Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000059-TA|BGIBMGA000059-PA|undefined
(195 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 33 0.13
At4g19000.1 68417.m02798 IWS1 C-terminus family protein contains... 32 0.29
At3g60840.1 68416.m06806 microtubule associated protein (MAP65/A... 32 0.29
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 31 0.39
At2g26310.1 68415.m03157 expressed protein 31 0.51
At1g22060.1 68414.m02759 expressed protein 31 0.51
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 31 0.68
At5g55520.1 68418.m06915 expressed protein weak similarity to ph... 31 0.68
At2g45900.1 68415.m05708 expressed protein 31 0.68
At2g22610.1 68415.m02680 kinesin motor protein-related 31 0.68
At1g56660.1 68414.m06516 expressed protein 30 0.90
At5g40450.1 68418.m04905 expressed protein 30 1.2
At5g38150.1 68418.m04598 expressed protein 30 1.2
At1g36580.1 68414.m04546 2,4-dienoyl-CoA reductase-related low s... 30 1.2
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 29 1.6
At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related... 29 1.6
At3g15960.1 68416.m02018 DNA mismatch repair MutS family protein... 29 1.6
At3g03010.1 68416.m00296 expressed protein 29 2.1
At1g74650.1 68414.m08645 myb family transcription factor (cY13) ... 29 2.1
At1g08600.1 68414.m00953 SNF2 domain-containing protein / helica... 29 2.1
At5g13260.1 68418.m01523 expressed protein 29 2.7
At4g16830.1 68417.m02540 nuclear RNA-binding protein (RGGA) iden... 29 2.7
At4g08280.1 68417.m01368 expressed protein hypothetical protein ... 29 2.7
At3g57980.1 68416.m06462 DNA-binding bromodomain-containing prot... 29 2.7
At1g69480.1 68414.m07983 EXS family protein / ERD1/XPR1/SYG1 fam... 29 2.7
At5g09830.1 68418.m01137 BolA-like family protein contains Pfam ... 28 3.6
At4g18140.1 68417.m02696 NLI interacting factor (NIF) family pro... 28 3.6
At3g28925.1 68416.m03612 hypothetical protein 28 3.6
At1g76140.1 68414.m08842 prolyl oligopeptidase, putative / proly... 28 3.6
At5g07790.1 68418.m00892 expressed protein 28 4.8
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 28 4.8
At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putati... 28 4.8
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 28 4.8
At1g79460.1 68414.m09261 ent-kaurene synthase / ent-kaurene synt... 28 4.8
At1g65020.1 68414.m07369 expressed protein 28 4.8
At1g20380.1 68414.m02542 prolyl oligopeptidase, putative / proly... 28 4.8
At4g32820.1 68417.m04668 expressed protein ; expression supporte... 27 6.3
At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PS... 27 6.3
At3g56860.3 68416.m06325 UBP1 interacting protein 2a (UBA2a) ide... 27 6.3
At3g56860.2 68416.m06324 UBP1 interacting protein 2a (UBA2a) ide... 27 6.3
At3g56860.1 68416.m06323 UBP1 interacting protein 2a (UBA2a) ide... 27 6.3
At3g24520.1 68416.m03079 heat shock transcription factor family ... 27 6.3
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 27 6.3
At2g40060.1 68415.m04922 expressed protein 27 6.3
At1g47550.1 68414.m05278 expressed protein 27 6.3
At5g46840.1 68418.m05771 RNA recognition motif (RRM)-containing ... 27 8.4
At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identic... 27 8.4
At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identic... 27 8.4
At2g40140.1 68415.m04937 zinc finger (CCCH-type) family protein ... 27 8.4
At2g38823.1 68415.m04770 expressed protein 27 8.4
At2g10350.1 68415.m01087 Ulp1 protease family protein similar to... 27 8.4
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 27 8.4
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 33.1 bits (72), Expect = 0.13
