Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000065-TA|BGIBMGA000065-PA|IPR001216|Cysteine
synthase/cystathionine beta-synthase P-phosphate-binding site,
IPR001926|Pyridoxal-5'-phosphate-dependent enzyme, beta subunit
(440 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine (thi... 171 6e-43
At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine (thi... 171 6e-43
At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putat... 171 8e-43
At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putat... 170 1e-42
At3g04940.1 68416.m00536 cysteine synthase, putative / O-acetyls... 169 3e-42
At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putat... 166 3e-41
At2g43750.1 68415.m05439 cysteine synthase, chloroplast / O-acet... 163 2e-40
At5g28020.2 68418.m03375 cysteine synthase, putative / O-acetyls... 155 6e-38
At5g28020.1 68418.m03374 cysteine synthase, putative / O-acetyls... 155 6e-38
At5g28030.2 68418.m03377 cysteine synthase, putative / O-acetyls... 154 1e-37
At5g28030.1 68418.m03376 cysteine synthase, putative / O-acetyls... 154 1e-37
At3g61440.1 68416.m06881 cysteine synthase, putative / O-acetyls... 148 8e-36
At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putativ... 144 8e-35
At3g22460.1 68416.m02839 cysteine synthase, putative / O-acetyls... 114 1e-25
At1g55880.2 68414.m06409 pyridoxal-5'-phosphate-dependent enzyme... 99 3e-21
At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme... 99 3e-21
At3g10050.1 68416.m01205 threonine ammonia-lyase / threonine deh... 43 4e-04
At4g11640.1 68417.m01861 serine racemase, putative similar to se... 42 0.001
At5g38530.1 68418.m04659 tryptophan synthase-related low similar... 34 0.16
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 33 0.50
At5g47140.1 68418.m05811 zinc finger (GATA type) family protein ... 29 6.2
At3g05610.1 68416.m00623 pectinesterase family protein contains ... 29 6.2
At2g36540.1 68415.m04482 NLI interacting factor (NIF) family pro... 29 6.2
At5g58730.1 68418.m07357 pfkB-type carbohydrate kinase family pr... 29 8.1
>At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 171 bits (417), Expect = 6e-43
Identities = 105/313 (33%), Positives = 163/313 (52%), Gaps = 8/313 (2%)
Query: 10 NRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKS 69
+RI ++ E IG+TPLV LN + + G + AK E + P S+KDRI ++M+ +A+K
Sbjct: 3 SRIAKDVTELIGNTPLVYLNNVAE--GCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKK 60
Query: 70 GIAKSGTR-FIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTP 128
G+ K G IEPTSGNTG+G+A A G+ I P S E+ + G E+V T
Sbjct: 61 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTD 120
Query: 129 AMAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEIL-ALVPDVDMIX 187
P + + ++ A+ L + PN Q++N NP+ HYE T EI +D
Sbjct: 121 ---PAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFV 177
Query: 188 XXXXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDK 247
+ +KE+ + V+P S I G + ++GIG F+P VL+
Sbjct: 178 SGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNV 237
Query: 248 SVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILP 307
+ID+V + + ++ +M+R++ KEGLL G SSGAA +AI+ A++ AGK V I P
Sbjct: 238 DLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPE-NAGKLFVAIFP 296
Query: 308 DGIRNYMTKFVCD 320
Y++ + D
Sbjct: 297 SFGERYLSTVLFD 309
>At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 171 bits (417), Expect = 6e-43
Identities = 105/313 (33%), Positives = 163/313 (52%), Gaps = 8/313 (2%)
Query: 10 NRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKS 69
+RI ++ E IG+TPLV LN + + G + AK E + P S+KDRI ++M+ +A+K
Sbjct: 3 SRIAKDVTELIGNTPLVYLNNVAE--GCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKK 60
Query: 70 GIAKSGTR-FIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTP 128
G+ K G IEPTSGNTG+G+A A G+ I P S E+ + G E+V T
