Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000058-TA|BGIBMGA000058-PA|undefined
         (305 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   7.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 253 MLPLVLSWASTVHKKQGSTV 272
           M+PL + WA TV  K G  +
Sbjct: 91  MMPLEIGWAITVSWKAGDVM 110


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 120 IVVVTECLENLNITREFTISREKFYSALRWLTR 152
           I++    +  L   +E T+ REK Y AL    R
Sbjct: 339 IILFNPEVRGLKSIQEVTLLREKIYGALEGYCR 371


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 120 IVVVTECLENLNITREFTISREKFYSALRWLTR 152
           I++    +  L   +E T+ REK Y AL    R
Sbjct: 339 IILFNPEVRGLKSIQEVTLLREKIYGALEGYCR 371


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 29 LLCSRCQTHVTSNKTIAPSKAYWN 52
          LL    Q+   +NKT+     YWN
Sbjct: 25 LLLGFVQSTPDNNKTVREFNVYWN 48


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,965
Number of Sequences: 429
Number of extensions: 3650
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 4
length of query: 305
length of database: 140,377
effective HSP length: 57
effective length of query: 248
effective length of database: 115,924
effective search space: 28749152
effective search space used: 28749152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)