKKRSLMGAQGLSIR 108
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.323 0.136 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,288
Number of Sequences: 429
Number of extensions: 1761
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 134
length of database: 140,377
effective HSP length: 52
effective length of query: 82
effective length of database: 118,069
effective search space: 9681658
effective search space used: 9681658
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)
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