Sbjct: 61 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTD 120
Query: 129 AMAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEIL-ALVPDVDMIX 187
P + + ++ A+ L + PN Q++N NP+ HYE T EI +D
Sbjct: 121 ---PAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFV 177
Query: 188 XXXXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDK 247
+ +KE+ + V+P S I G + ++GIG F+P VL+
Sbjct: 178 SGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNV 237
Query: 248 SVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILP 307
+ID+V + + ++ +M+R++ KEGLL G SSGAA +AI+ A++ AGK V I P
Sbjct: 238 DLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPE-NAGKLFVAIFP 296
Query: 308 DGIRNYMTKFVCD 320
Y++ + D
Sbjct: 297 SFGERYLSTVLFD 309
>At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 433
Score = 171 bits (416), Expect = 8e-43
Identities = 110/325 (33%), Positives = 165/325 (50%), Gaps = 9/325 (2%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
I +N+ + IG TP+V LN I K G + AK E + P S+KDRI Y+MV +A++ G
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGF 170
Query: 72 AKSGTR-FIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
G +EPTSGNTGIG+A A G+ + P S E+ + GAE+V T
Sbjct: 171 ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD-- 228
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMIXXX 189
P + + A+ L P+A Q+ N NP+ HYE T EI VD+
Sbjct: 229 -PAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAG 287
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
+ +KEK PK ++ V+P S I G + ++GIG F+P LD+ +
Sbjct: 288 IGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKI 347
Query: 250 IDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDG 309
+D+V + +A ++++ KEGL+ G SSGAA +AI+ AK+ AGK + V+ P
Sbjct: 348 MDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPE-NAGKLIAVVFPSF 406
Query: 310 IRNYMTKFVCDQWMEAHLFKEPPER 334
Y++ + Q + + K PER
Sbjct: 407 GERYLSTPLF-QSIREEVEKMQPER 430
>At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 430
Score = 170 bits (414), Expect = 1e-42
Identities = 105/306 (34%), Positives = 157/306 (51%), Gaps = 8/306 (2%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
I +N+ + IG TP+V LN I K G + AK E + P S+KDRI Y+MV +A++ G
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGF 170
Query: 72 AKSGTR-FIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
G +EPTSGNTGIG+A A G+ + P S E+ + GAE+V T
Sbjct: 171 ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD-- 228
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMIXXX 189
P + + A+ L P+A Q+ N NP+ HYE T EI VD+
Sbjct: 229 -PAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAG 287
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
+ +KEK PK ++ V+P S I G + ++GIG F+P LD+ +
Sbjct: 288 IGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKI 347
Query: 250 IDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDG 309
+D+V + +A ++++ KEGL+ G SSGAA +AI+ AK+ AGK + V+ P
Sbjct: 348 MDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPE-NAGKLIAVVFPSF 406
Query: 310 IRNYMT 315
Y++
Sbjct: 407 GERYLS 412
>At3g04940.1 68416.m00536 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 324
Score = 169 bits (411), Expect = 3e-42
Identities = 105/309 (33%), Positives = 162/309 (52%), Gaps = 8/309 (2%)
Query: 9 RNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQK 68
R I ++ + IG+TP+V LN I G + AK E + P S+K+RI+Y M+ +A+
Sbjct: 5 RCSIKDDATQLIGNTPMVYLNNIVD--GCVARIAAKLEMMEPCSSVKERIAYGMIKDAED 62
Query: 69 SGIAKSG-TRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQT 127
G+ G + IE TSGNTGIG+A A G+ + P S E+ + LGAEV T
Sbjct: 63 KGLITPGKSTLIEATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVHLT 122
Query: 128 PAMAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILA-LVPDVDMI 186
P + + + A+ ++P++I +Q+KN NP+THY T EI +VD++
Sbjct: 123 D---PSKGVQGIIDKAEEICSKNPDSIMLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDIL 179