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 33 QTDKETGQKRSLELMRLVYELPEDIKEI-MHTENPTIEVTEQKSCDVQCEEYYGLSPESE 91
+T E +L V +L E+ +E+ MH N +E+ E+K+ E+ + E +
Sbjct: 970 KTRLEVSSSDQQQLETNVKQLLEEKEELAMHLANSLLEMEEEKAIWSSKEKALTEAVEEK 1029
Query: 92 RKLYEAQSVHK-SEQSSDQNKE----------VIDRISPECSDEDVQELKKFLEGKPKLL 140
+LY+ + S++ S++ KE + DR+ CS+E+ ++ K+ K +
Sbjct: 1030 IRLYKNIQIESLSKEMSEEKKELESCRLECVTLADRL--RCSEENAKQDKESSLEKSLEI 1087
Query: 141 ERYLKECASADEVNR 155
+R E SAD V++
Sbjct: 1088 DRLGDELRSADAVSK 1102
>At4g19000.1 68417.m02798 IWS1 C-terminus family protein contains
Pfam profile PF05909: IWS1 C-terminus
Length = 406
Score = 31.9 bits (69), Expect = 0.29
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 26 QEINEGSQTDKETGQ---KRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEE 82
+E+ ++ K TG+ K+S+ + LV E+ ED+ + + + +K + +E
Sbjct: 13 KELEGENEESKFTGRRLVKKSISVPELVDEVEEDLDDFTEPADDFNDKVGKKRQRKKKDE 72
Query: 83 YYGLSPESERKLYEAQSVHKSEQS--SDQNKEVIDRI---SPECSDEDVQELKKFLEGKP 137
GL + K ++ V + S ++ N + D++ P+ DED +E+KK +
Sbjct: 73 S-GLEKTKKNKKQNSEEVQEMWDSITNNTNSQYGDKVVVKPPKKKDEDAEEIKKLFSLRK 131
Query: 138 K 138
K
Sbjct: 132 K 132
>At3g60840.1 68416.m06806 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 648
Score = 31.9 bits (69), Expect = 0.29
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 14/159 (8%)
Query: 31 GSQTD---KETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTE------QKSCDVQCE 81
G+ TD K ++ L L RL EL + E+ + ++ +E E C V E
Sbjct: 110 GNPTDYLKKFAAEETDLSLQRLE-ELRSQLGELQNEKSKRLEEVECLLKTLNSLCSVLGE 168
Query: 82 EYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLE 141
++ G+ L ++ + S + D+ +D + + +Q ++K + LLE
Sbjct: 169 DFKGMIRGIHSSLVDSNTRDVSRSTLDK----LDMMIVNLREAKLQRMQKVQDLAVSLLE 224
Query: 142 RYLKECASADEVNRIHSVTSSAPLSPRPHHEARSTSVTS 180
+ A+E H+VT S L+ EA SV S
Sbjct: 225 LWNLLDTPAEEQKIFHNVTCSIALTESEITEANILSVAS 263
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 31.5 bits (68), Expect = 0.39
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 35 DKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKL 94
+K ++R++E R E +KE E E E++ + + E + L E ER++
Sbjct: 682 EKAENERRAVEA-REKAEQERKMKEQQELELQLKEAFEKEEENRRMREAFALEQEKERRI 740
Query: 95 YEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLERYLKECASADEVN 154
EA+ + E++ + KE ++ E Q LK LE + K ER +KE +E
Sbjct: 741 KEAR---EKEENERRIKEAREKAELE------QRLKATLEQEEK--ERQIKERQEREENE 789
Query: 155 R 155
R
Sbjct: 790 R 790
>At2g26310.1 68415.m03157 expressed protein
Length = 398
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 56 DIKEIMHTENPTI-EVTEQKSCDVQCEEYYGLS 87
D+K + E+ T E TE ++C V CEEY GLS
Sbjct: 149 DVKLRENIEHRTCPENTEHRTCQVGCEEYSGLS 181
>At1g22060.1 68414.m02759 expressed protein
Length = 1999
Score = 31.1 bits (67), Expect = 0.51
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 29 NEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSP 88
NE + + + KRS EL + EL D + +++ + + ++ C
Sbjct: 1621 NEARKKAESSQLKRSKELEGKILELEADRQSVIYDKREKTTAYDMMKAELDCSLLSLECC 1680
Query: 89 ESERKLYEAQSVHKSEQSSDQNKEVIDR--ISPECSDE---DVQELKKFLEGKPKLLERY 143
+ E++ EA EQS +KE+ R + CS + +++E + +L ++
Sbjct: 1681 KEEKQKLEAILQQCKEQSLKMSKELESRRGLVQRCSSQKNIEMEENDRLNSEVSELADKN 1740
Query: 144 LKECASADEVN 154
+S D VN
Sbjct: 1741 TIAVSSGDSVN 1751
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 87 SPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLER 142
+PE +++ + + V +E KE ++ I P S+ E+KKF K K+++R
Sbjct: 331 NPEEKQEEGDPELVEDAEFYRQLLKEFLETIDPASSEAAFYEMKKFQTKKRKVVDR 386
>At5g55520.1 68418.m06915 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333; expression supported
by MPSS
Length = 802
