Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000060-TA|BGIBMGA000060-PA|IPR003018|GAF,
IPR002073|3'5'-cyclic nucleotide phosphodiesterase, IPR001998|Xylose
isomerase, IPR003607|Metal-dependent phosphohydrolase, HD region
(852 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.) 323 4e-88
SB_17862| Best HMM Match : No HMM Matches (HMM E-Value=.) 208 1e-53
SB_21890| Best HMM Match : PDEase_I (HMM E-Value=2.5e-07) 163 4e-40
SB_9575| Best HMM Match : PDEase_I (HMM E-Value=0.00012) 145 2e-34
SB_44184| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 3e-24
SB_8241| Best HMM Match : PDEase_I (HMM E-Value=0) 103 8e-22
SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 3e-20
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 5e-19
SB_6007| Best HMM Match : PDEase_I (HMM E-Value=0) 94 5e-19
SB_23141| Best HMM Match : GAF (HMM E-Value=0.00015) 75 2e-13
SB_25695| Best HMM Match : PDEase_I (HMM E-Value=3.1e-36) 65 2e-10
SB_56836| Best HMM Match : GAF (HMM E-Value=2.8e-07) 53 1e-06
SB_43076| Best HMM Match : PDEase_I (HMM E-Value=0.0034) 42 0.003
SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.2
SB_18927| Best HMM Match : GAF (HMM E-Value=0.18) 32 2.2
SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.0
>SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1879
Score = 323 bits (793), Expect = 4e-88
Identities = 158/330 (47%), Positives = 216/330 (65%), Gaps = 22/330 (6%)
Query: 289 LAVARSNKSLNISDVEQWLRDNNMSAGENSAGVRTLLCMPIVNANKDVIGVAQLINK--- 345
L V ++K+LNI D R + + +T+LCMPI NA+ D+IGV QL+NK
Sbjct: 1218 LLVDPTSKTLNIPDAYADERFDPTVDQVSGFTTKTILCMPIKNASGDIIGVVQLLNKVDG 1277
Query: 346 --FTEGDVSIFEAFAIFCGLGIHNTQMYENACKLMAKQKVALECLSYHATASAEDTSKLC 403
F + D ++FEAFAIFCG+ IH+T MYEN K MAK+KVALE
Sbjct: 1278 TPFNKNDENLFEAFAIFCGMAIHSTVMYENVNKAMAKRKVALE----------------- 1320
Query: 404 QDEIPSAETYNLYSFQFHDFDLTDEDTCRATLRMFLQCELVEKFHIPYDVLCRWILSVKK 463
++ +P + L F F D ++D+DT + L M ++VE F I Y LCR++L++KK
Sbjct: 1321 EEPLPPITSLRLIDFAFDDMSISDDDTLKGCLAMLCDLKIVETFQIDYLTLCRFVLTIKK 1380
Query: 464 NYRPVKYHNWRHALNVAQTMFAMLKTGKMERFMSDLEILGLLVACLCHDLDHRGTNNAFQ 523
NYRPV YHNWRHA NVAQTM+AMLK + ++ + +E L+VACL HDLDHRGTNN+FQ
Sbjct: 1381 NYRPVMYHNWRHAFNVAQTMYAMLKKPSIGKYFTVIEQYALIVACLSHDLDHRGTNNSFQ 1440
Query: 524 TKTESPLAILYSTSTMEHHHFDQCVMILNSESNNIFQALSPRDYKDVMHVVETAILSTDL 583
K+ +PLA LYSTSTMEHHHFDQC+MI+NS+ N IF LS +Y ++ ++E +I++TDL
Sbjct: 1441 IKSATPLAQLYSTSTMEHHHFDQCIMIINSQGNEIFNTLSADEYNKIIKLLEASIIATDL 1500
Query: 584 AMYFKKKSKFLELVDNGEFDWQAQEKKELL 613
A+YF+++ F + V+N E DW K+LL
Sbjct: 1501 ALYFQRRGDFFKKVENRELDWSDDSSKDLL 1530
