Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000065-TA|BGIBMGA000065-PA|IPR001216|Cysteine
synthase/cystathionine beta-synthase P-phosphate-binding site,
IPR001926|Pyridoxal-5'-phosphate-dependent enzyme, beta subunit
(440 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 295 5e-80
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 282 4e-76
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 282 4e-76
Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical p... 167 1e-41
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 147 2e-35
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 146 4e-35
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 144 8e-35
AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical ... 135 7e-32
U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical pr... 82 9e-16
AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical ... 48 2e-05
AF016425-5|AAB65338.1| 162|Caenorhabditis elegans Hypothetical ... 46 5e-05
Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical p... 45 9e-05
Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical pr... 45 9e-05
Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical pr... 38 0.014
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p... 30 2.8
U09277-1|AAC13764.1| 532|Caenorhabditis elegans UNC-17 protein. 30 2.8
L19621-1|AAC14456.1| 532|Caenorhabditis elegans acetylcholine t... 30 2.8
AF036701-4|AAB88371.1| 532|Caenorhabditis elegans Uncoordinated... 30 2.8
AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical ... 29 6.5
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 295 bits (723), Expect = 5e-80
Identities = 152/329 (46%), Positives = 209/329 (63%), Gaps = 9/329 (2%)
Query: 9 RNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQK 68
R + +++L+ IG TPLV+L +PK +G+ C ++ KCEF+N GGS KDRI+ MV A+K
Sbjct: 333 RPLVLDSVLDAIGKTPLVKLQHVPKAHGVRCNVYVKCEFLNAGGSTKDRIAKKMVEIAEK 392
Query: 69 SG----IAKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEV 124
+G + T IEPTSGNTGIG++L AV G+ C I P+K S EK +T+S+LG+ +
Sbjct: 393 TGKPGALTPGATTLIEPTSGNTGIGLSLVAAVRGYKCLITMPEKMSKEKSTTLSVLGSTI 452
Query: 125 VQTPAMAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-- 182
V+TP A + S + VA R E P A+ DQY N NP HYE TAEEIL + D
Sbjct: 453 VRTPNEAAFNSPSSHIGVALRLKHEIPGAVILDQYCNPGNPLAHYEETAEEILWDMGDRK 512
Query: 183 VDMIXXXXXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGE--GPA-DLYFVEGIGGD 239
+D++ ++K+ E+ P I+V VDP GS++ G GPA D Y VEGIG D
Sbjct: 513 IDLVVLGAGTGGTITGISRKIHERRPNAIVVGVDPNGSILTGPTTGPAPDFYEVEGIGYD 572
Query: 240 FVPDVLDKSVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAG 299
F+P LD+ +D K +D ++F M+REII+ EG+LCGGSSG A+ A+ +KL+
Sbjct: 573 FIPGTLDEKSVDSWLKSDDKESFLMAREIIRTEGILCGGSSGCAVHYALEQCRKLDLPED 632
Query: 300 KRVVVILPDGIRNYMTKFVCDQWMEAHLF 328
VVV+LPDGIRNY+TKF+ D WM+A F
Sbjct: 633 ANVVVLLPDGIRNYLTKFLDDDWMKARGF 661
