Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000059-TA|BGIBMGA000059-PA|undefined
(195 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 36 0.004
SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.26
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.34
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 29 0.45
SPCC16C4.20c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 29 0.60
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 28 1.0
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 28 1.0
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 28 1.0
SPCC70.03c |||proline dehydrogenase|Schizosaccharomyces pombe|ch... 27 2.4
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 27 2.4
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 26 3.2
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 26 4.2
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 26 4.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 4.2
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 5.6
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 5.6
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 25 5.6
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 25 5.6
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 25 7.4
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 25 7.4
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 25 9.7
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 9.7
SPAC19G12.04 |||ureidoglycolate hydrolase |Schizosaccharomyces p... 25 9.7
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 9.7
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 25 9.7
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 25 9.7
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 25 9.7
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 35.9 bits (79), Expect = 0.004
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 20 ECANIAQEINEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDV- 78
E + E+ + + Q++S+EL RL +L +DI+E EN + + +Q DV
Sbjct: 479 EAESSKNELWDSMMVSRMKTQEQSIELTRLYKQL-QDIEE--DYENKLMRMEQQWREDVD 535
Query: 79 QCEEYYGLSPESERKLYEAQSV-HKSEQSSDQNKEVIDRISPEC-------------SDE 124
Q +EY E ++L + + V KS + SD +EV+ ++ E ++E
Sbjct: 536 QLQEYV---EEITQELQDTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEE 592
Query: 125 DV----QELKKFLEGKPKLLERYLKECASADEVNR 155
+ +E++K + +L ERY +C DE+ +
Sbjct: 593 SISLFKEEVEKLTDEITQLSERYNDKCHEFDELQK 627
>SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 29.9 bits (64), Expect = 0.26
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 35 DKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLS--PESER 92
D+E G+KR++ +M Y E ++M +N E Q ++Q E Y G E
Sbjct: 77 DRE-GRKRNIAMMTDNYISLETGDQLMLAQNHKEEKLLQTEDEIQDEGYSGFENYVEESE 135
Query: 93 KLYEAQSVHKSEQSSDQNKEV-IDR--ISPECSDEDVQE 128
KL E H SE ++ ++ +D+ + E DED+ E
Sbjct: 136 KLQEIYH-HSSESLRTRSIQMAVDQKNMEMELDDEDIAE 173
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.5 bits (63), Expect = 0.34
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 26 QEINEGSQTDKETGQKRSLELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYG 85
+E E S + + E + E ++ +E+ + E + S EE
Sbjct: 131 EEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEV 190
Query: 86 LSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSD-EDVQELKKFLEGKPKLLERYL 144
+ E+K ++S SE SSD + E D S S+ E E +K + +P ER
Sbjct: 191 VEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEERPA 250
Query: 145 KECASADEVNRIHSV 159
K + + N +V
Sbjct: 251 KITKPSQDSNETCTV 265
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 29.1 bits (62), Expect = 0.45
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 110 NKEVIDRISPECSDEDV--QELKKFLEGKPKLLERYLKECASADEVNRIHSVTSSAPLSP 167
NK+ + S E D V ++ KK LE + ER+L E A + E ++ SS+ +
Sbjct: 217 NKDAVSNESDEDGDFLVKKEKTKKQLEEEEHGYERFLLESAQSKEARKVLEDLSSSYVKQ 276
Query: 168 RP 169
RP
Sbjct: 277 RP 278
>SPCC16C4.20c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 77