Score = 53.2 bits (122), Expect = 8e-07
Identities = 24/43 (55%), Positives = 34/43 (79%)
Query: 186 QILLALARSIFEEQSNLECLVTKIMTEARDLLKCERCAVFILD 228
Q+LL LAR+IFEEQ++L +V KIM + LL+CERC+V ++D
Sbjct: 1179 QVLLDLARTIFEEQTSLHNIVHKIMMITQSLLQCERCSVLLVD 1221
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 51 YITIQFNSEIDARTGYKTELILCMPICNYEGDVVGVAQIINKTDG 95
Y +F+ +D +G+ T+ ILCMPI N GD++GV Q++NK DG
Sbjct: 1233 YADERFDPTVDQVSGFTTKTILCMPIKNASGDIIGVVQLLNKVDG 1277
Score = 49.2 bits (112), Expect = 1e-05
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 51 YITIQFNSEIDARTGYKTELILCMPICNYEGDVVGVAQIINKTDGE 96
Y +FN EID +TGY T ILCMPI +++G+V + + +N+ G+
Sbjct: 1106 YEDARFNKEIDKKTGYTTRSILCMPIKDHDGEVRRIRRYVNEPQGQ 1151
>SB_17862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 208 bits (509), Expect = 1e-53
Identities = 98/239 (41%), Positives = 152/239 (63%), Gaps = 7/239 (2%)
Query: 446 KFHIPYDVLCRWILSVKKNYRPVKYHNWRHALNVAQTMFAMLKTGKMERFMSDLEILGLL 505
K + + + R+ LSV+K YR + YHNW HA +VA +++ +++ K ++D E L L
Sbjct: 361 KGRVDLETIARFSLSVRKCYRDIPYHNWCHAFSVAHSLWIVIRDNKS---LTDYEKLSLF 417
Query: 506 VACLCHDLDHRGTNNAFQTKTESPLAILYSTSTMEHHHFDQCVMILNSESNNIFQALSPR 565
+A +CHD+DHRG NNAF ++PLA LY+TSTME HHF Q V IL SE N+F L
Sbjct: 418 IAGICHDVDHRGKNNAFMLHCKTPLANLYTTSTMEWHHFKQGVFILESEGQNVFGQLDAE 477
Query: 566 DYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEKKELLCGMMMTACDVSA 625
Y+ V+ +++ AI++TDL ++F K + L +N F W+ ++ + L+ ++MTACD+
Sbjct: 478 SYRRVLELIQEAIIATDLMLFFGNKKELETLQENKAFRWEEEKHRSLIRCLLMTACDLCT 537
Query: 626 IAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDREKKDELPQMQV---GFIDT 681
AKPW++Q V +EF+ QGD E+ ++ P+ MMDR K D+LP+ Q G+++T
Sbjct: 538 SAKPWDIQVVAVNKVFEEFYIQGD-EERKMGLDPLPMMDRSKHDDLPENQATVYGYMET 595
Score = 43.6 bits (98), Expect = 7e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 185 NQILLALARSIFEEQSNLECLVTKIMTEARDLLKCERCAVFILD 228
N LL + RSIF+E ++ ++ KIM A+ L+ +RC++F+LD
Sbjct: 239 NTFLLNVVRSIFDEVCTMDTVIEKIMAFAKKLVNADRCSLFLLD 282
Score = 35.9 bits (79), Expect = 0.14
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 55 QFNSEIDARTGYKTELILCMPI-CNYEGDVVGVAQ 88
+FN E+D +TGY T ILC+P+ C D+ +A+
Sbjct: 337 RFNREVDMKTGYTTHTILCVPVRCKGRVDLETIAR 371
>SB_21890| Best HMM Match : PDEase_I (HMM E-Value=2.5e-07)
Length = 229
Score = 163 bits (397), Expect = 4e-40
Identities = 74/129 (57%), Positives = 91/129 (70%)
Query: 589 KKSKFLELVDNGEFDWQAQEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQG 648
K+ F E++ DW A +ELL MMMTACDV+AI KPWE+Q +A++VA EFFDQG
Sbjct: 2 KRGTFQEILAEPNVDWSADNNRELLRAMMMTACDVAAITKPWEIQRVVAEMVASEFFDQG 61
