Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000064-TA|BGIBMGA000064-PA|IPR000866|Alkyl hydroperoxide
reductase/ Thiol specific antioxidant/ Mal allergen,
IPR012336|Thioredoxin-like fold
         (227 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.6  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)

Query: 199 CPAGW---NPDTNADTIKPNP 216
           CP G+   N + N D  KPNP
Sbjct: 210 CPKGFQGQNCELNVDDCKPNP 230


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 164 TLRHMSVNDLPVGRSVDETLRLVKAFQFADKHGE 197
           TL+   +NDL   R V E++  V+  +     GE
Sbjct: 69  TLKRYKLNDLEKRREVYESIFKVEVHEALMSRGE 102


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 164 TLRHMSVNDLPVGRSVDETLRLVKAFQFADKHGE 197
           TL+   +NDL   R V E++  V+  +     GE
Sbjct: 229 TLKRYKLNDLEKRREVYESIFKVEVHEALMSRGE 262


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 164 TLRHMSVNDLPVGRSVDETLRLVKAFQFADKHGE 197
           TL+   +NDL   R V E++  V+  +     GE
Sbjct: 229 TLKRYKLNDLEKRREVYESIFKVEVHEALMSRGE 262


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 62  TGKYVVLFFYPLDFTFV 78
           T K+    F+P+DFT +
Sbjct: 352 TSKFSAAGFFPVDFTLL 368


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.137    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,916
Number of Sequences: 317
Number of extensions: 2288
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 227
length of database: 114,650
effective HSP length: 55
effective length of query: 172
effective length of database: 97,215
effective search space: 16720980
effective search space used: 16720980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)