Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000064-TA|BGIBMGA000064-PA|IPR000866|Alkyl hydroperoxide
reductase/ Thiol specific antioxidant/ Mal allergen,
IPR012336|Thioredoxin-like fold
(227 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 139 1e-33
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 97 1e-20
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 83 2e-16
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 64 1e-10
06_01_0671 - 4899611-4899829,4900870-4901448 62 3e-10
06_03_0811 + 24830496-24831194 35 0.062
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 31 0.77
12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-25... 30 1.3
11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-23... 30 1.3
02_01_0449 - 3229260-3229365,3230264-3230396,3230536-3230625,323... 30 1.3
01_06_1608 - 38612754-38616947,38617030-38617095 29 4.1
12_01_0286 - 2127622-2127897,2128611-2128997,2129195-2129550,212... 28 7.1
09_05_0015 - 20083143-20083308,20083645-20084017,20084362-200846... 28 7.1
01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048 28 7.1
09_02_0548 - 10467342-10468810,10470309-10471632 27 9.4
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 27 9.4
06_01_0362 - 2587112-2587774 27 9.4
03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171 27 9.4
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 139 bits (337), Expect = 1e-33
Identities = 64/117 (54%), Positives = 85/117 (72%), Gaps = 4/117 (3%)
Query: 109 FSHLAWINTPRNDGGLGKMEIPLLADYKKQISKDYDVLL-DDGFALRGLFIIDRNGTLRH 167
FSHLAW+ T R GGLG ++ PL++D K ISK + VL+ D G ALRGLFIID+ G ++H
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 168 MSVNDLPVGRSVDETLRLVKAFQFA-DKHGEVCPAGWNPDTNADTIKPNPKDSKEYF 223
++N+L +GRSVDET+R ++A Q+ D EVCPAGW P ++KP+PK SKEYF
Sbjct: 272 STINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDK--SMKPDPKGSKEYF 326
Score = 97.9 bits (233), Expect = 6e-21
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 33 APKVQKPAPDFSATAVVNGEFNQLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAK 91
AP V APDF A AV + EF +KLSD+ GK YV+LFFYPLDFTFVCPTE+ AFSD+
Sbjct: 67 APLVGNKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYD 126
Query: 92 DFAGIDCQVIGVSTDSEFS 110
+F ++ +++GVS DS +S
Sbjct: 127 EFEKLNTEILGVSIDSVWS 145
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 96.7 bits (230), Expect = 1e-20
Identities = 46/92 (50%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Query: 134 DYKKQISKDYDVLLDD-GFALRGLFIIDRNGTLRHMSVNDLPVGRSVDETLRLVKAFQFA 192
+++K ++ V +D G ALRGLFIID+ G ++H ++N+L +GRSVDETLR ++A Q+
Sbjct: 63 EFEKINTEVLGVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYV 122
Query: 193 DKH-GEVCPAGWNPDTNADTIKPNPKDSKEYF 223
++ EVCPAGW P ++KP+PKDSKEYF
Sbjct: 123 QENPDEVCPAGWKP--GEKSMKPDPKDSKEYF 152
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 77 FVCPTELIAFSDKAKDFAGIDCQVIGVSTDS 107
FV E+ AFSD+ ++F I+ +V+GVS DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 82.6 bits (195), Expect = 2e-16
Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 55 QLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLA 113
++++ DF G YV+LF +P DFT VC TEL A + AK+F +++G+S D SH
Sbjct: 56 KIRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKD 115
Query: 114 WINTPRNDGGLGKMEIPLLADYKKQISKDYDVLLDD-----GFAL--RGLFIIDRNGTLR 166
WI ++ P++AD ++ K +++ D G L R L I+ + ++
Sbjct: 116 WIKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVK 175
Query: 167 HMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNPDTNADTIKPNPKD--SKEYF 223
+ VGR++DE +R V A Q A KH P W P I P D +KE F
Sbjct: 176 LSFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERV-VIPPGVSDDEAKEKF 233