Score = 30.7 bits (66), Expect = 0.68
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 27 EINEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGL 86
E+ Q K T RS L+R +++ + I +TEN + + E++ + E +
Sbjct: 494 ELKSKLQPTKSTDNVRSSLLLRS-FQMRKSIDFTKNTENNSEALEEERERWTEMESEWIS 552
Query: 87 SPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLERYLKE 146
+ R ++ H + + KE + ++E L + + G + +E+Y +
Sbjct: 553 LTDDLRMDIDSHRRHAEDLEIELKKEKM------ATEELNDALSRAMLGHSRFIEQYTEL 606
Query: 147 CASADEVNRIHSVT 160
DE++ HSVT
Sbjct: 607 QEKYDELDERHSVT 620
>At2g45900.1 68415.m05708 expressed protein
Length = 720
Score = 30.7 bits (66), Expect = 0.68
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 48 RLVYELPEDIKEIMHTENPTIE--VTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQ 105
+L+ + K I+ N E V +Q +CD C+E +S +KL EA+ K+ Q
Sbjct: 35 KLLMDKKRRSKRIIIGNNGVFETKVEKQLTCDCDCDEESEAEMQSVKKLIEAEIDEKTTQ 94
Query: 106 SSDQNKEVIDRISPECS--DEDVQEL 129
+ R S CS ED+ L
Sbjct: 95 KCEARNR--KRRSRTCSKISEDINVL 118
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 30.7 bits (66), Expect = 0.68
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 21 CANIAQEINEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQ- 79
C+N+ Q++ E +E Q S + V +L ++KE +E ++ V +QK D +
Sbjct: 844 CSNLQQKVKELECKLRERHQSDSAANNQKVKDLENNLKE---SEGSSL-VWQQKVKDYEN 899
Query: 80 -CEEYYGLSPESERKLYEAQSVHKSEQSSD 108
+E G S ++K+ E + HK EQS +
Sbjct: 900 KLKESEGNSLVWQQKIKELEIKHKDEQSQE 929
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 30.3 bits (65), Expect = 0.90
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 26 QEINEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYG 85
+E + + ET QK++ + + + +D+KE ENP +E TE S D++ EE
Sbjct: 346 KETKDKDDDEGETKQKKNKKKEKKSEKGEKDVKEDKKKENP-LE-TEVMSRDIKLEE--- 400
Query: 86 LSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLE 141
PE+E+K E + ++S + E + +D ++ KK +PK+ E
Sbjct: 401 --PEAEKK--EEDDTEEKKKSKVEGGE--SEEGKKKKKKDKKKNKKKDTKEPKMTE 450
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 29.9 bits (64), Expect = 1.2
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 7/147 (4%)
Query: 20 ECANIAQEINEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVT--EQKSCD 77
E N+ I E + E E ++ E E +K TE + EVT K D
Sbjct: 558 ETENVKIVIEEPEIVNNEETSVHESESLKENAEPVEAVKNSDGTEQISREVTVDRAKEED 617
Query: 78 V--QCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEG 135
+ + EE ES+ L + V +++++ V++R +C + + ++ +
Sbjct: 618 IAPKTEEIQERPSESKASLEPKEEVDHISNETEEHEHVLERDVQQCETIESEAVETKEDT 677
Query: 136 KPKLLERYLKECASADEVNRIHSVTSS 162
+P L LKE +E +V SS
Sbjct: 678 QPSL---DLKEDKETEEAETFKTVFSS 701
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 68 IEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPEC 121
IE ++ ++ G ESE L + V +S + +++++ V++R P+C
Sbjct: 1290 IEKVQEGPTVIETPTIQGEDIESETSLELKEEVDQSSKDTEEHEHVLERDIPQC 1343
>At5g38150.1 68418.m04598 expressed protein
Length = 574
Score = 29.9 bits (64), Expect = 1.2
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 32 SQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESE 91
S+ D ET + R + V + E++ ++ N + E+ ++ EE Y
Sbjct: 41 SRRDSETVKARVEAGLSEVKKSVEELALLIKRSNRSAGFQEKDMEVLKMEEKYA----EV 96
Query: 92 RKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLERYLKECASAD 151
++ E S D + +I+R++ E E V+EL+ EG +LLE KE A+
Sbjct: 97 MRVLEVVKEEVSRVKLDVSSVLIERVAAE---EKVEELRFKTEGGLRLLESLKKEIEVAN 153
Query: 152 E 152
E
Sbjct: 154 E 154
>At1g36580.1 68414.m04546 2,4-dienoyl-CoA reductase-related low
similarity to peroxisomal 2,4-dienoyl-CoA reductase
[Homo sapiens] GI:9967554
Length = 237
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 74 KSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELK--- 130