Query: 187 XXXXXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLD 246
+ +KEK + V+P S + G + ++GIG +PD LD
Sbjct: 180 VAGVGTGGTLSGSGRFLKEKNKDFKVYGVEPTESAVISGGKPGTHLIQGIGAGLIPDNLD 239
Query: 247 KSVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVIL 306
+V+D+V + +A ++ + KEGLL G SSGAA +AI+ AK+ AGK +VVI
Sbjct: 240 FNVLDEVIQVTSVEAIETAKLLALKEGLLVGISSGAAAAAAIKVAKRPE-NAGKLIVVIF 298
Query: 307 PDGIRNYMT 315
P G Y++
Sbjct: 299 PSGGERYLS 307
>At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 432
Score = 166 bits (403), Expect = 3e-41
Identities = 104/297 (35%), Positives = 153/297 (51%), Gaps = 8/297 (2%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
I +N+ + IG TP+V LN I K G + AK E + P S+KDRI Y+MV +A++ G
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGF 170
Query: 72 AKSGTR-FIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
G +EPTSGNTGIG+A A G+ + P S E+ + GAE+V T
Sbjct: 171 ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD-- 228
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMIXXX 189
P + + A+ L P+A Q+ N NP+ HYE T EI VD+
Sbjct: 229 -PAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAG 287
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
+ +KEK PK ++ V+P S I G + ++GIG F+P LD+ +
Sbjct: 288 IGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKI 347
Query: 250 IDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVIL 306
+D+V + +A ++++ KEGL+ G SSGAA +AI+ AK+ AGK + V L
Sbjct: 348 MDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPE-NAGKLIAVSL 403
>At2g43750.1 68415.m05439 cysteine synthase, chloroplast /
O-acetylserine (thiol)-lyase / O-acetylserine
sulfhydrylase / cpACS1 (OASB) identical to SP|P47999
Cysteine synthase, chloroplast precursor (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (cpACS1) {Arabidopsis thaliana};
identical to cDNA O-acetylserine lyase (At.OAS.7-4)
GI:6983575
Length = 392
Score = 163 bits (397), Expect = 2e-40
Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 8/306 (2%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
I +N + IG TP+V LN + K G + AK E + P S+KDRI Y+M+ +A++ G+
Sbjct: 75 IADNAAQLIGKTPMVYLNNVVK--GCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGL 132
Query: 72 AKSGTR-FIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
G +E TSGNTGIG+A A G+ + P S E+ + GAE+V T
Sbjct: 133 ITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTE-- 190
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMIXXX 189
P + + A+ L + PN+ Q+ N NP+ HYE T EI +D++
Sbjct: 191 -PAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAG 249
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
+ +KE+ P+ ++ V+P S I G + ++GIG FVP LD ++
Sbjct: 250 IGTGGTITGVGRFIKERKPELKVIGVEPTESAILSGGKPGPHKIQGIGAGFVPKNLDLAI 309
Query: 250 IDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDG 309
+D+ + +A S+++ +EGLL G SSGAA +AI+ AK+ AGK + V+ P
Sbjct: 310 VDEYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPE-NAGKLIAVVFPSF 368
Query: 310 IRNYMT 315
Y++
Sbjct: 369 GERYLS 374
>At5g28020.2 68418.m03375 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 155 bits (376), Expect = 6e-38
Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 8/311 (2%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
I N+I E IG+TP+V LN + G + AK E + P S+KDRI+Y+M+ +A+ G+
Sbjct: 7 IKNDITELIGNTPMVYLNNVVD--GCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGL 64
Query: 72 AKSG-TRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
G + IEPT+GNTGIG+A A G+ +V P S E+ + LGAE+ +
Sbjct: 65 ITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHLSDQR 124
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILA-LVPDVDMIXXX 189
+ L + L + P Q++N NP HY T EI VD++
Sbjct: 125 IGLKG---MLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAG 181
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