Score = 79.4 bits (187), Expect = 5e-15
Identities = 86/324 (26%), Positives = 143/324 (44%), Gaps = 29/324 (8%)
Query: 23 TPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSGTRFIEPT 82
T LV L ++ ++ L+ +++ K E++N GS++DR ++ +GI + ++
Sbjct: 21 TQLVPLKKLKAEFQLKSDIYVKLEYLNISGSLEDRAAHRAF--EMSNGIQRGDEVYVT-A 77
Query: 83 SGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESSEHFLSV 142
G++ + A AV G T P D+ + +S LG ++V+ P E+ +
Sbjct: 78 GGSSAVSYATVAAVKGVRLTAHAPPGAFDQVRTILSTLGTKIVELPVSNFREARLQADLL 137
Query: 143 AKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPDVDMIXXXXXXXXXXXXXAQK 202
AKRR + + + I C++ N E TA EI ++
Sbjct: 138 AKRRGVYNLDGI-CEKAAFLAN----LEGTAPEIEKAGKTSAVVVPLDAGGASAAAGIAA 192
Query: 203 VKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSVIDKVEKPNDYDAF 262
K K +V V S PA V +L K ++ + P Y
Sbjct: 193 YFLKDQKTTVVGVRSSASAS-ASAPAPETEV----------LLQKYKVEIRDAPESY--- 238
Query: 263 NMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDGIRNYMTKFVCDQW 322
+R +I+ EG++ G SSGAA++ AI+ AK L AG VVV+L DGIR+Y+ W
Sbjct: 239 TFTRHLIETEGIMAGPSSGAAVLEAIKLAKDL--PAGSVVVVVLMDGIRDYLDA----DW 292
Query: 323 MEAHLFKEPPEREFLFFKGVLTKD 346
M+ + K+P + +F VL D
Sbjct: 293 MKVN-GKKPIKPREIFDPKVLDYD 315
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 282 bits (691), Expect = 4e-76
Identities = 147/327 (44%), Positives = 202/327 (61%), Gaps = 7/327 (2%)
Query: 9 RNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQK 68
R + + +L+ IG TPLV+L IPK +G++C ++ KCE++N GGS KDRI+ MV A+K
Sbjct: 375 RPLVLDTVLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEK 434
Query: 69 SGIAKS---GTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVV 125
+G G IEPTSGNTGIG++LA+AV G+ C I P K S EK ++ LG+ ++
Sbjct: 435 TGKPGKLVPGVTLIEPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTII 494
Query: 126 QTPAMAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD--V 183
+TP A ++S + VA R E +A+ DQY N NP HYE TAEEI+ + D +
Sbjct: 495 RTPNEAGFDSPHSHIGVALRLKSEIQDAVVLDQYCNPGNPLAHYEETAEEIIYDMGDKHI 554
Query: 184 DMIXXXXXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFG--EGPADLYFVEGIGGDFV 241
D++ ++K+ E+ P +V VDP GS++ G E D Y VEGIG DF+
Sbjct: 555 DLVVLTAGTGGTVTGISRKIHERIPTAKVVGVDPHGSILAGPAETDIDFYEVEGIGYDFL 614
Query: 242 PDVLDKSVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKR 301
P LD S ID K +D ++F M+RE+I+ EG+LCGGSSG A+ A+ K LN A
Sbjct: 615 PGTLDTSAIDYWAKSHDKESFLMARELIRSEGILCGGSSGCAVHYALEECKSLNLPAEAN 674
Query: 302 VVVILPDGIRNYMTKFVCDQWMEAHLF 328
VVV+LPDGIRNY+TKF+ D WM F
Sbjct: 675 VVVLLPDGIRNYITKFLDDDWMNERHF 701
Score = 73.3 bits (172), Expect = 3e-13
Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 236 IGGDFVPDVLDKSVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLN 295
+G D D+L + ++K E D +A++ +R +I EG++ G SSGAA++ AI+ AK+L
Sbjct: 232 MGLDLKNDLLQEYNVEKREVEED-EAYSFTRHLIGTEGIMAGPSSGAAVLEAIKLAKEL- 289
Query: 296 FGAGKRVVVILPDGIRNYMTKFVCDQWMEAH 326