Query: 649 DLEKLQLNQQPIAMMDREKKDELPQMQVGFIDTICLPLYKVLSDTFPWMTPLRTGTADNR 708
DLEK +LN +PI MMDR KK+ELP MQVGFID ICLP+Y++ P + PL G NR
Sbjct: 62 DLEKEKLNAEPIPMMDRRKKNELPSMQVGFIDFICLPIYELFYKLEPSLKPLLDGCQSNR 121
Query: 709 RRWQDLAEK 717
R WQ+L EK
Sbjct: 122 RHWQELGEK 130
>SB_9575| Best HMM Match : PDEase_I (HMM E-Value=0.00012)
Length = 286
Score = 145 bits (351), Expect = 2e-34
Identities = 65/102 (63%), Positives = 78/102 (76%)
Query: 616 MMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDREKKDELPQMQ 675
MMMTACDV+AI KPWE+Q +A++VA EFFDQGDLEK +LN +PI MMDR KK+ELP MQ
Sbjct: 1 MMMTACDVAAITKPWEIQRVVAEMVASEFFDQGDLEKEKLNAEPIPMMDRRKKNELPSMQ 60
Query: 676 VGFIDTICLPLYKVLSDTFPWMTPLRTGTADNRRRWQDLAEK 717
VGFID ICLP+Y++ P + PL G NRR WQ+L EK
Sbjct: 61 VGFIDFICLPIYELFYKLEPSLKPLLDGCQSNRRHWQELGEK 102
>SB_44184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 111 bits (266), Expect = 3e-24
Identities = 49/99 (49%), Positives = 69/99 (69%)
Query: 616 MMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDREKKDELPQMQ 675
MMMTACD++ KPWE+Q + LV EFF+QG +E+ + N +P+A+MDR+K DELP++Q
Sbjct: 1 MMMTACDLNGPTKPWEIQKEVVNLVPREFFEQGAMERERYNMEPMAIMDRQKIDELPKLQ 60
Query: 676 VGFIDTICLPLYKVLSDTFPWMTPLRTGTADNRRRWQDL 714
V F +T LP++KVL+ + PL G N+RRWQ L
Sbjct: 61 VQFFETTGLPVFKVLAKLNNKLQPLVDGAESNKRRWQKL 99
>SB_8241| Best HMM Match : PDEase_I (HMM E-Value=0)
Length = 388
Score = 103 bits (246), Expect = 8e-22
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 14/283 (4%)
Query: 442 ELVEKFHIPYDVLCRWILSVKKNY-RPVKYHNWRHALNVAQTMFAMLKTGKMERFMSDLE 500
+L++ F I ++ V+ +Y + V +HN HA +V QT +L + +DLE
Sbjct: 5 DLLKIFKIKPTTFINYMTLVENHYLKDVPFHNCIHAADVTQTAHVLLSAQAFDNVFTDLE 64
Query: 501 ILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMILNSESNNIF 559
IL ++A HD+DH G NN F T S +A++Y+ S +E+HH +L E +IF
Sbjct: 65 ILSAIIASAVHDVDHPGVNNHFLVATNSEMALMYNDESVLENHHLAVAFQLLQHEDCDIF 124
Query: 560 QALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVD--------NGEFDWQAQEKKE 611
+ LS ++ + ++ +L+TD A + + +V+ +G + +
Sbjct: 125 ENLSKQERQTARRMIIEMVLATDNAKHMSLLASLKTMVETKKVAGTGSGVLCLENYTDRM 184
Query: 612 LLCGMMMTACDVSAIAKPWEVQHRIAKLV---ADEFFDQGDLEKLQLNQQPIAMMDREKK 668
+ G + + K + +I K V +EFF QGD E+ + MMDR
Sbjct: 185 QVYGAIAQWYGLRLSTKRTRARTQIRKWVDRLMEEFFRQGDKERDIDGMEISPMMDRHNA 244
Query: 669 DELPQMQVGFIDTICLPLYKVLSDTFPWMTPLRTGTADNRRRW 711
+ + QV FID + PL++ + T ++ R+W
Sbjct: 245 -SIEKSQVVFIDFVAQPLWETWGELVQPDAQDLLDTIEDNRQW 286
>SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 97.9 bits (233), Expect = 3e-20
