Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000060-TA|BGIBMGA000060-PA|IPR003018|GAF,
IPR002073|3'5'-cyclic nucleotide phosphodiesterase, IPR001998|Xylose
isomerase, IPR003607|Metal-dependent phosphohydrolase, HD region
(852 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80032-1|AAB53879.2| 568|Caenorhabditis elegans Phosphodiestera... 305 1e-82
Z12017-9|CAH19088.1| 856|Caenorhabditis elegans Hypothetical pr... 209 7e-54
Z12017-7|CAE47469.1| 734|Caenorhabditis elegans Hypothetical pr... 209 7e-54
Z12017-6|CAA78052.2| 859|Caenorhabditis elegans Hypothetical pr... 209 7e-54
Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical pr... 132 1e-30
AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 120 6e-27
U28729-6|AAA68292.1| 549|Caenorhabditis elegans Phosphodiestera... 117 4e-26
U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiestera... 117 4e-26
U28729-4|AAN60496.1| 599|Caenorhabditis elegans Phosphodiestera... 117 4e-26
U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiestera... 117 4e-26
U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiestera... 117 4e-26
U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiestera... 117 4e-26
AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 110 5e-24
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 99 1e-20
Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical pr... 99 1e-20
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 99 1e-20
AL132949-41|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 99 1e-20
AL132949-40|CAC35868.2| 472|Caenorhabditis elegans Hypothetical... 99 1e-20
>U80032-1|AAB53879.2| 568|Caenorhabditis elegans Phosphodiesterase
protein 5 protein.
Length = 568
Score = 305 bits (748), Expect = 1e-82
Identities = 162/398 (40%), Positives = 237/398 (59%), Gaps = 10/398 (2%)
Query: 282 DALPAIALAVARSNKSLNISDVEQWLRDNNMSAGENSAGVRTLLCMPIVNANKDVIGVAQ 341
D IA VA + + LNI + + R N + +T+LCMPI+ VIGV Q
Sbjct: 153 DMSKGIAGYVASTGEGLNIENAYEDERFNADVDSKTGYTTKTILCMPIL-IRGIVIGVVQ 211
Query: 342 LINK----FTEGDVSIFEAFAIFCGLGIHNTQMYENACKLMAKQKVALECLSYHATASAE 397
++NK FT D FE FA++CGL +H+ ++Y+ + K +VALE L+YH+ +A+
Sbjct: 212 MVNKHDGVFTRQDEDAFEIFAVYCGLALHHAKLYDKIRRSEQKYRVALEVLAYHSVCNAD 271
Query: 398 DTSKLCQDEIPSAETYNLYSFQFHDFDLTDEDTCRATLRMFLQCELVEKFHIPYDVLCRW 457
+ +KL + EI + L + F+ L++ + + MF + + + L R+
Sbjct: 272 EVNKLKKIEINN-RIVELETIDFNGMRLSELEKPLYAVYMF-KTLFADTLRFDTEDLIRF 329
Query: 458 ILSVKKNYRPVKYHNWRHALNVAQTMFAMLKTGKMERFMSDLEILGLLVACLCHDLDHRG 517
+L+V+KNYR V YHNW H +VA MFA L + F + LE L L V+CLCHDLDHRG
Sbjct: 330 VLTVRKNYRRVAYHNWAHGWSVAHAMFATLMNSP-DAF-TKLEALALYVSCLCHDLDHRG 387
Query: 518 TNNAFQTKTESPLAILYSTSTMEHHHFDQCVMILNSESNNIFQALSPRDYKDVMHVVETA 577
NNA+ +PLA +YSTS ME HHF+Q V IL + +NI ++LS DYK + +++
Sbjct: 388 KNNAYMKTMSTPLASIYSTSVMERHHFNQTVTILQQDGHNILKSLSSEDYKKTLSLIKHC 447
Query: 578 ILSTDLAMYFKKKSKFLELVDNGEFDWQAQEKKELLCGMMMTACDVSAIAKPWEVQHRIA 637
IL+TDLA++F K+K ++DN FD QE + L +MMT CD+ A AKPW +Q
Sbjct: 448 ILATDLALFFSNKAKLNVILDNNTFDINRQEHRLLTQAVMMTGCDLVASAKPWNIQTETV 507
Query: 638 KLVADEFFDQGDLEKLQLNQQPIAMMDREKKDELPQMQ 675
K++ +EF+DQGD E+L ++PI MMDR++ LPQMQ
Sbjct: 508 KVIFEEFYDQGDAERLS-GKEPIPMMDRQQAHMLPQMQ 544
Score = 53.6 bits (123), Expect = 6e-07
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 55 QFNSEIDARTGYKTELILCMPICNYEGDVVGVAQIINKTDGEHTTE 100
+FN+++D++TGY T+ ILCMPI G V+GV Q++NK DG T +
Sbjct: 179 RFNADVDSKTGYTTKTILCMPIL-IRGIVIGVVQMVNKHDGVFTRQ 223
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 168 GIQNAQLFESSVLEYKRNQILLALARSIFEEQSNLECLVTKIMTEARDLLKCERCAVFIL 227
G + E+ + K + LL +ARSIF + +++ ++ K+M A+ L+ +R ++F++
Sbjct: 59 GSDGQDIHENIAKQRKLSNFLLDVARSIFHDIVSMDAVIIKVMNFAQKLVDADRASLFLV 118
Query: 228 DTDHCE 233
D+ + +
Sbjct: 119 DSKNAQ 124
>Z12017-9|CAH19088.1| 856|Caenorhabditis elegans Hypothetical
protein R08D7.6c protein.