+ +KE+ + V+P S + G + ++GIG VP LD ++
Sbjct: 182 VGTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLTI 241
Query: 250 IDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDG 309
+D++ + +A ++ + KEGLL G SSGAA +A++ AK+ AGK +VV+ P G
Sbjct: 242 VDEIIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPE-NAGKLIVVVFPSG 300
Query: 310 IRNYMTKFVCD 320
Y++ + D
Sbjct: 301 GERYLSTKLFD 311
>At5g28020.1 68418.m03374 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 155 bits (376), Expect = 6e-38
Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 8/311 (2%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
I N+I E IG+TP+V LN + G + AK E + P S+KDRI+Y+M+ +A+ G+
Sbjct: 7 IKNDITELIGNTPMVYLNNVVD--GCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGL 64
Query: 72 AKSG-TRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
G + IEPT+GNTGIG+A A G+ +V P S E+ + LGAE+ +
Sbjct: 65 ITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHLSDQR 124
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILA-LVPDVDMIXXX 189
+ L + L + P Q++N NP HY T EI VD++
Sbjct: 125 IGLKG---MLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAG 181
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
+ +KE+ + V+P S + G + ++GIG VP LD ++
Sbjct: 182 VGTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLTI 241
Query: 250 IDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDG 309
+D++ + +A ++ + KEGLL G SSGAA +A++ AK+ AGK +VV+ P G
Sbjct: 242 VDEIIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPE-NAGKLIVVVFPSG 300
Query: 310 IRNYMTKFVCD 320
Y++ + D
Sbjct: 301 GERYLSTKLFD 311
>At5g28030.2 68418.m03377 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 154 bits (374), Expect = 1e-37
Identities = 101/306 (33%), Positives = 152/306 (49%), Gaps = 8/306 (2%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
I N++ E IG+TP+V LN+I G + AK E + P SIKDRI+Y+M+ +A+ G+
Sbjct: 7 IKNDVTELIGNTPMVYLNKIVD--GCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGL 64
Query: 72 AKSG-TRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
G + IE T GNTGIG+A A G+ ++ P S E+ + LGAEV T
Sbjct: 65 ITPGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLTDIS 124
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILA-LVPDVDMIXXX 189
+ L AK L + P Q+ N NP HY T EI VD++
Sbjct: 125 IGIKGQ---LEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVAG 181
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
+ +KEK + V+P S + G + ++GIG +P LD S+
Sbjct: 182 VGTGGTVTGTGKFLKEKNKDIKVCVVEPSESAVLSGGKPGPHLIQGIGSGEIPANLDLSI 241
Query: 250 IDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDG 309
+D++ + +A ++ + KEGLL G SSGA+ +A++ AK+ GK +VVI P G
Sbjct: 242 VDEIIQVTGEEAIETTKLLAIKEGLLVGISSGASAAAALKVAKRPE-NVGKLIVVIFPSG 300
Query: 310 IRNYMT 315
Y++
Sbjct: 301 GERYLS 306
>At5g28030.1 68418.m03376 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 154 bits (374), Expect = 1e-37
Identities = 101/306 (33%), Positives = 152/306 (49%), Gaps = 8/306 (2%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
I N++ E IG+TP+V LN+I G + AK E + P SIKDRI+Y+M+ +A+ G+
Sbjct: 7 IKNDVTELIGNTPMVYLNKIVD--GCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGL 64
Query: 72 AKSG-TRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
G + IE T GNTGIG+A A G+ ++ P S E+ + LGAEV T
Sbjct: 65 ITPGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLTDIS 124
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILA-LVPDVDMIXXX 189
+ L AK L + P Q+ N NP HY T EI VD++
Sbjct: 125 IGIKGQ---LEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVAG 181
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
+ +KEK + V+P S + G + ++GIG +P LD S+
Sbjct: 182 VGTGGTVTGTGKFLKEKNKDIKVCVVEPSESAVLSGGKPGPHLIQGIGSGEIPANLDLSI 241
Query: 250 IDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDG 309
+D++ + +A ++ + KEGLL G SSGA+ +A++ AK+ GK +VVI P G