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 29/311 (9%)
Query: 435 LRMFLQCELVEKFHIPYDVLCRWILSVKKNY-RPVKYHNWRHALNVAQTMFAMLKTGKME 493
L++ + + EK +I D + W+ ++ NY R YHN HA +V L +++
Sbjct: 159 LKILNRFRVCEKLNISEDYVKNWLQLIEANYHRKNAYHNSTHAADVLHATAVFLAKERVK 218
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCV-MIL 551
+ L+ + L+A + HD+DH G N+F S LAILY+ + +E HH +
Sbjct: 219 AVLEPLDEVASLIAAIVHDVDHPGYTNSFLCNAGSELAILYNDIAVLESHHAALAFKLTA 278
Query: 552 NSESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVD---NGEFD----- 603
+ +NIF L +++ V + +++T++ +F+ SKF+ ++ + D
Sbjct: 279 RDDKSNIFSNLDVEEFRTVRQAIIDMVMATEMTRHFEHLSKFVNSINKRRSSSMDEVHSV 338
Query: 604 ----------------WQAQEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQ 647
E + L+ M++ D++ A+P + A +A+E+F Q
Sbjct: 339 HSGRGTPDSNTSTSTALNTPENRTLIKRMLIKCADIANPARPRYLCKEWAYRIAEEYFSQ 398
Query: 648 GDLEKLQLNQQPIAMMDREKKDELPQMQVGFIDTICLPLYKVLSDTFPWMTPLRTGTADN 707
D EK + + + DR + +P+ QV FID LY D F ++ DN
Sbjct: 399 TDEEKRRGLPVVMPVFDRATCN-VPRSQVWFIDYFVSDLYDAW-DAFAYVPETIRHLTDN 456
Query: 708 RRRWQDLAEKV 718
W+ A+++
Sbjct: 457 YDYWKKAADEL 467
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 93.9 bits (223), Expect = 5e-19
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 523 QTKTESPLAILYST-STMEHHHFDQCVMILNSESNNIFQALSPRDYKDVMHVVETAILST 581
+ + LA+ Y+ S +E+HH I+ + +NI Q +S +K + + ILST
Sbjct: 857 EINARTELALRYNDISPLENHHCAVAFDIMKQDKSNILQNVSAETFKKIREGMIKCILST 916
Query: 582 DLAMYFKKKSKFLELVDNGEFDWQAQEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVA 641
D+A + +KF EL+ +G F + + K +L +M+ DVS A+P +V +
Sbjct: 917 DMARHSDILNKFKELLKSG-FKFDDEAHKSMLMQIMIKVSDVSNEARPMDVAEPWLDCLL 975
Query: 642 DEFFDQGDLEKLQLNQQPIA-MMDREKKDELPQMQVGFIDTICLPLYKVLSDTFP 695
EFF Q D+EKL+ P+A MDR+K + P Q+GFI + +PL++ L + FP
Sbjct: 976 QEFFIQSDVEKLE--GLPVAPFMDRDKVTK-PSAQIGFIKFVLVPLFEALGELFP 1027
>SB_6007| Best HMM Match : PDEase_I (HMM E-Value=0)
Length = 511
Score = 93.9 bits (223), Expect = 5e-19
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 4/191 (2%)
Query: 499 LEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYST-STMEHHHFDQCVMILNSESN- 556
LE+L L A HD DH G NAF T S A+LY+ S +E+HH +L S+
Sbjct: 205 LELLSLYTAAAMHDYDHPGRTNAFLVATLSHQALLYNDRSVLENHHAAAAFTLLMSDPKY 264
Query: 557 NIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEKKELLCGM 616
N LSP ++K + AIL+TDL +F S F G +W ++ + L
Sbjct: 265 NFLCELSPAEFKRFRFLAIEAILATDLKRHFDILSDFNAKTAEGGVNWDSEADRLLTLQF 324
Query: 617 MMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDREKKDELPQMQV 676
+ D+S +K ++ + + +EF++QGD E+ + MDR+ + + Q+Q
