Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000058-TA|BGIBMGA000058-PA|undefined
(305 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ437529-1|ABD92708.1| 641|Homo sapiens DNA helicase PIF1 protein. 62 2e-09
AY498716-1|AAS77398.1| 641|Homo sapiens PIF1/RRM3 DNA helicase-... 62 2e-09
AF108138-1|AAD44047.1| 374|Homo sapiens DNA helicase homolog pr... 62 2e-09
AB185927-1|BAE47455.1| 707|Homo sapiens PIF1 DNA helicase isofo... 62 2e-09
AB185926-1|BAE47454.1| 641|Homo sapiens PIF1 DNA helicase isofo... 62 2e-09
AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protei... 35 0.41
AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protei... 35 0.41
AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein. 35 0.41
AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein. 35 0.41
AB011104-1|BAA25458.1| 1637|Homo sapiens KIAA0532 protein protein. 35 0.41
Z81144-1|CAI41969.1| 686|Homo sapiens interleukin 1 receptor ac... 32 2.9
Z74619-1|CAI41989.1| 686|Homo sapiens interleukin 1 receptor ac... 32 2.9
Z74477-1|CAI41995.1| 686|Homo sapiens interleukin 1 receptor ac... 32 2.9
Z69721-1|CAI41981.1| 686|Homo sapiens interleukin 1 receptor ac... 32 2.9
Z68908-1|CAI41987.1| 686|Homo sapiens interleukin 1 receptor ac... 32 2.9
Z68330-1|CAI42006.1| 686|Homo sapiens interleukin 1 receptor ac... 32 2.9
Z68328-1|CAI42001.1| 686|Homo sapiens interleukin 1 receptor ac... 32 2.9
BC104786-1|AAI04787.1| 686|Homo sapiens interleukin 1 receptor ... 32 2.9
BC104784-1|AAI04785.1| 686|Homo sapiens interleukin 1 receptor ... 32 2.9
AL050401-1|CAI42894.1| 686|Homo sapiens interleukin 1 receptor ... 32 2.9
AJ290436-1|CAB89867.1| 686|Homo sapiens IL1RAPL-2 related prote... 32 2.9
AJ272208-1|CAB86868.1| 686|Homo sapiens IL-1 receptor accessory... 32 2.9
AF284436-1|AAG21370.1| 686|Homo sapiens TIGIRR-1 protein. 32 2.9
AF212016-1|AAF61307.1| 686|Homo sapiens interleukin-1 receptor ... 32 2.9
AF181285-1|AAF59412.1| 658|Homo sapiens X-linked interleukin-1 ... 32 2.9
AL132655-8|CAM28316.1| 625|Homo sapiens GNAS complex locus prot... 30 8.8
>DQ437529-1|ABD92708.1| 641|Homo sapiens DNA helicase PIF1 protein.
Length = 641
Score = 62.5 bits (145), Expect = 2e-09
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ LPL L+WA ++HK QG T+D + LG ++F GQAYVALSR +SL+GL
Sbjct: 541 RQQLPLQLAWAMSIHKSQGMTLDCVEISLG-RVFASGQAYVALSRARSLQGL 591
>AY498716-1|AAS77398.1| 641|Homo sapiens PIF1/RRM3 DNA
helicase-like protein protein.
Length = 641
Score = 62.5 bits (145), Expect = 2e-09
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ LPL L+WA ++HK QG T+D + LG ++F GQAYVALSR +SL+GL
Sbjct: 541 RQQLPLQLAWAMSIHKSQGMTLDCVEISLG-RVFASGQAYVALSRARSLQGL 591
>AF108138-1|AAD44047.1| 374|Homo sapiens DNA helicase homolog
protein.
Length = 374
Score = 62.5 bits (145), Expect = 2e-09
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ LPL L+WA ++HK QG T+D + LG ++F GQAYVALSR +SL+GL
Sbjct: 274 RQQLPLQLAWAMSIHKSQGMTLDCVEISLG-RVFASGQAYVALSRARSLQGL 324
>AB185927-1|BAE47455.1| 707|Homo sapiens PIF1 DNA helicase isoform
beta protein.