Length = 856
Score = 209 bits (510), Expect = 7e-54
Identities = 134/439 (30%), Positives = 225/439 (51%), Gaps = 14/439 (3%)
Query: 291 VARSNKSLNISDVEQWLRDNNMSAGENSAGVRTLLCMPIVNANKDVIGVAQLINK---FT 347
VA + +++NI DV + N + S R L+ P+++++ +IGV L NK F+
Sbjct: 232 VASTMRTMNIRDVSRCPFFNEEIDEQFSIKARNLIAFPLIDSSCSLIGVIVLYNKENGFS 291
Query: 348 EGDVSIFEAFAIFCGLGIHNTQMYENACKLMAKQKVALECLSYHATASAE--DTSKLCQD 405
D + F+ F I + + + ++ + + E A E D +L D
Sbjct: 292 RHDEKYIKRFSYFVANSIAHAILAKQIEEVRTRIHMVEEFKIQGEDAVIEEVDIMRLVND 351
Query: 406 EIPSAETY--NLYSFQFHDFDLTDEDTCRATLRMFLQCELVEKFHIPYDVLCRWILSVKK 463
+ + N F F + + RA++ F + + L +L V
Sbjct: 352 PLRDWRYFSQNFADFSFPPRSVGENHFHRASMMFFEDLGFSMLYKLNKRKLSYLVLRVSA 411
Query: 464 NYRPVKYHNWRHALNVAQTMFAMLKTGKMERFMSDLEILGLLVACLCHDLDHRGTNNAFQ 523
YRPV YHNW HA V + L+T + R +SD+E L LL+ACLCHD+DHRGT N+FQ
Sbjct: 412 GYRPVPYHNWSHAFAVTHFCWLTLRTDAIRRALSDMERLSLLIACLCHDIDHRGTTNSFQ 471
Query: 524 TKT--ESPLAILYST--STMEHHHFDQCVMILNSESNNIFQALSPRDYKDVMHVVETAIL 579
++ ++PL++LYST S +E HHF Q + +L E +I + L D++ +++ + IL
Sbjct: 472 MQSLQKTPLSVLYSTEGSVLERHHFAQTIKLLQQEECSILENLPAADFRTIVNTIREVIL 531
Query: 580 STDLAMYFKKKSKFLELVDNGEFDWQAQEKKELLCGMMMTACDVSAIAKPWEVQHRIAKL 639
+TD++ + +K+ + ++ G ++ + + + LL ++MTA D+S AK + RIA+
Sbjct: 532 ATDISAHLRKQERIKTMISEG-YNPMSFDHRYLLMCLVMTASDLSDQAKNFHNAKRIAEN 590
Query: 640 VADEFFDQGDLEKLQLNQQPIAMMDREKKDELPQMQVGFIDTICLPLYKVLSDTFPWMTP 699
+ EFF QGDLE LQL +P+ MMDR +P +Q+ F+ I +P++++L+ P
Sbjct: 591 IYLEFFAQGDLE-LQLGVKPLEMMDRTNA-YVPTVQIDFLFKIGVPVFQLLASVVPEGRT 648
Query: 700 LRTGTADNRRRWQDLAEKV 718
N W L E+V
Sbjct: 649 TSEAIDANHLCWVALDEEV 667
>Z12017-7|CAE47469.1| 734|Caenorhabditis elegans Hypothetical
protein R08D7.6b protein.