Sbjct: 242 VDEIIQVTGEEAIETTKLLAIKEGLLVGISSGASAAAALKVAKRPE-NVGKLIVVIFPSG 300
Query: 310 IRNYMT 315
Y++
Sbjct: 301 GERYLS 306
>At3g61440.1 68416.m06881 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to cysteine synthase
(EC 4.2.99.8) [Arabidopsis thaliana] GI:5824334;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 368
Score = 148 bits (358), Expect = 8e-36
Identities = 102/304 (33%), Positives = 150/304 (49%), Gaps = 8/304 (2%)
Query: 20 IGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSG-TRF 78
IG TPLV LN++ + G E + AK E P SIKDR + M+ +A+K + G T
Sbjct: 57 IGKTPLVFLNKVTE--GCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIPGKTTL 114
Query: 79 IEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESSEH 138
IEPTSGN GI +A A+ G+ + P S E+ T+ GAE+V T P +
Sbjct: 115 IEPTSGNMGISLAFMAAMKGYRIIMTMPSYTSLERRVTMRSFGAELVLTD---PAKGMGG 171
Query: 139 FLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILA-LVPDVDMIXXXXXXXXXXX 197
+ A L P+A C Q+ N N + H++ T EI + +VD+
Sbjct: 172 TVKKAYDLLDSTPDAFMCQQFANPANTQIHFDTTGPEIWEDTLGNVDIFVMGIGSGGTVS 231
Query: 198 XXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSVIDKVEKPN 257
+ +K K P I V+P S I G + + G G F P++LD V++ V + +
Sbjct: 232 GVGRYLKSKNPNVKIYGVEPAESNILNGGKPGPHAITGNGVGFKPEILDMDVMESVLEVS 291
Query: 258 DYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDGIRNYMTKF 317
DA M+RE+ KEGL+ G SSGA ++AIR A K+ GK +V I Y++
Sbjct: 292 SEDAIKMARELALKEGLMVGISSGANTVAAIRLA-KMPENKGKLIVTIHASFGERYLSSV 350
Query: 318 VCDQ 321
+ D+
Sbjct: 351 LFDE 354
>At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to SP|O22682 Probable
cysteine synthase, chloroplast precursor {Arabidopsis
thaliana}, similar to SP|P31300 Cysteine synthase,
chloroplast precursor {Capsicum annuum}
Length = 404
Score = 144 bits (350), Expect = 8e-35
Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 20/307 (6%)
Query: 12 IYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSG- 70
I ++ + IG TP+V LNR+ G ++ AK E + P S+KDRI +M+ EA+ SG
Sbjct: 99 IAEDVTQLIGSTPMVYLNRVTD--GCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGA 156
Query: 71 IAKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAM 130
I T +EPT+GNTG+G+A A G+ + P + E+ + LGAE+V T
Sbjct: 157 ITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTN-- 214
Query: 131 APWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILA-LVPDVDMIXXX 189
P + + + AK +L+ NA Q+ N N + H+E T EI + +VD+
Sbjct: 215 -PEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAG 273
Query: 190 XXXXXXXXXXAQKVKEKCPKCIIVTVDP-QGSLIFGEGPADLYFVEGIGGDFVPDVLDKS 248
+K +V V+P + S+I G+ P ++P +LD
Sbjct: 274 IGTGGTVTGTGGFLKMMNKDIKVVGVEPSERSVISGDNPG-----------YLPGILDVK 322
Query: 249 VIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPD 308
++D+V K ++ +A M+R + +EGLL G SSGAA ++A+ AK+ AGK + V+ P
Sbjct: 323 LLDEVFKVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKRAE-NAGKLITVLFPS 381
Query: 309 GIRNYMT 315
Y+T
Sbjct: 382 HGERYIT 388
>At3g22460.1 68416.m02839 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative nearly identical over 185 amino
acids to SP|P47998 Cysteine synthase (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}
Length = 188
Score = 114 bits (275), Expect = 1e-25
Identities = 63/167 (37%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Query: 11 RIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSG 70
+I ++ E IG+TPLV LN++ KD + AK E + P S+KDRI Y+M+ +A+ G
Sbjct: 7 KIAKDVTELIGNTPLVYLNKVAKD--CVGHVAAKLEMMEPCSSVKDRIGYSMIADAEAKG 64
Query: 71 IAKSGTR-FIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPA 129
+ K G IEPTSGNTG+G+A A G+ I P S E+ + GAE++ T
Sbjct: 65 LIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLVITMPASMSIERRIILLAFGAELILTD- 123
Query: 130 MAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEI 176
P + + ++ A+ L + PN Q++N NP+ HYE T EI
Sbjct: 124 --PAKGMKGAVAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEI 168