Sbjct: 325 CIKMSDISGPSKRRDIHTLWTERIVEEFYEQGDDERAR-GMAVSPYMDRQ-QPHVAQLQD 382
Query: 677 GFIDTICLPLY 687
FI+ + PLY
Sbjct: 383 SFINHLVAPLY 393
Score = 33.9 bits (74), Expect = 0.55
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 424 DLTDEDTCR---ATLRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVKYHNWRHALNVA 480
DL D+ T + R+F E F IP + +++ Y + YHN HA +V
Sbjct: 79 DLKDDMTLPMVGVSYRIFQNAGFFEIFKIPERKFLNYFFALESGYHSIPYHNSIHASDVL 138
Query: 481 QTMFAMLKTGKMERF 495
Q ++ L T K+ F
Sbjct: 139 QGVY-FLTTAKIPGF 152
>SB_23141| Best HMM Match : GAF (HMM E-Value=0.00015)
Length = 346
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 355 EAFAIFCGLGIHNTQMYENACKLMAKQKVALECLSYHATASAEDTSKL 402
EAFAIFCGLGI+NT++YE ACKL+ KQKVA+E LSYHA+A + K+
Sbjct: 298 EAFAIFCGLGINNTKLYEEACKLLTKQKVAMEVLSYHASAQPAEVHKI 345
Score = 55.6 bits (128), Expect = 2e-07
Identities = 23/44 (52%), Positives = 36/44 (81%)
Query: 185 NQILLALARSIFEEQSNLECLVTKIMTEARDLLKCERCAVFILD 228
+++LL LA+SIFEEQ+N++ V I+ +A+ LL+CERC VF++D
Sbjct: 233 DEVLLQLAKSIFEEQTNVDDCVNNIIVQAQALLQCERCMVFLID 276
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 51 YITIQFNSEIDARTGYKTELILCMPICNYEGDVV 84
Y +FN ++D +TGY T ILCMPI N+E +V+
Sbjct: 203 YSDPRFNRDVDKKTGYTTHSILCMPIKNHEDEVL 236
>SB_25695| Best HMM Match : PDEase_I (HMM E-Value=3.1e-36)
Length = 646
Score = 65.3 bits (152), Expect = 2e-10
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 442 ELVEK-FHIPYDVLCRWILSVKKNYRPVK--YHNWRHALNVAQTMFAMLKTGKMERFMSD 498
E V+K F I L R++ V+ Y+ YHN HA +V T+ L+ + +++SD
Sbjct: 456 ENVQKAFEIHAMTLDRFLQDVETGYKRHSNPYHNDCHAADVTHTVHYFLECMGVSKYLSD 515
Query: 499 LEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYST--STMEHHHFDQ 546
LE+ GLL++ + HDL+H GT NAF + +++ T +T HF+Q
Sbjct: 516 LEVFGLLLSAIIHDLEHTGTTNAFHINSRDVRSLMIDTVLATDMSSHFEQ 565
Score = 39.5 bits (88), Expect = 0.011
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 568 KDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEKKELLCGMMMTACDVSAIA 627
+DV ++ +L+TD++ +F++ L L+ E +E++ +++ D+S
Sbjct: 544 RDVRSLMIDTVLATDMSSHFEQ----LRLMKVALVAGSPIENREVV-QLLLHVADISNPT 598
Query: 628 KPWEVQHRIAKLVADEFFDQGDLE-KLQLNQQPI 660
K W + + + +EFF QGD+E +L L+ P+
Sbjct: 599 KDWTIHRQWTTKIMEEFFTQGDMEIELGLDVSPL 632
>SB_56836| Best HMM Match : GAF (HMM E-Value=2.8e-07)
Length = 552
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 55 QFNSEIDARTGYKTELILCMPICNYEGD--VVGVAQIINKTDG 95
+FN ++D +TGY T+ +LC P+ N EG+ VVGVAQIINK G
Sbjct: 293 RFNQDVDKQTGYHTKSLLCKPVKNNEGEVRVVGVAQIINKNPG 335
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 146 GSKEFSSRDVEVFRRYLTFCGIGIQNAQLFESSVLEYKRNQI 187