Length = 734
Score = 209 bits (510), Expect = 7e-54
Identities = 134/439 (30%), Positives = 225/439 (51%), Gaps = 14/439 (3%)
Query: 291 VARSNKSLNISDVEQWLRDNNMSAGENSAGVRTLLCMPIVNANKDVIGVAQLINK---FT 347
VA + +++NI DV + N + S R L+ P+++++ +IGV L NK F+
Sbjct: 235 VASTMRTMNIRDVSRCPFFNEEIDEQFSIKARNLIAFPLIDSSCSLIGVIVLYNKENGFS 294
Query: 348 EGDVSIFEAFAIFCGLGIHNTQMYENACKLMAKQKVALECLSYHATASAE--DTSKLCQD 405
D + F+ F I + + + ++ + + E A E D +L D
Sbjct: 295 RHDEKYIKRFSYFVANSIAHAILAKQIEEVRTRIHMVEEFKIQGEDAVIEEVDIMRLVND 354
Query: 406 EIPSAETY--NLYSFQFHDFDLTDEDTCRATLRMFLQCELVEKFHIPYDVLCRWILSVKK 463
+ + N F F + + RA++ F + + L +L V
Sbjct: 355 PLRDWRYFSQNFADFSFPPRSVGENHFHRASMMFFEDLGFSMLYKLNKRKLSYLVLRVSA 414
Query: 464 NYRPVKYHNWRHALNVAQTMFAMLKTGKMERFMSDLEILGLLVACLCHDLDHRGTNNAFQ 523
YRPV YHNW HA V + L+T + R +SD+E L LL+ACLCHD+DHRGT N+FQ
Sbjct: 415 GYRPVPYHNWSHAFAVTHFCWLTLRTDAIRRALSDMERLSLLIACLCHDIDHRGTTNSFQ 474
Query: 524 TKT--ESPLAILYST--STMEHHHFDQCVMILNSESNNIFQALSPRDYKDVMHVVETAIL 579
++ ++PL++LYST S +E HHF Q + +L E +I + L D++ +++ + IL
Sbjct: 475 MQSLQKTPLSVLYSTEGSVLERHHFAQTIKLLQQEECSILENLPAADFRTIVNTIREVIL 534
Query: 580 STDLAMYFKKKSKFLELVDNGEFDWQAQEKKELLCGMMMTACDVSAIAKPWEVQHRIAKL 639
+TD++ + +K+ + ++ G ++ + + + LL ++MTA D+S AK + RIA+
Sbjct: 535 ATDISAHLRKQERIKTMISEG-YNPMSFDHRYLLMCLVMTASDLSDQAKNFHNAKRIAEN 593
Query: 640 VADEFFDQGDLEKLQLNQQPIAMMDREKKDELPQMQVGFIDTICLPLYKVLSDTFPWMTP 699
+ EFF QGDLE LQL +P+ MMDR +P +Q+ F+ I +P++++L+ P
Sbjct: 594 IYLEFFAQGDLE-LQLGVKPLEMMDRTNA-YVPTVQIDFLFKIGVPVFQLLASVVPEGRT 651
Query: 700 LRTGTADNRRRWQDLAEKV 718
N W L E+V
Sbjct: 652 TSEAIDANHLCWVALDEEV 670
>Z12017-6|CAA78052.2| 859|Caenorhabditis elegans Hypothetical
protein R08D7.6a protein.
