GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000058-TA|BGIBMGA000058-PA|undefined
         (305 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 165 NVQISEQDLIRLSVPDIPENGEPERIEIPNVFISIND-VARIIRASWHQGDHSVFTSGFA 223
           NV++ +++  +        N + E        I+  D V   I   +H G H+ FT    
Sbjct: 446 NVEVVQEEAKKEESDSNNNNNKEEGNSCQYCNIAFGDAVLYTIHMGYH-GFHNPFTCNMC 504

Query: 224 GVQCN 228
           GV+C+
Sbjct: 505 GVECS 509


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 253 MLPLVLSWASTVHKKQGSTVDHAVVY 278
           M+PL + WASTV    G  +   +++
Sbjct: 106 MMPLEIGWASTVSWYAGDAMCRIMMF 131


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 253 MLPLVLSWASTVHKKQGSTVDHAVVY 278
           M+PL + WASTV    G  +   +++
Sbjct: 106 MMPLEIGWASTVSWYAGDAMCRIMMF 131


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 12  NAVLGYLPAELSSKTTLLLCSRCQTHVTSNKTIAPSKAY 50
           N++ G+L   L + TTL L    Q  V   K    + AY
Sbjct: 209 NSLFGFLVLLLVALTTLQLLIYIQVIVIGTKNTIETVAY 247


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,198
Number of Sequences: 317
Number of extensions: 2805
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 305
length of database: 114,650
effective HSP length: 57
effective length of query: 248
effective length of database: 96,581
effective search space: 23952088
effective search space used: 23952088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)