Score = 28.7 bits (61), Expect = 0.60
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 45 ELMRLVYELPEDIKEIMHTENPTIEVTE-QKSCDVQCEEYYGLSPESERKLYEAQSVHKS 103
+++ L+ E ED+ T +V+E +K C++ + Y + + +R +EAQ + K
Sbjct: 4 QVVNLLQETEEDVYR-RKTARIRRKVSEIEKECEMYAVKIYNVERDIQRYRHEAQLLSKV 62
Query: 104 EQSSDQNKE 112
+ NKE
Sbjct: 63 LEKKGLNKE 71
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.9 bits (59), Expect = 1.0
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 87 SPESERKLYE---AQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLERY 143
SPES RK YE A Q DQ K+ R + + K ++ KLLE
Sbjct: 447 SPESCRKQYEKTIASYSSNQRQEEDQGKKRKKRKKKKSKGKR----KFYVADSLKLLEHV 502
Query: 144 LKECASADEVNRI 156
++C A +N I
Sbjct: 503 QRQCGEAISINAI 515
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 130 KKFLEGKPKLLERYLKECASADEVNRIHSVTSSAPL 165
+ + +P LL Y C+S D ++ + +TS PL
Sbjct: 258 RDYFSRRPTLLNTYGNRCSSTDTLSSLSRLTSQDPL 293
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 27.9 bits (59), Expect = 1.0
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 49 LVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSE-QSS 107
L+ +PEDI E+ +Q+ Q E S L+E ++ ++E Q
Sbjct: 182 LLTGIPEDILNRQREESAAALAAQQQ----QSEALAPTSTGQPANLFEQAALSENENQEQ 237
Query: 108 DQNKEVIDRISPECSDEDVQELKKFLEGKPKLLERYLKECASAD 151
N D + S Q+L++ ++ P++LE L++ D
Sbjct: 238 PSNTVGDDPLGFLRSIPQFQQLRQIVQQNPQMLETILQQIGQGD 281
>SPCC70.03c |||proline dehydrogenase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 492
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 118 SPECSDEDVQELKKFLEGKPKLLERYLKE 146
SPE S +V ELKKF E KL + + KE
Sbjct: 232 SPELSTYEVSELKKFWEYADKLCQ-FAKE 259
>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 588
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 120 ECSDEDVQELKKFLEGKPKLLERYLKE 146
+CS+ED LK+FL G +++R+LKE
Sbjct: 479 KCSEEDEAGLKEFLLG---VIDRHLKE 502
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 81 EEYYGLSPESERKLYEAQSVHKSEQSSDQ 109
E YY L+PE E A S++++ Q+S Q
Sbjct: 273 ERYYDLTPEDEMTNLCANSIYQNLQTSAQ 301
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 4.2
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 103 SEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKLLE 141
SEQ D NK+ I S+E V LK LE K K +E
Sbjct: 229 SEQLLDYNKQSIQLGLRPLSEEVVTTLKNLLEVKDKDVE 267
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 54 PEDIKEIM-HTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKE 112
P I+E +T P + + +++ EY+ E ERK + + E+ ++ KE
Sbjct: 250 PAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKE 309
Query: 113 VIDRISP 119
+ P
Sbjct: 310 RMKAFIP 316
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 4.2
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 45 ELMRLVYELPEDIKEIMHTENPTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSE 104
EL+++V ++ K ++ ++ ++ +S + +E S + E+KLYEA++ E
Sbjct: 134 ELLKIVKDVD---KLLLKRDHKQLDYDRHRSSFKKLQEKKDKSLKDEKKLYEAETAF--E 188
Query: 105 QSSDQ 109
QSS +
Sbjct: 189 QSSQE 193
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 5.6
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 102 KSEQSSDQNKEVIDRISPECSDEDVQELKKF--LEGKPKLLERYLKE--CASADEVNRIH 157
KSE ++ +N+ V+ SP S + KP K +S N +
Sbjct: 166 KSEFAAVKNEYVLSPTSPTTSAAFPSSFSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSN 225
Query: 158 SVTSSAPLSPR-PHHEARSTSVTSDL 182
+ TSSAP++PR P S S TS +
Sbjct: 226 ASTSSAPINPRAPQTRRESISSTSSI 251
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.4 bits (53), Expect = 5.6
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 20 ECANIAQEINEGSQTDKETGQK-RSLEL-MRLVYELPEDIKEIMHTENPTIEVTEQKSCD 77
+C+N+ ++IN G++ KE +K SLE + + + + + T + + S D
Sbjct: 863 KCSNLQEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSND 922
Query: 78 VQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEV----IDRISPECSDEDVQELK--- 130
Q +E ++ E +++ +A + +E+ + +++E+ +D I + + ++Q LK
Sbjct: 923 DQNKE-KSVNNEKFKEVSQALA-EANEKLNARDEEIERLKVDIIGLQNASLNMQSLKDSD 980