Length = 859
Score = 209 bits (510), Expect = 7e-54
Identities = 134/439 (30%), Positives = 225/439 (51%), Gaps = 14/439 (3%)
Query: 291 VARSNKSLNISDVEQWLRDNNMSAGENSAGVRTLLCMPIVNANKDVIGVAQLINK---FT 347
VA + +++NI DV + N + S R L+ P+++++ +IGV L NK F+
Sbjct: 235 VASTMRTMNIRDVSRCPFFNEEIDEQFSIKARNLIAFPLIDSSCSLIGVIVLYNKENGFS 294
Query: 348 EGDVSIFEAFAIFCGLGIHNTQMYENACKLMAKQKVALECLSYHATASAE--DTSKLCQD 405
D + F+ F I + + + ++ + + E A E D +L D
Sbjct: 295 RHDEKYIKRFSYFVANSIAHAILAKQIEEVRTRIHMVEEFKIQGEDAVIEEVDIMRLVND 354
Query: 406 EIPSAETY--NLYSFQFHDFDLTDEDTCRATLRMFLQCELVEKFHIPYDVLCRWILSVKK 463
+ + N F F + + RA++ F + + L +L V
Sbjct: 355 PLRDWRYFSQNFADFSFPPRSVGENHFHRASMMFFEDLGFSMLYKLNKRKLSYLVLRVSA 414
Query: 464 NYRPVKYHNWRHALNVAQTMFAMLKTGKMERFMSDLEILGLLVACLCHDLDHRGTNNAFQ 523
YRPV YHNW HA V + L+T + R +SD+E L LL+ACLCHD+DHRGT N+FQ
Sbjct: 415 GYRPVPYHNWSHAFAVTHFCWLTLRTDAIRRALSDMERLSLLIACLCHDIDHRGTTNSFQ 474
Query: 524 TKT--ESPLAILYST--STMEHHHFDQCVMILNSESNNIFQALSPRDYKDVMHVVETAIL 579
++ ++PL++LYST S +E HHF Q + +L E +I + L D++ +++ + IL
Sbjct: 475 MQSLQKTPLSVLYSTEGSVLERHHFAQTIKLLQQEECSILENLPAADFRTIVNTIREVIL 534
Query: 580 STDLAMYFKKKSKFLELVDNGEFDWQAQEKKELLCGMMMTACDVSAIAKPWEVQHRIAKL 639
+TD++ + +K+ + ++ G ++ + + + LL ++MTA D+S AK + RIA+
Sbjct: 535 ATDISAHLRKQERIKTMISEG-YNPMSFDHRYLLMCLVMTASDLSDQAKNFHNAKRIAEN 593
Query: 640 VADEFFDQGDLEKLQLNQQPIAMMDREKKDELPQMQVGFIDTICLPLYKVLSDTFPWMTP 699
+ EFF QGDLE LQL +P+ MMDR +P +Q+ F+ I +P++++L+ P
Sbjct: 594 IYLEFFAQGDLE-LQLGVKPLEMMDRTNA-YVPTVQIDFLFKIGVPVFQLLASVVPEGRT 651
Query: 700 LRTGTADNRRRWQDLAEKV 718
N W L E+V
Sbjct: 652 TSEAIDANHLCWVALDEEV 670
>Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical
protein T04D3.3 protein.
Length = 664
Score = 132 bits (319), Expect = 1e-30
Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 437 MFLQCELVEKFHIPYDVLCRWILSVKKNYRPVK--YHNWRHALNVAQTMFAMLKTGKMER 494
+F + +++F +P L ++ +++ Y YHN HA +V Q+ ML +
Sbjct: 297 LFNRYGFMDRFKVPLTALENYLSALEVGYSKHNNPYHNVVHAADVTQSSHFMLSQTGLAN 356
Query: 495 FMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMILNS 553
+ DLE+L +L L HD +H G N F +++S A+LY+ S +E+HH C ++
Sbjct: 357 SLGDLELLAVLFGALIHDYEHTGHTNNFHIQSQSQFAMLYNDRSVLENHHVSSCFRLMKE 416
Query: 554 ESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEKKELL 613
+ NI L+ +YK++ ++V +L+TD++ +F + ++ E +K + L
Sbjct: 417 DDKNILTHLTRDEYKELRNMVIEIVLATDMSTHFMQIKTMKSMLSLPE----GIDKNKAL 472
Query: 614 CGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLE-KLQLNQQPIAMMDREKKDELP 672
C +++ ACD+S AKPW + R + V +EFF QGDLE + L P+ DR +
Sbjct: 473 C-LIVHACDISHPAKPWNLHERWTEGVLEEFFRQGDLEASMGLPYSPLC--DRHTV-HVA 528
Query: 673 QMQVGFIDTICLPLYKVLSD 692
Q+GFID I P V +
Sbjct: 529 DSQIGFIDFIVEPTMVVCGE 548
>AC024877-3|AAF60898.1| 760|Caenorhabditis elegans
Phosphodiesterase protein 6, isoforma protein.
Length = 760
Score = 120 bits (288), Expect = 6e-27
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 6/282 (2%)
Query: 435 LRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVK-YHNWRHALNVAQTMFAMLKTGKME 493
+++F + ++ + D+L RWILS++ +Y YHN HA +V Q L + +
Sbjct: 465 MKVFERWKVCDVLGCSDDLLHRWILSIEAHYHAGNTYHNATHAADVLQATSFFLDSPSVA 524
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMI-L 551
+++ + L+A HDLDH G NA+ T LAILY+ S +E+HH + L
Sbjct: 525 VHVNESHAVAALLAAAVHDLDHPGRGNAYLINTRQSLAILYNDNSILENHHIALAFQLTL 584
Query: 552 NSESN-NIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEKK 610
+N NIF +LS ++ + H + +L+TD++ +F+ +KF ++ + Q
Sbjct: 585 QHNANVNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTNS 644
Query: 611 ELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDREKKDE 670
+C M++ D+S A+ W + R A + +E+F+Q EK + + + DR +
Sbjct: 645 LTICDMLVKCADISNPAREWGLCQRWAHRIVEEYFEQTREEKEKGLPVTMEVFDRNTCN- 703
Query: 671 LPQMQVGFIDTICLPLYKVLSDTFPWMTPLRTGTADNRRRWQ 712
+P Q GFID + ++ F + L N +W+
Sbjct: 704 VPITQCGFIDMFAREAFATFTE-FAKLGELSDQLESNYEKWK 744
>U28729-6|AAA68292.1| 549|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforma protein.