K C ++ + +G PE + K +++S + + D+ + DR+ + DE + K
Sbjct: 120 KECSIKTKNVFGALPEEKYKSLDSKSADDALEKEDKLRSAFDRV--QALDETMVNQKGIL 177
Query: 131 KFLEGKPKLLERYLKECASADEVNRIHS 158
++E K K C + + S
Sbjct: 178 AYIEKKKKKKRMATSACVPTMSITWVKS 205
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 29.5 bits (63), Expect = 1.6
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 9/148 (6%)
Query: 26 QEINEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYG 85
+E EG +T KE + E R E + ++ E T+++ + +E
Sbjct: 741 KEGGEGEETQKEANESTKKERKRKKSESKK--------QSDGEEETQKEPSESTKKERKR 792
Query: 86 LSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDV-QELKKFLEGKPKLLERYL 144
+PES++K + ++S + K+ R P+ +E+V E +K + K K E
Sbjct: 793 KNPESKKKAEAVEEEETRKESVESTKKERKRKKPKHDEEEVPNETEKPEKKKKKKREGKS 852
Query: 145 KECASADEVNRIHSVTSSAPLSPRPHHE 172
K+ + E + + P S P E
Sbjct: 853 KKKETETEFSGAELYVTFGPGSSLPKKE 880
>At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related
protein (PAKRP1)
Length = 1292
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/105 (21%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 42 RSLELMRLVYELPEDIKEIMHTENPTIEVT--EQKSCDVQCE-EYYGLSPESERKLYEAQ 98
++ L++L Y+ P + I +++ ++E T +++ C + E ++ LS E +L ++
Sbjct: 1000 KTCTLLKLSYQAPP-VNAIPESQDESLEKTLEQERLCWTEAETKWISLSEELRTELEASK 1058
Query: 99 SVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLERY 143
++ + Q E+ I C +E + ++ +EG ++LE+Y
Sbjct: 1059 AL-----INKQKHEL--EIEKRCGEELKEAMQMAMEGHARMLEQY 1096
>At3g15960.1 68416.m02018 DNA mismatch repair MutS family protein
contains Pfam profile PF05188: MutS domain II
Length = 474
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 96 EAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLERYLKECASADEVNR 155
E + QSS + +S E + ED ++ KF+E + L + +S DEVNR
Sbjct: 48 EVTKIESESQSSSSEQNTKLSMSEE-NQEDSFDVDKFIESEAVSSREELGQSSSMDEVNR 106
>At3g03010.1 68416.m00296 expressed protein
Length = 179
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 116 RISPECSDEDVQELKKFLEGKPKLLERYLKECASADEVNRIHSVTSSAPLSPRPHHEARS 175
+I+ +CS + KK L+ PK L R+ + CA V +I S L R
Sbjct: 82 KIAAQCSHATLGLYKKLLQRAPKALNRW-EYCAQPKVVVKIESEEEMLVLQERAKTLKLP 140
Query: 176 TSVTSD 181
T +T D
Sbjct: 141 THITID 146
>At1g74650.1 68414.m08645 myb family transcription factor (cY13)
similar to myb protein cY13 GI:928930 from [Arabidopsis
thaliana]; contains Pfam profile: PF00249 myb
DNA-binding domain; identical to cDNA cY13 gene
GI:928929
Length = 330
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 130 KKFLEGKPKLLERYLKECASADEVNRIHSVTSSAPLSPRPHHE-----ARSTSVTSDLFQ 184
+K L+ + ++ L + S D+ + S+ P SP+PHH A ST S L Q
Sbjct: 160 EKKLQTDINMAKQALFQALSLDQPS---SLIPPDPDSPKPHHHSTTTYASSTDNISKLLQ 216
Query: 185 LWLSSSPVK 193
W SSS K
Sbjct: 217 NWTSSSSSK 225
>At1g08600.1 68414.m00953 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P46100
Transcriptional regulator ATRX {Homo sapiens}; contains
PFam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain;
non-consensus GC donor splice site at exon boundary
28614
Length = 1457
Score = 29.1 bits (62), Expect = 2.1
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 39 GQKRSLELMRLVYELPEDIKEIMHTENPTIE--VTEQKSCDVQCEEYYGLSPES----ER 92
G+ LE ++ E ED +I+ EN E V E K+ D + E+ L E+ E+
Sbjct: 10 GKIEKLEGKEVIVESKEDEMDIIIEENREAEQEVMEVKARDGRGEQNDVLMEENNNQGEQ 69
Query: 93 KLYEAQSVHKSEQSSDQNKEVIDRISPECSDE 124
K E Q +SSD N + ++I DE
Sbjct: 70 KDEEMQDASSRSESSDFNSDEDEQILSRRDDE 101
>At5g13260.1 68418.m01523 expressed protein
Length = 537
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 163 APLSPRPHHEARSTSVTS 180
AP SP HH ARS+SVT+
Sbjct: 28 APSSPARHHHARSSSVTN 45