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 63.7 bits (148), Expect = 1e-10
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 55 QLKLSDFTGK-YVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLA 113
+++L DF G YV++F +P DFT VC TEL + A +F +++G S D SH
Sbjct: 21 KIRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKD 80
Query: 114 WINTPRNDGGLGKMEIPLLADYKKQISKDYDVLLDD-----GFAL--RGLFIIDRNGTLR 166
WI ++ P++AD ++ + +++ D G L R L I+ + ++
Sbjct: 81 WIKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVK 140
Query: 167 HMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNPDTNADTIKPNPKDSK 220
+ GR++ E LR A A +H P W P I P D +
Sbjct: 141 LSFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERV-VIPPGVSDEE 193
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 62.5 bits (145), Expect = 3e-10
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 56 LKLSDFTGKYVVLFFYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDSEFSHLAWI 115
+ LS F G+ VV++FYP D T C + AF D + F +VIG+S D SH +
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEFK 196
Query: 116 NTPRNDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRG--LFIIDRNGTLRHMSVNDL 173
K+ LL+D ++ K++ V D L G +++D+NG ++++ N
Sbjct: 197 KK-------YKLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVVQYIYNNQF 249
Query: 174 PVGRSVDETLRLVKA 188
+ + ETL+++++
Sbjct: 250 QPEKHIGETLKILQS 264
>06_03_0811 + 24830496-24831194
Length = 232
Score = 34.7 bits (76), Expect = 0.062
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 50 NGEFNQLKLSDFT-GKYVVLFFYPLDFTFVCPTELI-AFSDKAKDF--AGIDCQVIGVST 105
+GE + + D T GK VVLF P FT C + + F KA + G+D V VS
Sbjct: 89 DGELKTVTVRDLTAGKKVVLFAVPGAFTPTCTQKHVPGFVAKAGELRAKGVDA-VACVSV 147
Query: 106 DSEFSHLAWINTPRNDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRGLFIIDRNGTL 165
+ F AW + G+G E+ LL+D ++++ V LD GL + R L
Sbjct: 148 NDAFVMRAW----KESLGVGD-EVLLLSDGNGELARAMGVELDLSDKPAGLGVRSRRYAL 202
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 31.1 bits (67), Expect = 0.77
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 48 VVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCP-TELIA-FSDKAKDFAGIDCQVIGVST 105
+++ + +++ +SD GKYV L F + V T L+A F +K K+ G +V+ VS
Sbjct: 181 LLSNKGDRVPISDLEGKYVGLCFVVNGYGPVVQFTSLLAKFYEKLKE-VGEKFEVVAVSL 239
Query: 106 DSE-------FSHLAWINTPRND 121
DS+ F+ + W+ P+ D
Sbjct: 240 DSDEELSNESFAGMPWLAIPQED 262
>12_01_0029 +
248725-248769,248870-249074,250040-250128,250237-250315,
250429-250556,250764-250862,250953-251061,251301-251380,
251464-251691,251768-251833,251970-252086,252538-252735,
252847-252963,253056-253115,253228-253314,253419-253502,
253623-253757,253837-253899,253979-254083,254174-254286,
254374-254626,254715-254851,254970-255248,255352-256354,
256450-256935,257023-257193,257285-257470,257820-257942,
258024-258134,258225-258395
Length = 1708
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 133 ADYKKQISKDYDVLLDDGFALRGLFIIDRNGTLRHMSVNDLPV 175
A Y+ +IS D L + A G + I+R G + H +VND +
Sbjct: 305 AVYRNRISPDPIFLTAESSASGGFYAINRRGQVLHATVNDATI 347
>11_01_0030 +
233285-233329,233439-233643,234637-234725,234834-234912,
235048-235175,235383-235481,235572-235680,235920-235999,
236083-236310,236387-236452,236589-236705,237142-237339,
237451-237567,237660-237719,237832-237918,238023-238106,
238233-238367,238446-238508,238588-238692,238781-238893,
238981-239233,239322-239458,239577-239855,239958-240960,
241054-241539,241627-241797,241890-242075,242426-242548,
242630-242740,242834-243004
Length = 1708
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 133 ADYKKQISKDYDVLLDDGFALRGLFIIDRNGTLRHMSVNDLPV 175
A Y+ +IS D L + A G + I+R G + H +VND +
Sbjct: 305 AVYRNRISPDPIFLTAESSASGGFYAINRRGQVLHATVNDATI 347
>02_01_0449 -
3229260-3229365,3230264-3230396,3230536-3230625,
3231097-3231309,3232317-3232407,3232519-3232707,
3232810-3232920,3233018-3233110
Length = 341
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 46 TAVVNGEFNQLK-------LSDFTGKYVVLFFYPLDFTFVCPTELIAFS---DKAKDFAG 95
TA + G FN L DF GK+ +L+F +CP EL + DK K+ A
Sbjct: 178 TAAIGGPFNLLNHDGKPVTQKDFFGKWTLLYFGFTHCPDICPDELQKMALAIDKIKEKAK 237
Query: 96 IDCQVIGVSTDSE 108
++ + ++ D E
Sbjct: 238 MEVVPVFITVDPE 250
>01_06_1608 - 38612754-38616947,38617030-38617095
Length = 1419
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 2 SFIVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQK 38
SF+ +++SRS S +V R+ FST +T A + K
Sbjct: 165 SFLEEEISRSPYSVIVEVGPRMTFSTAFSTNAVSICK 201
>12_01_0286 -
2127622-2127897,2128611-2128997,2129195-2129550,
2129923-2130046,2130128-2130196,2131190-2131238,
2132222-2132336,2132854-2132903,2133000-2133137,
2134182-2134228
Length = 536
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 125 GKMEIPLLADYKKQISKDYDVLLDDGFA 152
G+ ++P Y +Q ++DYDVL D A
Sbjct: 341 GEQQMPYPEQYMQQSTQDYDVLADPNIA 368
>09_05_0015 -
20083143-20083308,20083645-20084017,20084362-20084675,
20085164-20085512,20085678-20085837,20086307-20086618,
20086700-20086820,20087225-20087277
Length = 615
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 135 YKKQISKDYDVLLDDGFALRGLFIIDRNGTL 165
Y++++ KD+ LLDD LF+I++ G +
Sbjct: 43 YRRRVLKDFSKLLDDEIEKIVLFMIEQQGLI 73
>01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048
Length = 162
Score = 27.9 bits (59), Expect = 7.1
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 63 GKYVVLFFYPLDFTFVCPTELI-AFSDKAKDF--AGIDCQVIGVSTDSEFSHLAWINT-P 118
GK VVLF P FT C + + F ++A+ G+D ++ VS + F AW + P
Sbjct: 35 GKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVD-DILLVSVNDPFVMKAWAKSYP 93
Query: 119 RNDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALR 154
N K L Y K + + D L + G +R
Sbjct: 94 ENKH--VKFLADGLGTYTKALGLELD-LSEKGLGIR 126
>09_02_0548 - 10467342-10468810,10470309-10471632
Length = 930
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 26 STTSTTRAPKVQKPAPDFSATAVVNGEFNQLKLSDFTGKYVVLFFYPLD 74
ST ++++AP +P S TA NG L D K + L LD
Sbjct: 10 STNNSSKAPATARPTTKGSTTASGNGRPPPTTLHDVPDKLLELILQNLD 58
>08_02_0076 +
11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 121 DGGLGKMEIPLLADYKKQISKDYDVLL 147
DGG+GK + L +SK +DVLL
Sbjct: 290 DGGIGKTTLAKLVFNNSTVSKHFDVLL 316
>06_01_0362 - 2587112-2587774
Length = 220
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 32 RAPKVQKPAPDFSATAVVNGE 52
R PK PAPD +A A VN E
Sbjct: 46 RKPKADDPAPDAAAAADVNAE 66
>03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171
Length = 1054
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 156 LFIIDRNGTLRHMSVNDLPVGRSVDETLRLVKAFQF 191
LF +RNG+ H S ++P G VD + + F F
Sbjct: 918 LFHRERNGSSSHYSDQNIPPGTVVDTVITHPREFDF 953
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.137 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,770,045
Number of Sequences: 37544
Number of extensions: 289958
Number of successful extensions: 518
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 493
Number of HSP's gapped (non-prelim): 20
length of query: 227
length of database: 14,793,348
effective HSP length: 80
effective length of query: 147
effective length of database: 11,789,828
effective search space: 1733104716
effective search space used: 1733104716
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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