Length = 549
Score = 117 bits (281), Expect = 4e-26
Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 434 TLRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVKYHNWRHALNVAQTMFAMLKTGKME 493
T + Q L + F I L ++L+++ +YR YHN+ HA +VAQ+M +L + +
Sbjct: 245 TFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQSMHVLLMSPVLT 304
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMILN 552
+DLE+L + A HD+DH G N + + + LAI+Y+ S +E HH +L
Sbjct: 305 EVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLAVAFKLLQ 364
Query: 553 SESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVD------NGEFDWQA 606
+ + LS + +V +L+TD++ + + +V+ N
Sbjct: 365 DSNCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAGNNVIVLDK 424
Query: 607 QEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDRE 666
K + M+ D+S KP E+ + + + +E++ QGD EK +L + M DR
Sbjct: 425 YNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEK-ELGLEISPMCDRG 483
Query: 667 KKDELPQMQVGFIDTICLPLYKVLSD-TFPWMTPLRTGTADNRRRWQD-LAEKVDMGLTW 724
+ + QVGFID I PLY+ +D +P + +NR +Q + E+ D T
Sbjct: 484 NV-TIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRIPEEPDTARTV 542
Query: 725 IDHD 728
+ D
Sbjct: 543 TEDD 546
>U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformd protein.
Length = 674
Score = 117 bits (281), Expect = 4e-26
Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 434 TLRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVKYHNWRHALNVAQTMFAMLKTGKME 493
T + Q L + F I L ++L+++ +YR YHN+ HA +VAQ+M +L + +
Sbjct: 370 TFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQSMHVLLMSPVLT 429
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMILN 552
+DLE+L + A HD+DH G N + + + LAI+Y+ S +E HH +L
Sbjct: 430 EVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLAVAFKLLQ 489
Query: 553 SESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVD------NGEFDWQA 606
+ + LS + +V +L+TD++ + + +V+ N
Sbjct: 490 DSNCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAGNNVIVLDK 549
Query: 607 QEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDRE 666
K + M+ D+S KP E+ + + + +E++ QGD EK +L + M DR
Sbjct: 550 YNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEK-ELGLEISPMCDRG 608
Query: 667 KKDELPQMQVGFIDTICLPLYKVLSD-TFPWMTPLRTGTADNRRRWQD-LAEKVDMGLTW 724
+ + QVGFID I PLY+ +D +P + +NR +Q + E+ D T
Sbjct: 609 NV-TIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRIPEEPDTARTV 667
Query: 725 IDHD 728
+ D
Sbjct: 668 TEDD 671
>U28729-4|AAN60496.1| 599|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformc protein.
Length = 599
Score = 117 bits (281), Expect = 4e-26
Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 434 TLRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVKYHNWRHALNVAQTMFAMLKTGKME 493
T + Q L + F I L ++L+++ +YR YHN+ HA +VAQ+M +L + +
Sbjct: 295 TFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQSMHVLLMSPVLT 354
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMILN 552
+DLE+L + A HD+DH G N + + + LAI+Y+ S +E HH +L
Sbjct: 355 EVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLAVAFKLLQ 414
Query: 553 SESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVD------NGEFDWQA 606
+ + LS + +V +L+TD++ + + +V+ N
Sbjct: 415 DSNCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAGNNVIVLDK 474
Query: 607 QEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDRE 666
K + M+ D+S KP E+ + + + +E++ QGD EK +L + M DR
Sbjct: 475 YNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEK-ELGLEISPMCDRG 533
Query: 667 KKDELPQMQVGFIDTICLPLYKVLSD-TFPWMTPLRTGTADNRRRWQD-LAEKVDMGLTW 724
+ + QVGFID I PLY+ +D +P + +NR +Q + E+ D T
Sbjct: 534 NV-TIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRIPEEPDTARTV 592
Query: 725 IDHD 728
+ D
Sbjct: 593 TEDD 596
>U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforme protein.
Length = 612
Score = 117 bits (281), Expect = 4e-26
Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 434 TLRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVKYHNWRHALNVAQTMFAMLKTGKME 493
T + Q L + F I L ++L+++ +YR YHN+ HA +VAQ+M +L + +
Sbjct: 308 TFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQSMHVLLMSPVLT 367
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMILN 552
+DLE+L + A HD+DH G N + + + LAI+Y+ S +E HH +L
Sbjct: 368 EVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLAVAFKLLQ 427
Query: 553 SESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVD------NGEFDWQA 606
+ + LS + +V +L+TD++ + + +V+ N
Sbjct: 428 DSNCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAGNNVIVLDK 487
Query: 607 QEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDRE 666
K + M+ D+S KP E+ + + + +E++ QGD EK +L + M DR
Sbjct: 488 YNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEK-ELGLEISPMCDRG 546
Query: 667 KKDELPQMQVGFIDTICLPLYKVLSD-TFPWMTPLRTGTADNRRRWQD-LAEKVDMGLTW 724
+ + QVGFID I PLY+ +D +P + +NR +Q + E+ D T
Sbjct: 547 NV-TIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRIPEEPDTARTV 605
Query: 725 IDHD 728
+ D
Sbjct: 606 TEDD 609
>U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformb protein.
Length = 626
Score = 117 bits (281), Expect = 4e-26
Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 434 TLRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVKYHNWRHALNVAQTMFAMLKTGKME 493
T + Q L + F I L ++L+++ +YR YHN+ HA +VAQ+M +L + +
Sbjct: 322 TFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQSMHVLLMSPVLT 381
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMILN 552
+DLE+L + A HD+DH G N + + + LAI+Y+ S +E HH +L
Sbjct: 382 EVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLAVAFKLLQ 441
Query: 553 SESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVD------NGEFDWQA 606
+ + LS + +V +L+TD++ + + +V+ N
Sbjct: 442 DSNCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAGNNVIVLDK 501
Query: 607 QEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDRE 666
K + M+ D+S KP E+ + + + +E++ QGD EK +L + M DR
Sbjct: 502 YNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEK-ELGLEISPMCDRG 560
Query: 667 KKDELPQMQVGFIDTICLPLYKVLSD-TFPWMTPLRTGTADNRRRWQD-LAEKVDMGLTW 724
+ + QVGFID I PLY+ +D +P + +NR +Q + E+ D T
Sbjct: 561 NV-TIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRIPEEPDTARTV 619
Query: 725 IDHD 728
+ D
Sbjct: 620 TEDD 623
>U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformg protein.
Length = 673
Score = 117 bits (281), Expect = 4e-26
Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 434 TLRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVKYHNWRHALNVAQTMFAMLKTGKME 493
T + Q L + F I L ++L+++ +YR YHN+ HA +VAQ+M +L + +
Sbjct: 369 TFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQSMHVLLMSPVLT 428
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMILN 552
+DLE+L + A HD+DH G N + + + LAI+Y+ S +E HH +L
Sbjct: 429 EVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLAVAFKLLQ 488
Query: 553 SESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVD------NGEFDWQA 606
+ + LS + +V +L+TD++ + + +V+ N
Sbjct: 489 DSNCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAGNNVIVLDK 548
Query: 607 QEKKELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIAMMDRE 666
K + M+ D+S KP E+ + + + +E++ QGD EK +L + M DR
Sbjct: 549 YNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEK-ELGLEISPMCDRG 607
Query: 667 KKDELPQMQVGFIDTICLPLYKVLSD-TFPWMTPLRTGTADNRRRWQD-LAEKVDMGLTW 724
+ + QVGFID I PLY+ +D +P + +NR +Q + E+ D T
Sbjct: 608 NV-TIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRIPEEPDTARTV 666
Query: 725 IDHD 728
+ D
Sbjct: 667 TEDD 670
>AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans
Phosphodiesterase protein 6, isoformb protein.
Length = 697
Score = 110 bits (264), Expect = 5e-24
Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 4/217 (1%)
Query: 435 LRMFLQCELVEKFHIPYDVLCRWILSVKKNYRPVK-YHNWRHALNVAQTMFAMLKTGKME 493
+++F + ++ + D+L RWILS++ +Y YHN HA +V Q L + +
Sbjct: 465 MKVFERWKVCDVLGCSDDLLHRWILSIEAHYHAGNTYHNATHAADVLQATSFFLDSPSVA 524
Query: 494 RFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVMI-L 551
+++ + L+A HDLDH G NA+ T LAILY+ S +E+HH + L
Sbjct: 525 VHVNESHAVAALLAAAVHDLDHPGRGNAYLINTRQSLAILYNDNSILENHHIALAFQLTL 584
Query: 552 NSESN-NIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEKK 610
+N NIF +LS ++ + H + +L+TD++ +F+ +KF ++ + Q
Sbjct: 585 QHNANVNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTNS 644
Query: 611 ELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQ 647
+C M++ D+S A+ W + R A + +E+F+Q
Sbjct: 645 LTICDMLVKCADISNPAREWGLCQRWAHRIVEEYFEQ 681
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 99.1 bits (236), Expect = 1e-20
Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 43/355 (12%)
Query: 398 DTSKLCQDEIPSAETYNLYSFQFHDFDLTDEDTC--RATLRMFLQCELVEKFHIPYDVLC 455
DT +L D P ++SF T R T +F Q EL F +
Sbjct: 183 DTRELDTD--PDLAETAVWSFPIFQMSRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFF 240
Query: 456 RWILSVKKNYRPVKYHNWRHALNV-----------AQTMFAMLKT--------------G 490
+ +++K Y + YHN HA +V ++ F KT
Sbjct: 241 NFFHALEKGYWEIPYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHS 300
Query: 491 KMERFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVM 549
+ +S LE++ L A HD DH G NAF + E AILY+ S +E+HH +
Sbjct: 301 SIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWK 360
Query: 550 ILNSESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEK 609
+LN N+ + L P + K ++V IL+TDL +F+ F E + E D Q +
Sbjct: 361 LLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLT--EIDVQVETD 418
Query: 610 KELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIA-MMDREKK 668
+ L+ +++ D+++ KP+ + + + +EF++QGD E+ + PI MDR
Sbjct: 419 RLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRR--GLPITPYMDRGDA 476
Query: 669 DELPQMQVGFIDTICLPLYKVLSD--TFPWMTPLRT-----GTADNRRRWQDLAE 716
++ ++Q FI + PL +++ P + L T N R+W++ E
Sbjct: 477 -QVAKLQDSFIAHVVSPLATAMNECGLLPILPGLDTSELIINMEHNHRKWKEQIE 530
>Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 99.1 bits (236), Expect = 1e-20
Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 43/355 (12%)
Query: 398 DTSKLCQDEIPSAETYNLYSFQFHDFDLTDEDTC--RATLRMFLQCELVEKFHIPYDVLC 455
DT +L D P ++SF T R T +F Q EL F +
Sbjct: 62 DTRELDTD--PDLAETAVWSFPIFQMSRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFF 119
Query: 456 RWILSVKKNYRPVKYHNWRHALNV-----------AQTMFAMLKT--------------G 490
+ +++K Y + YHN HA +V ++ F KT
Sbjct: 120 NFFHALEKGYWEIPYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHS 179
Query: 491 KMERFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVM 549
+ +S LE++ L A HD DH G NAF + E AILY+ S +E+HH +
Sbjct: 180 SIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWK 239
Query: 550 ILNSESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEK 609
+LN N+ + L P + K ++V IL+TDL +F+ F E + E D Q +
Sbjct: 240 LLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLT--EIDVQVETD 297
Query: 610 KELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIA-MMDREKK 668
+ L+ +++ D+++ KP+ + + + +EF++QGD E+ + PI MDR
Sbjct: 298 RLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRR--GLPITPYMDRGDA 355
Query: 669 DELPQMQVGFIDTICLPLYKVLSD--TFPWMTPLRT-----GTADNRRRWQDLAE 716
++ ++Q FI + PL +++ P + L T N R+W++ E
Sbjct: 356 -QVAKLQDSFIAHVVSPLATAMNECGLLPILPGLDTSELIINMEHNHRKWKEQIE 409
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 99.1 bits (236), Expect = 1e-20
Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 43/355 (12%)
Query: 398 DTSKLCQDEIPSAETYNLYSFQFHDFDLTDEDTC--RATLRMFLQCELVEKFHIPYDVLC 455
DT +L D P ++SF T R T +F Q EL F +
Sbjct: 183 DTRELDTD--PDLAETAVWSFPIFQMSRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFF 240
Query: 456 RWILSVKKNYRPVKYHNWRHALNV-----------AQTMFAMLKT--------------G 490
+ +++K Y + YHN HA +V ++ F KT
Sbjct: 241 NFFHALEKGYWEIPYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHS 300