>At4g16830.1 68417.m02540 nuclear RNA-binding protein (RGGA)
identical to nuclear RNA binding protein GI:6492264 from
[Arabidopsis thaliana]
Length = 355
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 89 ESERKLYEAQSVHKSEQSSDQNKE--VIDRISPECSDEDVQELKKFLEGKPKLLE 141
E+E+ + E +V + ++D NKE V++ PE + + E +K LE K K L+
Sbjct: 191 ETEKDVGEKPAV--DDVAADANKEDTVVEEKEPEDKEMTLDEYEKILEEKKKALQ 243
>At4g08280.1 68417.m01368 expressed protein hypothetical protein
ssr1391 - Synechocystis sp. (strain PCC
6803),PIR2:S75571
Length = 126
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 87 SPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQE 128
+PE ER Y+ + ++++SD +EV+ R+SP S E +Q+
Sbjct: 79 NPEWERA-YQYEIPVLAKENSDGKEEVLPRLSPRLSAELIQK 119
>At3g57980.1 68416.m06462 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 632
Score = 28.7 bits (61), Expect = 2.7
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 29 NEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSP 88
N+ S R++++ V E P I + E P E + + SC+ +E P
Sbjct: 154 NDNSPGTGSENTNRAVKIAEPVDEEPNRIGGEDNDEKPAREDSGRGSCESVAKESDRAEP 213
Query: 89 ESE----RKLYEAQSVHKSEQSSDQ-----------NKEVIDRISPECSDEDVQELKKFL 133
+ E +L E+ K E+ + + KE +D+ P+ D+ + K F+
Sbjct: 214 KREGNDSPELVESMDESKGEEDTKETSDGQSSASFPRKETVDQDQPDNKDQSLTVNKIFV 273
Query: 134 EGKP 137
E +P
Sbjct: 274 ESQP 277
>At1g69480.1 68414.m07983 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 777
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 89 ESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPK 138
E RKLYE + + KSE+ + + ++ DE++ ++ KF K K
Sbjct: 87 EGSRKLYETKFLKKSEEGGEFEESFFKKL-----DENLNKVNKFYRDKVK 131
>At5g09830.1 68418.m01137 BolA-like family protein contains Pfam
profile: PF01722 BolA-like protein
Length = 93
Score = 28.3 bits (60), Expect = 3.6
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 112 EVIDRISPEC-SDEDVQELKKFLEGKPKLLERY-LKECASADEVNRIHSVTSSAPLSPRP 169
EVID IS C S +V+ + + EGK +LLER+ + A +E+ IH+++ +P+
Sbjct: 21 EVID-ISGGCGSSFEVEVVSEQFEGK-RLLERHRMVNAALEEEMKEIHALSIKKAQTPQQ 78
Query: 170 HHEARSTSVT 179
S T
Sbjct: 79 WKPPSQDSAT 88
>At4g18140.1 68417.m02696 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 312
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 66 PTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSD 123
P +E S DV+ +E ++ + L A++ ++EQ+ D + ++ R PE +D
Sbjct: 120 PYLEDRSASSDDVKSDEDNRINRSRSKNLEAAENHTEAEQTEDFDPQIFLRNQPELAD 177
>At3g28925.1 68416.m03612 hypothetical protein
Length = 247
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 89 ESERKLYEAQSVH---KSEQSSDQNKEVIDRISPECSDEDVQELKK 131
ES ++L E +SVH K Q +N+E+ D+ CS+ + +K+
Sbjct: 17 ESNKELKELESVHVKHKKRQEMLRNRELSDKGRKSCSNHLYESMKQ 62
>At1g76140.1 68414.m08842 prolyl oligopeptidase, putative / prolyl
endopeptidase, putative / post-proline cleaving enzyme,
putative similar to SP|Q9QUR6 Prolyl endopeptidase (EC
3.4.21.26) (Post-proline cleaving enzyme) {Mus
musculus}; contains Pfam profiles PF00326: prolyl
oligopeptidase family, PF02897: Prolyl oligopeptidase,
N-terminal beta-propeller domain
Length = 731
Score = 28.3 bits (60), Expect = 3.6
Identities = 9/33 (27%), Positives = 23/33 (69%)
Query: 123 DEDVQELKKFLEGKPKLLERYLKECASADEVNR 155
D D +E+K+F++ + KL + L++C + +++ +
Sbjct: 40 DPDAEEVKEFVQSQVKLTDSVLEKCETKEKLRQ 72
>At5g07790.1 68418.m00892 expressed protein
Length = 616
Score = 27.9 bits (59), Expect = 4.8
Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 20 ECANIAQEINEGSQ-TDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDV 78
E +++ +E++E ++++ Q+ SL+ + +L D+ E E + V Q V
Sbjct: 162 EYSDMLEEVHEAQNFLEEQSLQRMSLDSGKQSSKLQLDLNEPAKIEEHSDYVFNQFLSSV 221