AG +VV+L DGIRNY+ F+ D W+ A+
Sbjct: 290 -PAGSTIVVVLMDGIRNYLRHFLDDDWITAN 319
Score = 59.3 bits (137), Expect = 5e-09
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 13 YNNILETIG-DTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
YN ILE TPLV L ++ ++ L+ +++ K E++N GS++DR + A++ G+
Sbjct: 19 YNTILEAAQRPTPLVPLKKLKVEHQLQSDIYVKLEYLNIAGSLEDRTADKAFQFAEEIGV 78
Query: 72 AKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTP 128
+ F+ G+ I A AV G TI P D + + LG + V+ P
Sbjct: 79 VRGDEVFV-TAGGSAAISYATVAAVKGIKLTIYAPKGEFDLVDTVLHTLGVKTVELP 134
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 282 bits (691), Expect = 4e-76
Identities = 147/327 (44%), Positives = 202/327 (61%), Gaps = 7/327 (2%)
Query: 9 RNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQK 68
R + + +L+ IG TPLV+L IPK +G++C ++ KCE++N GGS KDRI+ MV A+K
Sbjct: 375 RPLVLDTVLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEK 434
Query: 69 SGIAKS---GTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVV 125
+G G IEPTSGNTGIG++LA+AV G+ C I P K S EK ++ LG+ ++
Sbjct: 435 TGKPGKLVPGVTLIEPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTII 494
Query: 126 QTPAMAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD--V 183
+TP A ++S + VA R E +A+ DQY N NP HYE TAEEI+ + D +
Sbjct: 495 RTPNEAGFDSPHSHIGVALRLKSEIQDAVVLDQYCNPGNPLAHYEETAEEIIYDMGDKHI 554
Query: 184 DMIXXXXXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFG--EGPADLYFVEGIGGDFV 241
D++ ++K+ E+ P +V VDP GS++ G E D Y VEGIG DF+
Sbjct: 555 DLVVLTAGTGGTVTGISRKIHERIPTAKVVGVDPHGSILAGPAETDIDFYEVEGIGYDFL 614
Query: 242 PDVLDKSVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKR 301
P LD S ID K +D ++F M+RE+I+ EG+LCGGSSG A+ A+ K LN A
Sbjct: 615 PGTLDTSAIDYWAKSHDKESFLMARELIRSEGILCGGSSGCAVHYALEECKSLNLPAEAN 674
Query: 302 VVVILPDGIRNYMTKFVCDQWMEAHLF 328
VVV+LPDGIRNY+TKF+ D WM F
Sbjct: 675 VVVLLPDGIRNYITKFLDDDWMNERHF 701
Score = 73.3 bits (172), Expect = 3e-13
Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 236 IGGDFVPDVLDKSVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLN 295
+G D D+L + ++K E D +A++ +R +I EG++ G SSGAA++ AI+ AK+L
Sbjct: 232 MGLDLKNDLLQEYNVEKREVEED-EAYSFTRHLIGTEGIMAGPSSGAAVLEAIKLAKEL- 289
Query: 296 FGAGKRVVVILPDGIRNYMTKFVCDQWMEAH 326
AG +VV+L DGIRNY+ F+ D W+ A+
Sbjct: 290 -PAGSTIVVVLMDGIRNYLRHFLDDDWITAN 319
Score = 59.3 bits (137), Expect = 5e-09
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 13 YNNILETIG-DTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGI 71
YN ILE TPLV L ++ ++ L+ +++ K E++N GS++DR + A++ G+
Sbjct: 19 YNTILEAAQRPTPLVPLKKLKVEHQLQSDIYVKLEYLNIAGSLEDRTADKAFQFAEEIGV 78
Query: 72 AKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTP 128
+ F+ G+ I A AV G TI P D + + LG + V+ P
Sbjct: 79 VRGDEVFV-TAGGSAAISYATVAAVKGIKLTIYAPKGEFDLVDTVLHTLGVKTVELP 134
>Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical
protein C17G1.7 protein.