>At1g55880.2 68414.m06409 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 348
Score = 99 bits (238), Expect = 3e-21
Identities = 53/159 (33%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Query: 14 NNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAK 73
N +++ IG+TPL+R+N + + G CE+ KCEF+NPGGS+KDR++ ++ EA +SG
Sbjct: 42 NGLVDAIGNTPLIRINSLSEATG--CEILGKCEFLNPGGSVKDRVAVKIIQEALESGKLF 99
Query: 74 SGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPW 133
G E ++G+T I +A G C +V PD + EK I LGA V + ++
Sbjct: 100 PGGIVTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGASVERVRPVS-I 158
Query: 134 ESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYT 172
+H++++A+RR ++ N ++ + H E T
Sbjct: 159 THKDHYVNIARRR-ADEANELASKRRLGSETNGIHQEKT 196
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 157 DQYKNDVNPRTHYEYTAEEILALVP-DVDMIXXXXXXXXXXXXXAQKVKEKCPKCIIVTV 215
DQ++N N R HYE T EI ++D ++ +++K + +
Sbjct: 221 DQFENLANYRAHYEGTGPEIWHQTQGNIDAFVAAAGTGGTLAGVSRFLQDKNERVKCFLI 280
Query: 216 DPQGSLIFGE 225
DP GS ++ +
Sbjct: 281 DPPGSGLYNK 290
>At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 421
Score = 99 bits (238), Expect = 3e-21
Identities = 53/159 (33%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Query: 14 NNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAK 73
N +++ IG+TPL+R+N + + G CE+ KCEF+NPGGS+KDR++ ++ EA +SG
Sbjct: 42 NGLVDAIGNTPLIRINSLSEATG--CEILGKCEFLNPGGSVKDRVAVKIIQEALESGKLF 99
Query: 74 SGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPW 133
G E ++G+T I +A G C +V PD + EK I LGA V + ++
Sbjct: 100 PGGIVTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGASVERVRPVS-I 158
Query: 134 ESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYT 172
+H++++A+RR ++ N ++ + H E T
Sbjct: 159 THKDHYVNIARRR-ADEANELASKRRLGSETNGIHQEKT 196
Score = 53.6 bits (123), Expect = 2e-07
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 22/180 (12%)
Query: 157 DQYKNDVNPRTHYEYTAEEILALVP-DVDMIXXXXXXXXXXXXXAQKVKEKCPKCIIVTV 215
DQ++N N R HYE T EI ++D ++ +++K + +
Sbjct: 221 DQFENLANYRAHYEGTGPEIWHQTQGNIDAFVAAAGTGGTLAGVSRFLQDKNERVKCFLI 280
Query: 216 DPQGSLIFG-------------EG-----PADLYFVEGIGGDFVPDVLDKSVIDKVEKPN 257
DP GS ++ EG P D EGIG + + + +D +
Sbjct: 281 DPPGSGLYNKVTRGVMYTREEAEGRRLKNPFDT-ITEGIGINRLTKNFLMAKLDGGFRGT 339
Query: 258 DYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDGIRNYMTKF 317
D +A MSR ++K +GL G SS + A+R A+ L G G +V IL D +++KF
Sbjct: 340 DKEAVEMSRFLLKNDGLFVGSSSAMNCVGAVRVAQTL--GPGHTIVTILCDSGMRHLSKF 397
>At3g10050.1 68416.m01205 threonine ammonia-lyase / threonine
dehydratase / threonine deaminase (OMR1) identical to
SP|Q9ZSS6 Threonine dehydratase biosynthetic,
chloroplast precursor (EC 4.3.1.19, formerly EC
4.2.1.16) (Threonine deaminase) (TD) {Arabidopsis
thaliana}
Length = 592
Score = 43.2 bits (97), Expect = 4e-04
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 1 MSNSRSFTRNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISY 60
++ + + N + + + ++PL ++ K G+ M+ K E + P S K R +Y
Sbjct: 89 IAEAMEYLTNILSTKVYDIAIESPLQLAKKLSKRLGVR--MYLKREDLQPVFSFKLRGAY 146
Query: 61 TMVLEAQKSGIAKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLL 120
M+++ +AK I ++GN GVAL+ + G IV P + K + L
Sbjct: 147 NMMVKLPADQLAKG---VICSSAGNHAQGVALSASKLGCTAVIVMPVTTPEIKWQAVENL 203
Query: 121 GAEVV 125
GA VV
Sbjct: 204 GATVV 208
>At4g11640.1 68417.m01861 serine racemase, putative similar to
serine racemase [Mus musculus] GI:6448865; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 346
Score = 41.5 bits (93), Expect = 0.001
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 10/185 (5%)
Query: 36 GLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSGTRFIEPTSGNTGIGVALATA 95
G+EC F + G+ K R + VL AK + +SGN ++LA
Sbjct: 55 GIECRSFYFSVYCGKSGAFKFRGACNAVLSLDAEQAAKG---VVTHSSGNHAAALSLAAK 111