Query: 79 ---QCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKE-VID-RISPECSDEDVQELKKFL 133
+ E E E + + +++++ S ++ VID +SP S+E++ +KKF
Sbjct: 222 ISNEIGEESDTKNEGESLVKGSNGINEAQGSVKCREDYVIDLNMSPPSSEEELTIVKKFE 281
Query: 134 EGKPK 138
KP+
Sbjct: 282 TEKPQ 286
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 24 IAQEINEGSQTDKETGQKRSLE--LMRLVYELPEDIKEIMHTENPTI 68
IA+ N + + E G+++S+E L+ +L EDI + + NP I
Sbjct: 26 IAELANSTGEPNPEEGEEQSVEDELIAKAQKLMEDITSVANNPNPNI 72
>At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB5A GI:1370178 from
[Lotus japonicus]
Length = 200
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 37 ETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCD 77
ET K + + + YE+ + + TENPT V ++ D
Sbjct: 151 ETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMD 191
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 27.9 bits (59), Expect = 4.8
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 64 ENPTIEVTEQKSCDVQCEEYYGLSPE-SERKLYEAQSVHKSEQSSDQNKEVIDR---ISP 119
E P + K + EE SP S +K E++ HK +SSD+++E++D P
Sbjct: 48 EKPEKSKKKSKKYEEVEEEEKSPSPSPSPKKSKESKKKHK--RSSDESEEIVDSKPVTVP 105
Query: 120 ECSDEDVQELKKFLEGKPKLLERYLKE 146
+ E + + E LLE Y KE
Sbjct: 106 IVTIESDSDFEFDKEDIKNLLESYSKE 132
>At1g79460.1 68414.m09261 ent-kaurene synthase / ent-kaurene
synthetase B (KS) (GA2) identical to GI:3056725
[PMID:9536043]; formerly called ent-kaurene synthetase B
Length = 785
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 85 GLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKF-LEGKPKLLERY 143
G ES A S+H + +++KEVI ++ +EL K LE K ++ R
Sbjct: 679 GFKRESAEGKLNAVSLHMKHERDNRSKEVIIESMKGLAERKREELHKLVLEEKGSVVPRE 738
Query: 144 LKE 146
KE
Sbjct: 739 CKE 741
>At1g65020.1 68414.m07369 expressed protein
Length = 319
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 78 VQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPEC--SDEDVQELKKF 132
+Q +GL+P + LY + S ++KEV R S E D ++KKF
Sbjct: 251 IQKTSMFGLAPSRLQVLYSYRDYRSEGSSGAESKEVTVRSSTEVLFQPRDSTKMKKF 307
>At1g20380.1 68414.m02542 prolyl oligopeptidase, putative / prolyl
endopeptidase, putative / post-proline cleaving enzyme,
putative similar to SP|P48147 Prolyl endopeptidase (EC
3.4.21.26) (Post-proline cleaving enzyme) {Homo
sapiens}; contains Pfam profiles PF00326: prolyl
oligopeptidase family, PF02897: Prolyl oligopeptidase,
N-terminal beta-propeller domain
Length = 731
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 123 DEDVQELKKFLEGKPKLLERYLKECASADEVN 154
D D +E+K+F+E + +L + LK C + ++++
Sbjct: 40 DPDAEEVKEFVEKQVQLSDSVLKSCETKEKLH 71
>At4g32820.1 68417.m04668 expressed protein ; expression supported
by MPSS
Length = 1817
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 34 TDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERK 93
++++ G + + + ++PE +E+ E +E+ + D YGL+ +
Sbjct: 880 SEEQVGYREKEQSEQQSKQIPEHTEEVAEEEKDELELLINNALDQCFFCLYGLNLRVDGS 939
Query: 94 LYEAQSVHKSEQSSD-QNKE 112
+ +VHK+ D Q KE
Sbjct: 940 YEDELAVHKNTSRGDYQTKE 959
>At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PSP)
family protein similar to SP|Q13435 Splicing factor 3B
subunit 2 (Spliceosome associated protein 145) (SAP 145)
(SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa
subunit) {Homo sapiens}; contains Pfam profiles PF04046:
PSP, PF04037: Domain of unknown function (DUF382)
Length = 584
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 102 KSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLER-----YLKECASADEVNRI 156
+SE+ D K+V + ++D Q +K + K K L+R LK+ ++ +V +
Sbjct: 121 ESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKKKLQRRMKIAELKQVSARPDVVEV 180
Query: 157 HSVTSSAP 164
TS+ P
Sbjct: 181 WDATSADP 188