Query: 131 ----KFLEGKPKLLERYLKE 146
LE K K LE+ LKE
Sbjct: 981 NRTISDLESKNKELEKKLKE 1000
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 25.4 bits (53), Expect = 5.6
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
Query: 77 DVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGK 136
++ EEY E ++ LY SV +SS D+ C LE +
Sbjct: 93 EINLEEYVSQIKEVKQSLYSDDSVFNESKSSSPPDAHTDKYFTPCGSPTKLIHSTLLEER 152
Query: 137 --PKLLER---YLKECASADEVNRIHSVTSSAPL 165
P LE YL+E A EV R +++ PL
Sbjct: 153 DTPSSLEHVSFYLQESA-VSEV-RFDKPSNNGPL 184
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 79 QCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEV 113
+ YY + + E+K+ + QS + E++ D + +V
Sbjct: 82 EARPYYLVKLQQEKKIADLQSTNNDEKNEDHSSKV 116
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.0 bits (52), Expect = 7.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 122 SDEDVQELKKFLEGKPKLLERYLKECASADEVNRIHSVTSSAPLSPRPHHEARSTS 177
S ED+ ++ L G P L R K+ ++ +H + SAP+S P H +S S
Sbjct: 122 SKEDMYR-RRSLHGLPSLSRRNSKKSSTLSRSISLHLRSESAPIS-LPIHLYKSYS 175
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 22 ANIAQEINEGSQTDKETGQKRSLELMRLVYELPEDIKEI 60
AN+ Q+ S++DK++ ++R E R + E +I+ +
Sbjct: 1124 ANLKQKKTHSSKSDKKSSRRRKNEKRRKLNEQNPNIRNV 1162
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 81 EEYYGL-SPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQELKKFLEGKPKL 139
EE+Y + ES YE + ++ +D + D DED + +
Sbjct: 671 EEFYASETSESSEGEYETSTSESEDEETDDTSQEEDNEKNSTPDEDTENNNTSSISTKSI 730
Query: 140 LERYLKE 146
++R L E
Sbjct: 731 MDRPLTE 737
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 24.6 bits (51), Expect = 9.7
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 70 VTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDVQEL 129
V E+ + + +E Y LSP +E L E S ++ S++ E D + E + D
Sbjct: 123 VDEEDEEEEESDEDYDLSP-TEEDLVETVS---GDEESEEESESEDNSASEEDELDSAPA 178
Query: 130 KKFLEGKPKLLERYLKECASADEVN 154
KK K + + +E A++ + N
Sbjct: 179 KKAQVKKKRTKDESEQEEAASPKKN 203
>SPAC19G12.04 |||ureidoglycolate hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 191
Score = 24.6 bits (51), Expect = 9.7
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 66 PTIEVTEQKSCDVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECS--- 122
P V +QK DV+ G + + K+ E+ ++ S+ K V + S S
Sbjct: 18 PFGSVVQQKD-DVKMVSANGGTAKKYLKVSESIQNYEKSSSASTRKGVWNFFSTHPSVHP 76
Query: 123 --DEDVQELKKFLEGKPKLLERYLKECASADEVNRIHSVTSSAP 164
DE LE P + ++ C S+DE + +V +AP
Sbjct: 77 ANDEHAAFQISVLERHPFTTQTFIPMCRSSDEQAYLIAVAPNAP 120
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 79 QCEEYYGL---SPESERKLYEAQSVHKSEQSSDQNKEV 113
+ +++YG+ + + R +Y + S H S S+D V
Sbjct: 1457 ELDQFYGIVNHASDDRRSIYSSASTHASNASADDASNV 1494
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 123 DEDVQELKKFLEGKPKLLERYLKECASA 150
DE V + + L P LL++Y + C S+
Sbjct: 595 DEVVNQQQAMLRNLPLLLQKYRESCVSS 622
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 32 SQTDKETGQKRSLELMRLVYELPEDIKE 59
S+ D+E+ EL+ L Y++ ED KE
Sbjct: 297 SEEDEESESPELDELLELDYQIGEDFKE 324
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 24.6 bits (51), Expect = 9.7
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 77 DVQCEEYYGLSPESERKLYEAQSVHKSEQSSDQNKEVIDRISPECSDEDV--QELKKFLE 134
DV ++ LS E + E+ S KE++DR++ S + +LKK E
Sbjct: 545 DVDSDDNIELSDSDEEEEKATARKESDEKGSSSQKELVDRMTELASQSILTPNDLKKLEE 604
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.124 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,349
Number of Sequences: 5004
Number of extensions: 35797
Number of successful extensions: 151
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 137
Number of HSP's gapped (non-prelim): 29
length of query: 195
length of database: 2,362,478
effective HSP length: 69
effective length of query: 126
effective length of database: 2,017,202
effective search space: 254167452
effective search space used: 254167452
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -