Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000059-TA|BGIBMGA000059-PA|undefined
         (195 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.53 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   4.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 88  PESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDE 124
           P  +   Y A+ + K  Q  +QNK  + R +  C +E
Sbjct: 469 PTLDATSYYAKDLEKQRQQCNQNKCPVKRGNGRCDEE 505


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 67  TIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSS 107
           +++V  +++    CE+  GLS  S ++  +A +V  S +S+
Sbjct: 187 SVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKLSPKSA 227


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 67  TIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSS 107
           +++V  +++    CE+  GLS  S ++  +A +V  S +S+
Sbjct: 135 SVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKLSPKSA 175


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 67  TIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSS 107
           +++V  +++    CE+  GLS  S ++  +A +V  S +S+
Sbjct: 318 SVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKLSPKSA 358


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/37 (27%), Positives = 21/37 (56%)

Query: 123 DEDVQELKKFLEGKPKLLERYLKECASADEVNRIHSV 159
           D  V+E K F++   K+ E++     ++DE+ +  S+
Sbjct: 691 DSTVEEAKTFVDRCYKMQEQFTLNFRNSDELIKFISI 727


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)

Query: 101 HKSEQSSDQNKEVIDRI 117
           HK  ++SD++ E+ DR+
Sbjct: 564 HKLAEASDKDPEMYDRV 580


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)

Query: 176 TSVTSDLFQLWLSSS 190
           T VT +LFQ  LSSS
Sbjct: 398 TKVTCELFQATLSSS 412


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 151 DEVNRIHSVTSSAPLSPRPHHEARSTSVT 179
           +E +   +V SS PL P      R+T  T
Sbjct: 147 EEADAASNVISSTPLPPTTSTTTRTTLTT 175


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/23 (26%), Positives = 17/23 (73%)

Query: 141 ERYLKECASADEVNRIHSVTSSA 163
           ++Y K+C+S    +++++ T+S+
Sbjct: 41  QQYTKDCSSPTPSDKLNTSTTSS 63


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.307    0.124    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,841
Number of Sequences: 317
Number of extensions: 1657
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 195
length of database: 114,650
effective HSP length: 54
effective length of query: 141
effective length of database: 97,532
effective search space: 13752012
effective search space used: 13752012
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.1 bits)
S2: 41 (20.6 bits)