>At3g56860.3 68416.m06325 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 27.5 bits (58), Expect = 6.3
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 52 ELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQN- 110
E + +K+ E + + DV+ EY + E E ++ + +++ DQ
Sbjct: 17 EPSQKLKQTPEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVEDDDDEDDGDENEDQTD 76
Query: 111 ----KEVIDRISPECSDEDVQELKKFLE--GKPKLLERYLKECAS--ADEVNRIHSVTSS 162
+ S D+D + ++ LE K ++L LKE A D NRI V
Sbjct: 77 GNRIEAAATSGSGNQEDDDDEPIQDLLEPFSKEQVLS-LLKEAAEKHVDVANRIREVADE 135
Query: 163 APL 165
P+
Sbjct: 136 DPV 138
>At3g56860.2 68416.m06324 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 27.5 bits (58), Expect = 6.3
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 52 ELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQN- 110
E + +K+ E + + DV+ EY + E E ++ + +++ DQ
Sbjct: 17 EPSQKLKQTPEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVEDDDDEDDGDENEDQTD 76
Query: 111 ----KEVIDRISPECSDEDVQELKKFLE--GKPKLLERYLKECAS--ADEVNRIHSVTSS 162
+ S D+D + ++ LE K ++L LKE A D NRI V
Sbjct: 77 GNRIEAAATSGSGNQEDDDDEPIQDLLEPFSKEQVLS-LLKEAAEKHVDVANRIREVADE 135
Query: 163 APL 165
P+
Sbjct: 136 DPV 138
>At3g56860.1 68416.m06323 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 27.5 bits (58), Expect = 6.3
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 52 ELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQN- 110
E + +K+ E + + DV+ EY + E E ++ + +++ DQ
Sbjct: 17 EPSQKLKQTPEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVEDDDDEDDGDENEDQTD 76
Query: 111 ----KEVIDRISPECSDEDVQELKKFLE--GKPKLLERYLKECAS--ADEVNRIHSVTSS 162
+ S D+D + ++ LE K ++L LKE A D NRI V
Sbjct: 77 GNRIEAAATSGSGNQEDDDDEPIQDLLEPFSKEQVLS-LLKEAAEKHVDVANRIREVADE 135
Query: 163 APL 165
P+
Sbjct: 136 DPV 138
>At3g24520.1 68416.m03079 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 330
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 45 ELMRLVYELPEDIKEI---MHTENPTIEVTEQKSCDVQCEEYYGLSPES--ERKLYEAQS 99
E++R + L E+ +E+ + N IE TE++ + Y + R + E +
Sbjct: 122 EIVREIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVEDPDLLPRMMLEKER 181
Query: 100 VHKSEQSSDQNKEVIDRISPECSDEDVQE 128
+ +Q SD+ K + + + +E+V+E
Sbjct: 182 TKQQQQVSDKKKRRVTMSTVKSEEEEVEE 210
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 27.5 bits (58), Expect = 6.3
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 43 SLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHK 102
S+ L LVY +D E P + E+ V+ E+ + L PE+E+ + V++
Sbjct: 353 SVSLAGLVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEK--VKVLDVNE 410
Query: 103 SEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKP 137
E + + + +++ + SD V+EL ++L +P
Sbjct: 411 DE---EVDIDTVEKDAFSDSDMSVEEL-RYLPAEP 441
>At2g40060.1 68415.m04922 expressed protein
Length = 258
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 11/95 (11%)
Query: 37 ETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYE 96
E +KR EL++ + E + KE H K +V CE + E E+ E
Sbjct: 103 EEKEKREKELLKQIIEEADQYKEEFH-----------KKIEVTCENNKAANREKEKLYLE 151
Query: 97 AQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKK 131
Q +E S + K + + + E + + KK
Sbjct: 152 NQEKFYAESSKNYWKAIAELVPKEVPTIEKRRGKK 186
>At1g47550.1 68414.m05278 expressed protein
Length = 887
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 90 SERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLE---GKPKLLERYLKE 146
++R + + V +S SD V + + +ED++ L G+ + LK
Sbjct: 174 TQRSTEDGEPVAESVTESDLKVTVEKELVSQAEEEDMEALLGTYVMGIGEAEAFSERLKR 233
Query: 147 CASADEVNRIHSVTSSAPLSPRPHHEARSTSVTSDLFQLWLSSSPVKL 194
A E +H++ S PL + + + D WL +KL
Sbjct: 234 ELQALEAANVHAILESEPLVDEVLNGLEAATNIVDDMDEWLGIFNIKL 281