Query: 491 KMERFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVM 549
+ +S LE++ L A HD DH G NAF + E AILY+ S +E+HH +
Sbjct: 301 SIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWK 360
Query: 550 ILNSESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEK 609
+LN N+ + L P + K ++V IL+TDL +F+ F E + E D Q +
Sbjct: 361 LLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLT--EIDVQVETD 418
Query: 610 KELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIA-MMDREKK 668
+ L+ +++ D+++ KP+ + + + +EF++QGD E+ + PI MDR
Sbjct: 419 RLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRR--GLPITPYMDRGDA 476
Query: 669 DELPQMQVGFIDTICLPLYKVLSD--TFPWMTPLRT-----GTADNRRRWQDLAE 716
++ ++Q FI + PL +++ P + L T N R+W++ E
Sbjct: 477 -QVAKLQDSFIAHVVSPLATAMNECGLLPILPGLDTSELIINMEHNHRKWKEQIE 530
>AL132949-41|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 99.1 bits (236), Expect = 1e-20
Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 43/355 (12%)
Query: 398 DTSKLCQDEIPSAETYNLYSFQFHDFDLTDEDTC--RATLRMFLQCELVEKFHIPYDVLC 455
DT +L D P ++SF T R T +F Q EL F +
Sbjct: 183 DTRELDTD--PDLAETAVWSFPIFQMSRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFF 240
Query: 456 RWILSVKKNYRPVKYHNWRHALNV-----------AQTMFAMLKT--------------G 490
+ +++K Y + YHN HA +V ++ F KT
Sbjct: 241 NFFHALEKGYWEIPYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHS 300
Query: 491 KMERFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVM 549
+ +S LE++ L A HD DH G NAF + E AILY+ S +E+HH +
Sbjct: 301 SIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWK 360
Query: 550 ILNSESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEK 609
+LN N+ + L P + K ++V IL+TDL +F+ F E + E D Q +
Sbjct: 361 LLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLT--EIDVQVETD 418
Query: 610 KELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIA-MMDREKK 668
+ L+ +++ D+++ KP+ + + + +EF++QGD E+ + PI MDR
Sbjct: 419 RLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRR--GLPITPYMDRGDA 476
Query: 669 DELPQMQVGFIDTICLPLYKVLSD--TFPWMTPLRT-----GTADNRRRWQDLAE 716
++ ++Q FI + PL +++ P + L T N R+W++ E
Sbjct: 477 -QVAKLQDSFIAHVVSPLATAMNECGLLPILPGLDTSELIINMEHNHRKWKEQIE 530
>AL132949-40|CAC35868.2| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 99.1 bits (236), Expect = 1e-20
Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 43/355 (12%)
Query: 398 DTSKLCQDEIPSAETYNLYSFQFHDFDLTDEDTC--RATLRMFLQCELVEKFHIPYDVLC 455
DT +L D P ++SF T R T +F Q EL F +
Sbjct: 62 DTRELDTD--PDLAETAVWSFPIFQMSRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFF 119
Query: 456 RWILSVKKNYRPVKYHNWRHALNV-----------AQTMFAMLKT--------------G 490
+ +++K Y + YHN HA +V ++ F KT
Sbjct: 120 NFFHALEKGYWEIPYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHS 179
Query: 491 KMERFMSDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYS-TSTMEHHHFDQCVM 549
+ +S LE++ L A HD DH G NAF + E AILY+ S +E+HH +
Sbjct: 180 SIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWK 239
Query: 550 ILNSESNNIFQALSPRDYKDVMHVVETAILSTDLAMYFKKKSKFLELVDNGEFDWQAQEK 609
+LN N+ + L P + K ++V IL+TDL +F+ F E + E D Q +
Sbjct: 240 LLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLT--EIDVQVETD 297
Query: 610 KELLCGMMMTACDVSAIAKPWEVQHRIAKLVADEFFDQGDLEKLQLNQQPIA-MMDREKK 668
+ L+ +++ D+++ KP+ + + + +EF++QGD E+ + PI MDR
Sbjct: 298 RLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRR--GLPITPYMDRGDA 355
Query: 669 DELPQMQVGFIDTICLPLYKVLSD--TFPWMTPLRT-----GTADNRRRWQDLAE 716
++ ++Q FI + PL +++ P + L T N R+W++ E
Sbjct: 356 -QVAKLQDSFIAHVVSPLATAMNECGLLPILPGLDTSELIINMEHNHRKWKEQIE 409
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.134 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,524,462
Number of Sequences: 27539
Number of extensions: 810743
Number of successful extensions: 2147
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2071
Number of HSP's gapped (non-prelim): 31
length of query: 852
length of database: 12,573,161
effective HSP length: 88
effective length of query: 764
effective length of database: 10,149,729
effective search space: 7754392956
effective search space used: 7754392956
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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