Length = 341
Score = 167 bits (406), Expect = 1e-41
Identities = 105/309 (33%), Positives = 157/309 (50%), Gaps = 8/309 (2%)
Query: 9 RNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQK 68
RN I N IG+TP+V +N++ K GL + K E++NP GS+KDRI M+ A+K
Sbjct: 4 RNSIGENAAALIGNTPMVYINKLTK--GLPGTVAVKIEYMNPAGSVKDRIGAAMLAAAEK 61
Query: 69 SGIAKSG-TRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQT 127
G G T IEPTSGNTGI +A A G+ C + P S E+ + + G+EVV T
Sbjct: 62 DGTVIPGVTTLIEPTSGNTGIALAFVAAAKGYRCIVTMPASMSGERRTLLKAYGSEVVLT 121
Query: 128 PAMAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMI 186
P + + + +A + P +I Q+ N NP HY+ T EI VD +
Sbjct: 122 D---PAKGMKGAIDMANQLKENIPGSIILAQFDNPNNPLVHYQTTGPEIWRQTKGTVDAV 178
Query: 187 XXXXXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLD 246
+ ++E+ P + V+P+ S I PA + ++GIG F P VLD
Sbjct: 179 VFGVGTGGTITGVGRYLQEQNPGVRVFAVEPEESAILSGRPAGPHKIQGIGAGFAPAVLD 238
Query: 247 KSVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVIL 306
+ + V + + +A M++ + +EGLL G SSGA + +A++ A + AGK +V L
Sbjct: 239 TKIYEDVIRIHSDEAIVMAQRLSYEEGLLGGISSGANVAAALQLAARPEM-AGKLIVTCL 297
Query: 307 PDGIRNYMT 315
P YMT
Sbjct: 298 PSCGERYMT 306
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 147 bits (356), Expect = 2e-35
Identities = 94/302 (31%), Positives = 154/302 (50%), Gaps = 12/302 (3%)
Query: 18 ETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSG-T 76
E IG+TPL++LN+I KD G + K E++NP S+KDRI++ M+ A+K+G+ G T
Sbjct: 12 ELIGNTPLLKLNKIGKDLG--ASIAVKVEYMNPACSVKDRIAFNMIDTAEKAGLITPGKT 69
Query: 77 RFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESS 136
IEPTSGN GI +A + G+ + P S E+ + GAEV+ T + +
Sbjct: 70 VLIEPTSGNMGIALAYCGKLRGYKVILTMPASMSIERRCLLKAYGAEVILTDPATAVKGA 129
Query: 137 EHFLSVAKRRLLED--PNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMIXXXXXXX 193
V + L D PNA +Q+ N NP HY+ T EI VD++
Sbjct: 130 -----VQRAEELRDVIPNAYILNQFGNPANPEAHYKTTGPEIWRQTQGKVDIVCFGVGSG 184
Query: 194 XXXXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSVIDKV 253
+ +KEK P + V+P S + P + ++G+G +PD+LD ++ +
Sbjct: 185 GTCTGVGRFLKEKNPSVQVFPVEPFESSVINGLPHSPHKIQGMGTGMIPDILDLTLFSEA 244
Query: 254 EKPNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDGIRNY 313
+ + DA M++++ +E +L G SSGA + +A++ AK+ GK +V + Y
Sbjct: 245 LRVHSDDAIAMAKKLADEESILGGISSGANVCAAVQLAKRPE-NKGKLIVTTVNSFGERY 303
Query: 314 MT 315
++
Sbjct: 304 LS 305
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 146 bits (353), Expect = 4e-35
Identities = 95/300 (31%), Positives = 149/300 (49%), Gaps = 8/300 (2%)
Query: 18 ETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSG-T 76
+TIG+TPLV L I K GL+ + K E++NP S+KDRI+ +MV EA+K+G G T
Sbjct: 12 DTIGNTPLVLLRNISK--GLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKT 69
Query: 77 RFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESS 136
+E TSGN GI +A + G+ +V P S E+ + + GAEV+ + P E
Sbjct: 70 VLVEGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVILSD---PAEGH 126
Query: 137 EHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMIXXXXXXXXX 195