Query: 96 VCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESSEHFLSVAKRRLLEDPNAIS 155
+ G IV P K+ + G +V+ + A S E S ++L++ ++
Sbjct: 112 IQGIPAYIVVPKGAPKCKVDNVIRYGGKVIWSE--ATMSSREEIAS----KVLQETGSVL 165
Query: 156 CDQYKNDVNPRTHYEYTAEEILALVPDVDMIXXXXXXXXXXXXXAQKVKEKCPKCIIVTV 215
Y ND + A E+L + ++D I A K P I+
Sbjct: 166 IHPY-NDGRIISGQGTIALELLEQIQEIDAIVVPISGGGLISGVALAAKSIKPSIRIIAA 224
Query: 216 DPQGS 220
+P+G+
Sbjct: 225 EPKGA 229
>At5g38530.1 68418.m04659 tryptophan synthase-related low similarity
to tryptophan synthases, beta subunit, from Lactococcus
lactis [SP|Q01998], Pyrococcus kodakaraensis
[SP|Q9YGB0], Thermus thermophilus [SP|P16609]; contains
Pfam pyridoxal-phosphate dependent enzyme domain PF00291
Length = 506
Score = 34.3 bits (75), Expect = 0.16
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 23 TPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSGTRFIEPT 82
TPL+R R+ K ++ K E +P GS K + K G+ T E
Sbjct: 134 TPLIRAKRLEKLLQTPARIYFKYEGGSPAGSHKPNTAVPQAYYNAKEGVKNVVT---ETG 190
Query: 83 SGNTGIGVALATAVCGFGCTI 103
+G G +A A+++ G C +
Sbjct: 191 AGQWGSSLAFASSLFGLDCEV 211
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 32.7 bits (71), Expect = 0.50
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 223 FGEGPA-DLYF-VEGIGGDFVPDVLDKSVIDKVEKPNDYDAFNMSREIIKKEGL 274
F + PA + YF + G+ G V D+ + V+KP + DAF MS E++K L
Sbjct: 297 FQDLPAYERYFMISGLKGSGVKDLSQYLMDQAVKKPWEEDAFTMSEEVLKNISL 350
>At5g47140.1 68418.m05811 zinc finger (GATA type) family protein
contains Pfam:PF00320 GATA zinc finger domain
Length = 470
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 341 GVLTKDSLRSEATNPKKAGRIDFNEPVNRHLIKTYYKIVENRGNPTVGLASRILDIAP 398
GV +S ++ + K ++ ++P HL+++YY + V SR+ ++P
Sbjct: 319 GVFETNSSYAKLEDIKTLAKLALSDPNKSHLLESYYMLKRREIEDCVTTTSRVSSLSP 376
>At3g05610.1 68416.m00623 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 669
Score = 29.1 bits (62), Expect = 6.2
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 34 DYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAK-SGTRFIEPTSGNTGIGVAL 92
D+GL+ +++ + PG ++ +R+++ + + I K + ++I+ G GV
Sbjct: 502 DFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSEEDILKFTPAQYIQGDDWIPGKGVPY 561
Query: 93 ATAVCGF--GCTIVTPDKNSDEK-MSTIS-LLGAEVVQTPAMAPWESSEHFLSVAKRRLL 148
T + TP ++ ST + GA+ + P +P S E +S+A
Sbjct: 562 TTGLLAGNPAAATTTPSVSAAAPGFSTFTDTSGADSI-APTASPAASPESSISMAYTGTA 620
Query: 149 EDPNAISCDQYKNDVNPRTHY 169
++I +P + +
Sbjct: 621 SPESSIKVSSSTETASPESSF 641
>At2g36540.1 68415.m04482 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 249
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 256 PNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKL-NFG 297
P YDA N+ ++ EG LC G A S ++A K+ +FG
Sbjct: 185 PMSYDASNIKDNLLDPEGELCSYLEGLAKSSDVQAYIKVHSFG 227
>At5g58730.1 68418.m07357 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 353
Score = 28.7 bits (61), Expect = 8.1
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Query: 150 DPNAISCDQYKNDVNPRTHYEYTAEEILALVPDVDMIXXXXXXXXXXXXXAQKVKEKCPK 209
D +++SCD V YE T I+A + + A +V ++
Sbjct: 57 DSSSVSCDLVSK-VGHDFRYEVTHSPIVAPEKETTVFEAYFDLGIDGIGHADRVLKRVSA 115
Query: 210 CIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSV 249
C DP + D G+GG+ +P+ L+K V
Sbjct: 116 C-----DPILPSDIPDSRFDFGMAVGVGGEILPETLEKMV 150
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.137 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,535,955
Number of Sequences: 28952
Number of extensions: 448487
Number of successful extensions: 1048
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 966
Number of HSP's gapped (non-prelim): 27
length of query: 440
length of database: 12,070,560
effective HSP length: 83
effective length of query: 357
effective length of database: 9,667,544
effective search space: 3451313208
effective search space used: 3451313208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -