GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000064-TA|BGIBMGA000064-PA|IPR000866|Alkyl hydroperoxide
reductase/ Thiol specific antioxidant/ Mal allergen,
IPR012336|Thioredoxin-like fold
         (227 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...   154   2e-39
AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin depend...    37   6e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   5.6  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.4  

>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score =  154 bits (373), Expect = 2e-39
 Identities = 69/94 (73%), Positives = 78/94 (82%)

Query: 112 LAWINTPRNDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRGLFIIDRNGTLRHMSVN 171
           LAWINTPR  GGLGK+E PLLAD  K+IS DY VLL DG +LRGLFIID  G +R +++N
Sbjct: 1   LAWINTPRKAGGLGKLEYPLLADLTKRISADYGVLLPDGISLRGLFIIDPAGVVRQITIN 60

Query: 172 DLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNP 205
           DLPVGRSVDETLRL+KAFQF +KHGEVCPA W P
Sbjct: 61  DLPVGRSVDETLRLIKAFQFVEKHGEVCPANWEP 94


>AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin dependent
           peroxidase protein.
          Length = 97

 Score = 36.7 bits (81), Expect = 6e-04
 Identities = 18/52 (34%), Positives = 24/52 (46%)

Query: 154 RGLFIIDRNGTLRHMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNP 205
           R +F+ID    LR   +     GR+  E LR + + Q  DK     PA W P
Sbjct: 4   RAVFVIDAGKKLRLSILYPATTGRNFAEILRTIDSMQLTDKRRVATPADWMP 55


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 73  LDFTFVCPTELIAFSDKAKDFAGIDCQVIGVSTDS 107
           +D TF  P+ ++  + +  DFA  D Q+I   T+S
Sbjct: 174 IDVTFATPSLVLHDTWEVLDFARSDHQLIRFETNS 208


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 70  FYPLDFTFVCPTELIAFSDKAKDFAGIDCQVIG 102
           FY  D    CP +   + D++     +DC   G
Sbjct: 749 FYACDCKMECPKQCTCYHDQSWSSNVVDCSRAG 781


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.137    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,419
Number of Sequences: 2123
Number of extensions: 10056
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 4
length of query: 227
length of database: 516,269
effective HSP length: 62
effective length of query: 165
effective length of database: 384,643
effective search space: 63466095
effective search space used: 63466095
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)