+ + + + PNA DQ+ N NP HY T EI VD++
Sbjct: 127 PGVIKKVEMLVDKLPNAHCLDQFSNPANPAAHYRTTGPEIWRQTEGKVDIVCFGVGSSGT 186
Query: 196 XXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSVIDKVEK 255
+ ++E+ P I V+P S + P + ++GIG VP +D+S+ ++ +
Sbjct: 187 VTGVGRYLREQNPNIEIYPVEPYESSVLSGLPRGPHKIQGIGAGIVPGNVDRSLFTEILR 246
Query: 256 PNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDGIRNYMT 315
DA M+R + +E +L G SSGA +++A+ A + GK +V + Y T
Sbjct: 247 IKSDDAMQMARRLADEEAILGGISSGANVVAAVELASRPE-NKGKLIVTTVNSFAERYFT 305
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 144 bits (350), Expect = 8e-35
Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 8/299 (2%)
Query: 18 ETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSG-T 76
+TIG+TPLV L I K GL+ + K E++NP S+KDRI+ +MV EA+K+G G T
Sbjct: 12 DTIGNTPLVLLRNISK--GLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKT 69
Query: 77 RFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESS 136
+E TSGN GI +A + G+ +V P S E+ + + GAEV+ + P E
Sbjct: 70 VLVEGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVILSD---PAEGH 126
Query: 137 EHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMIXXXXXXXXX 195
+ + + + PNA DQ+ N NP HY T EI VD++
Sbjct: 127 PGVIKKVEMLVDKLPNAHCLDQFSNPANPAAHYRTTGPEIWRQTEGKVDIVCFGVGSSGT 186
Query: 196 XXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSVIDKVEK 255
+ ++E+ P I V+P S + P + ++GIG VP +D+S+ ++ +
Sbjct: 187 VTGVGRYLREQNPNIEIYPVEPYESSVLSGLPRGPHKIQGIGAGIVPGNVDRSLFTEILR 246
Query: 256 PNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDGIRNYM 314
DA M+R + +E +L G SSGA +++A+ A + GK +V + Y+
Sbjct: 247 IKSDDAMQMARRLADEEAILGGISSGANVVAAVELASRPE-NKGKLIVTTVNSFAERYL 304
>AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical
protein F59A7.9 protein.
Length = 337
Score = 135 bits (326), Expect = 7e-32
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 18 ETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSG-IAKSGT 76
+T+G+TPLV L I K GL+ + K E++NP S+KDRI+ TMV +A+K+G I T
Sbjct: 12 DTVGNTPLVLLRNITK--GLDARIAVKIEYLNPSCSVKDRIAKTMVDDAEKAGKIVPGKT 69
Query: 77 RFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESS 136
+E TSGN GI +A + G+ +V S E+ + + GAEV+ + P E
Sbjct: 70 VLVEGTSGNLGIALAHIGRIRGYKVILVMTTAMSIERRAMLRAYGAEVILSD---PAEGH 126
Query: 137 EHFLSVAKRRLLEDPNAISCDQYKNDVNPRTHYEYTAEEILALVPD-VDMIXXXXXXXXX 195
+ + + + P+A DQ+ N NP HY T EI VDM+
Sbjct: 127 PGIVKKIEMLVSKLPDAYCLDQFSNPSNPAAHYRTTGPEIWKQTQGKVDMVCFGVGSGGT 186
Query: 196 XXXXAQKVKEKCPKCIIVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSVIDKVEK 255
+ ++ + + V+P S + P + + GIG +P +D+S+ +V +
Sbjct: 187 VTGVGRYLRAQKQNIGVYPVEPFESSVLSGFPRGPHKIHGIGAGLIPGNVDRSLFTEVFR 246
Query: 256 PNDYDAFNMSREIIKKEGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDGIRNYMT 315
DA M+R + +E +L G SSGA +++A+ A++ GK +V + Y +
Sbjct: 247 VKSEDAMKMARRLADEEAILGGISSGANVVAAVELARRPE-NIGKLIVTTVNSFAERYFS 305
>U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical
protein R08E5.2b protein.
Length = 240
Score = 81.8 bits (193), Expect = 9e-16
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 106 PDKNSDEKMSTISLLGAEVVQTPAMAPWESSEHFLSVAKRRLLEDPNAISCDQYKNDVNP 165
P S E+ + + GAEV+ + P E + + + + PNA DQ+ N NP
Sbjct: 2 PATMSVERRAMLRAYGAEVILSD---PAEGHPGVIKKVEMLVDKLPNAHCLDQFSNPANP 58
Query: 166 RTHYEYTAEEILALVPD-VDMIXXXXXXXXXXXXXAQKVKEKCPKCIIVTVDPQGSLIFG 224
HY T EI VD++ + ++E+ P I V+P S +
Sbjct: 59 AAHYRTTGPEIWRQTEGKVDIVCFGVGSSGTVTGVGRYLREQNPNIEIYPVEPYESSVLS 118
Query: 225 EGPADLYFVEGIGGDFVPDVLDKSVIDKVEKPNDYDAFNMSREIIKKEGLLCGGSSGAAM 284
P + ++GIG VP +D+S+ ++ + DA M+R + +E +L G SSGA +
Sbjct: 119 GLPRGPHKIQGIGAGIVPGNVDRSLFTEILRIKSDDAMQMARRLADEEAILGGISSGANV 178
Query: 285 ISAIRAAKKLNFGAGKRVVVILPDGIRNYMT 315
++A+ A + GK +V + Y T
Sbjct: 179 VAAVELASRPE-NKGKLIVTTVNSFAERYFT 208
>AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical
protein T25D3.3 protein.
Length = 427
Score = 47.6 bits (108), Expect = 2e-05
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 1 MSNSRSFTRNRIYNNILET--IGDTPLVRLNRIPKDYGL-ECEMFAKCEFVNPGGSIKDR 57
M+ S+ +TR+ I E +G TP+ + GL + K E + GS+K R
Sbjct: 41 MTESKEWTRDAIQKMWSERNLMGSTPI----HVIDPPGLPSVRLVFKNESASLTGSLKHR 96
Query: 58 ISYTMVLEAQKSGIAKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTI 117
S+++++ A G K+GT E +SGNT + + G T V PD K+ I
Sbjct: 97 YSWSLMMWALLEGHVKNGTHVFEASSGNTACSLGYMCRLLGLQFTAVVPDTIEQVKVRRI 156
Query: 118 SLLGAEVVQTP 128
VV+ P
Sbjct: 157 EEQEGFVVRVP 167
>AF016425-5|AAB65338.1| 162|Caenorhabditis elegans Hypothetical
protein F59A7.7 protein.
Length = 162
Score = 46.0 bits (104), Expect = 5e-05
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 212 IVTVDPQGSLIFGEGPADLYFVEGIGGDFVPDVLDKSVIDKVEKPNDYDAFNMSREIIKK 271
+ V+P S + P + + GIG +P +D+S+ +V + DA M+R + +
Sbjct: 28 VYPVEPFESSVLSGFPRGPHKIHGIGAGLIPGNVDRSLFTEVLRVKSEDAMKMARRLADE 87
Query: 272 EGLLCGGSSGAAMISAIRAAKKLNFGAGKRVVVILPDGIRNYMT 315
E +L SSGA +++A+ A + GK +V + Y +
Sbjct: 88 EAILGEISSGANVVAAVELACRPE-NIGKLIVTTVNSFAERYFS 130
>Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 45.2 bits (102), Expect = 9e-05
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 20 IGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSGTRFI 79
+G TPLV+ + P + ++F K E V+ ++K R ++ ++L A G S T +
Sbjct: 56 MGHTPLVKFS--PPGFP-NTDIFFKNETVSATRTLKHRFAWALLLWAIVEGKVTSKTSAV 112
Query: 80 -EPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESSEH 138
+ TSGN G A + G V ++ EK+ I G +V++ P S
Sbjct: 113 YDATSGNMGSAEAYMCTLVGIPYFAVVSEECEQEKIDNIEKFGGKVIKVPTALRTTKSNE 172
Query: 139 F 139
F
Sbjct: 173 F 173
>Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 45.2 bits (102), Expect = 9e-05
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 20 IGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSGTRFI 79
+G TPLV+ + P + ++F K E V+ ++K R ++ ++L A G S T +
Sbjct: 56 MGHTPLVKFS--PPGFP-NTDIFFKNETVSATRTLKHRFAWALLLWAIVEGKVTSKTSAV 112
Query: 80 -EPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTPAMAPWESSEH 138
+ TSGN G A + G V ++ EK+ I G +V++ P S
Sbjct: 113 YDATSGNMGSAEAYMCTLVGIPYFAVVSEECEQEKIDNIEKFGGKVIKVPTALRTTKSNE 172
Query: 139 F 139
F
Sbjct: 173 F 173
>Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical
protein F13B12.4 protein.