>At5g46840.1 68418.m05771 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 501
Score = 27.1 bits (57), Expect = 8.4
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 26 QEINEGSQTDKETGQKRSLELMRLVYE--LPEDIKEIMHTENPTIEVTEQKSCDVQCEEY 83
QEI E S D++ G KR+ E E LP K+ + T E+++ EE
Sbjct: 51 QEIKESSIPDEKKGDKRNAENEEEEEETDLPVKTKKSKKEKKLTDSGDEKETISEAVEES 110
Query: 84 YGLSPESERKLYEAQSVHKSEQSSD---QNKEVIDRISPECSDEDVQELKKFLEGKPKLL 140
+S +RK E ++ +++++ + K+V ++ D K+ + + KLL
Sbjct: 111 GLVSKRKKRKRDEIENEYETKKYGSVEMKEKKVGEKRKKADEVADTMVSKEGFDDESKLL 170
>At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 477
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 86 LSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPE 120
LS E ERK+Y++ V QS +++KE+I ++ E
Sbjct: 276 LSAE-ERKIYKSCKVFARFQSKEEHKELIKKVIEE 309
>At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 548
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 86 LSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPE 120
LS E ERK+Y++ V QS +++KE+I ++ E
Sbjct: 347 LSAE-ERKIYKSCKVFARFQSKEEHKELIKKVIEE 380
>At2g40140.1 68415.m04937 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar) and Pfam domain,
PF00023: Ankyrin repeat
Length = 597
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 151 DEVNRIHSVTSSAPLSPRPHHEARSTSVTSDLFQLWLSSSPV 192
DE+ +++ T SA +SPR +++ SV S L L SSP+
Sbjct: 313 DELRPVNASTGSAMVSPRSSNQSPEMSVMS---PLTLGSSPM 351
>At2g38823.1 68415.m04770 expressed protein
Length = 258
Score = 27.1 bits (57), Expect = 8.4
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 73 QKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKF 132
Q+ Q +Y+G E E + K SD+ K D + C+ L+K
Sbjct: 111 QQKAQFQELDYHGKC-EFREFSRELDCIRKKMPRSDRRKAAHDLLKDVCNPTSHDSLRKS 169
Query: 133 LEGKPKLLERYLKE 146
+E + K L++ ++E
Sbjct: 170 VELEIKALKKLIRE 183
>At2g10350.1 68415.m01087 Ulp1 protease family protein similar to
At5g28170, At1g35110, At1g44880, At3g42530, At4g19320,
At5g36020, At4g03970, At3g43010 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1110
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 73 QKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKF 132
Q+SC +C + +GL P ++L ++K+ +S D + + + SD + + K
Sbjct: 1022 QRSCKPECSQNHGLQPFYWKRL---DGLYKNLRSGDCGPVAMKFLEIQASDNPPENMAKI 1078
Query: 133 LE 134
+
Sbjct: 1079 TD 1080
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 27.1 bits (57), Expect = 8.4
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 12/141 (8%)
Query: 40 QKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQS 99
Q+RS LMR+ E + EI H +N IE E++ ++ E + R + S
Sbjct: 197 QERSNMLMRISEEKSQAESEIEHLKN-NIESCEREINTLKYETHVITKELEIRNEEKNMS 255
Query: 100 VHKSEQSSDQNKEVIDRISP-ECSDEDVQEL-KKFLEGKPKLLERYLKECAS-------A 150
+ +E ++ Q+ E + +I+ E + ++ L +K L G P L + E S
Sbjct: 256 MRSAEAANKQHLEGVKKIAKLEAECQRLRTLVRKKLPG-PAALAQMKMEVESLGFGDHRQ 314
Query: 151 DEVNRIHSVTSSAPL-SPRPH 170
D R V S+PL SP H
Sbjct: 315 DHRQRRSPVRPSSPLMSPMSH 335
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.307 0.124 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,419,789
Number of Sequences: 28952
Number of extensions: 185311
Number of successful extensions: 675
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 657
Number of HSP's gapped (non-prelim): 56
length of query: 195
length of database: 12,070,560
effective HSP length: 77
effective length of query: 118
effective length of database: 9,841,256
effective search space: 1161268208
effective search space used: 1161268208
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 57 (27.1 bits)
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