G F+ D +V YLTFCGIGI NA+LFE S +E+ RN++
Sbjct: 335 GGVPFTKEDEKVCDMYLTFCGIGITNAKLFELSAIEFNRNRL 376
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 8/59 (13%)
Query: 322 RTLLCMPIVNANKDV--IGVAQLINK------FTEGDVSIFEAFAIFCGLGIHNTQMYE 372
++LLC P+ N +V +GVAQ+INK FT+ D + + + FCG+GI N +++E
Sbjct: 307 KSLLCKPVKNNEGEVRVVGVAQIINKNPGGVPFTKEDEKVCDMYLTFCGIGITNAKLFE 365
>SB_43076| Best HMM Match : PDEase_I (HMM E-Value=0.0034)
Length = 233
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 523 QTKTESPLAILYST--STMEHHHFDQCVMILNSESNNIFQALS 563
+T S LA LYS+ S ME HHF Q V ILNS NIF+ L+
Sbjct: 89 ETVRNSTLAALYSSEGSVMERHHFAQTVCILNSSGCNIFKNLT 131
Score = 39.5 bits (88), Expect = 0.011
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 324 LLCMPIVNANKDVIGVAQLINK-----FTEGDVSIFEAFAIFCGLGIHNTQMYE 372
+LC PI + + VIGVA+L NK FT+ D + AFAI+CG+ I + E
Sbjct: 3 ILCFPIKD-DDGVIGVAELCNKANGKCFTKFDEDLTRAFAIYCGISIFHVSEEE 55
Score = 29.9 bits (64), Expect = 9.0
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 71 ILCMPICNYEGDVVGVAQIINKTDGEHTTE 100
ILC PI + +G V+GVA++ NK +G+ T+
Sbjct: 3 ILCFPIKDDDG-VIGVAELCNKANGKCFTK 31
>SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 448 HIPYDVLCRWILSVKKN-YRPVKYHNWRHALNVAQTMFAMLKTG-KMERFMSDL 499
H+ D+ ++ + + +RP KYH + H N AM TG K+ R + DL
Sbjct: 7 HVTEDLFMEYVHGLSCDAFRPEKYHLFEHNCNTFSNEIAMFLTGQKIPRHIQDL 60
>SB_18927| Best HMM Match : GAF (HMM E-Value=0.18)
Length = 234
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/37 (32%), Positives = 27/37 (72%)
Query: 192 ARSIFEEQSNLECLVTKIMTEARDLLKCERCAVFILD 228
+RSIF++ +++ ++ KIM A+ L+ +R ++F++D
Sbjct: 107 SRSIFQDIVSMDTVIMKIMNYAQTLVDADRTSLFLVD 143
>SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 29.9 bits (64), Expect = 9.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 687 YKVLSDTFPWMTPLRTGTADNRRRWQDLA 715
Y+V + W TP++TG+A+ RW ++
Sbjct: 417 YEVTNPNAYWSTPIKTGSANQMLRWSPMS 445
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.134 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,293,211
Number of Sequences: 59808
Number of extensions: 1059337
Number of successful extensions: 2023
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1964
Number of HSP's gapped (non-prelim): 49
length of query: 852
length of database: 16,821,457
effective HSP length: 88
effective length of query: 764
effective length of database: 11,558,353
effective search space: 8830581692
effective search space used: 8830581692
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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