Length = 435
Score = 39.9 bits (89), Expect = 0.003
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 20 IGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIAKSGTRFI 79
+G TP+ + + P + ++F K E ++K R ++ ++L A G S T +
Sbjct: 57 MGHTPMTKFS--PPGFP-NADIFFKNETATATRTLKHRFAWALLLWAITEGKVTSKTSAV 113
Query: 80 -EPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVVQTP 128
+ TSGNTG A + V D EK+ I G ++++ P
Sbjct: 114 YDSTSGNTGSAEAYMCTLVNVPYYAVVADNLEKEKVKQIESFGGKIIKVP 163
>Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical
protein T01H8.2 protein.
Length = 317
Score = 37.9 bits (84), Expect = 0.014
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 13 YNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSGIA 72
Y + T ++ I + G + KCE + GS K R + + A++
Sbjct: 14 YQRTAPFLHKTLVITSENIDEKVGNGTHVLFKCEHLQKTGSFKARGALNSAILAKE---- 69
Query: 73 KSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTPDKNSDEKMSTISLLGAEVV 125
K+ I +SGN G +A A G CTIV P K+ + A +V
Sbjct: 70 KNAKGMIAHSSGNHGQALAWAAQKIGLPCTIVVPKNAPISKIEGMREYNANIV 122
>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
protein B0222.9 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 2.8
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 30 RIPKDYGLECEMFAK--CEFVNPGGSIKDRISYTMVLEAQKSGIAKSGTRFIEPTSGNTG 87
+I D +EC + K EF N IK + A K GIA S RF P G TG
Sbjct: 868 KIHNDALVECWEYCKKWSEFENRQSGIKQ---FNKNSTAVKRGIAMSSVRFGLPHPGPTG 924
Query: 88 IGVA 91
G+A
Sbjct: 925 HGIA 928
>U09277-1|AAC13764.1| 532|Caenorhabditis elegans UNC-17 protein.
Length = 532
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 66 AQKSGIAKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTP 106
A SG+A RF E + +G+AL A FGC + P
Sbjct: 170 ADTSGLAMIADRFTEENERSAALGIAL--AFISFGCLVAPP 208
>L19621-1|AAC14456.1| 532|Caenorhabditis elegans acetylcholine
transporter protein.
Length = 532
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 66 AQKSGIAKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTP 106
A SG+A RF E + +G+AL A FGC + P
Sbjct: 170 ADTSGLAMIADRFTEENERSAALGIAL--AFISFGCLVAPP 208
>AF036701-4|AAB88371.1| 532|Caenorhabditis elegans Uncoordinated
protein 17, isoform a protein.
Length = 532
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 66 AQKSGIAKSGTRFIEPTSGNTGIGVALATAVCGFGCTIVTP 106
A SG+A RF E + +G+AL A FGC + P
Sbjct: 170 ADTSGLAMIADRFTEENERSAALGIAL--AFISFGCLVAPP 208
>AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical
protein F33E11.2 protein.
Length = 366
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 15 NILETIGDTPLVRL-----NRIPKDYGLECEMFAKCEF-VNPGGSIKDRISYTMVLEAQK 68
N+++ I L+R N + +Y ++C++F C+F GS+ + I+ T+ A
Sbjct: 170 NLVDNISYPGLIRFCGKVRNNLGNNYNIQCDIFQMCQFGARSLGSVHNTITVTVAAAAPI 229
Query: 69 SGIAKSG 75
+ G
Sbjct: 230 PNLVPRG 236
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.137 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,116,394
Number of Sequences: 27539
Number of extensions: 473721
Number of successful extensions: 934
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 881
Number of HSP's gapped (non-prelim): 26
length of query: 440
length of database: 12,573,161
effective HSP length: 84
effective length of query: 356
effective length of database: 10,259,885
effective search space: 3652519060
effective search space used: 3652519060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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