Length = 707
Score = 62.5 bits (145), Expect = 2e-09
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ LPL L+WA ++HK QG T+D + LG ++F GQAYVALSR +SL+GL
Sbjct: 541 RQQLPLQLAWAMSIHKSQGMTLDCVEISLG-RVFASGQAYVALSRARSLQGL 591
>AB185926-1|BAE47454.1| 641|Homo sapiens PIF1 DNA helicase isoform
alpha protein.
Length = 641
Score = 62.5 bits (145), Expect = 2e-09
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ LPL L+WA ++HK QG T+D + LG ++F GQAYVALSR +SL+GL
Sbjct: 541 RQQLPLQLAWAMSIHKSQGMTLDCVEISLG-RVFASGQAYVALSRARSLQGL 591
>AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protein
splice variant 1 protein.
Length = 3997
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 51 WNNLDPGSIPDEIQALTQAEQRLL-CRIIPLVKIVKFTGLYGQ 92
WNN GS+ EIQ L QA+ +LL CR + + +VK ++GQ
Sbjct: 2512 WNN---GSVCQEIQFLAQADCKLLECRNVTMQSVVKPFSIFGQ 2551
>AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protein
protein.
Length = 4022
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 51 WNNLDPGSIPDEIQALTQAEQRLL-CRIIPLVKIVKFTGLYGQ 92
WNN GS+ EIQ L QA+ +LL CR + + +VK ++GQ
Sbjct: 2537 WNN---GSVCQEIQFLAQADCKLLECRNVTMQSVVKPFSIFGQ 2576
>AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein.
Length = 3997
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 51 WNNLDPGSIPDEIQALTQAEQRLL-CRIIPLVKIVKFTGLYGQ 92
WNN GS+ EIQ L QA+ +LL CR + + +VK ++GQ
Sbjct: 2512 WNN---GSVCQEIQFLAQADCKLLECRNVTMQSVVKPFSIFGQ 2551
>AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein.
Length = 4022
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 51 WNNLDPGSIPDEIQALTQAEQRLL-CRIIPLVKIVKFTGLYGQ 92
WNN GS+ EIQ L QA+ +LL CR + + +VK ++GQ
Sbjct: 2537 WNN---GSVCQEIQFLAQADCKLLECRNVTMQSVVKPFSIFGQ 2576
>AB011104-1|BAA25458.1| 1637|Homo sapiens KIAA0532 protein protein.
Length = 1637
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 51 WNNLDPGSIPDEIQALTQAEQRLL-CRIIPLVKIVKFTGLYGQ 92
WNN GS+ EIQ L QA+ +LL CR + + +VK ++GQ
Sbjct: 152 WNN---GSVCQEIQFLAQADCKLLECRNVTMQSVVKPFSIFGQ 191
>Z81144-1|CAI41969.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>Z74619-1|CAI41989.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>Z74477-1|CAI41995.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>Z69721-1|CAI41981.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>Z68908-1|CAI41987.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>Z68330-1|CAI42006.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>Z68328-1|CAI42001.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>BC104786-1|AAI04787.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>BC104784-1|AAI04785.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>AL050401-1|CAI42894.1| 686|Homo sapiens interleukin 1 receptor
accessory protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>AJ290436-1|CAB89867.1| 686|Homo sapiens IL1RAPL-2 related protein
protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>AJ272208-1|CAB86868.1| 686|Homo sapiens IL-1 receptor accessory
protein-like 2 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>AF284436-1|AAG21370.1| 686|Homo sapiens TIGIRR-1 protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>AF212016-1|AAF61307.1| 686|Homo sapiens interleukin-1 receptor 9
protein.
Length = 686
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 482 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 536
>AF181285-1|AAF59412.1| 658|Homo sapiens X-linked interleukin-1
receptor accessory protein-like 2 protein.
Length = 658
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 96 RGQDIFEVSERLPNMLPRSSSQVGIVVVTECLENLNITREFTISRE-KFYSALRW 149
RG IFE+ RL NML +V ++ TE +N ++ R K S ++W
Sbjct: 454 RGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKW 508
>AL132655-8|CAM28316.1| 625|Homo sapiens GNAS complex locus
protein.
Length = 625
Score = 30.3 bits (65), Expect = 8.8
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 32 SRCQTHVTSNKTIAPSKAYWNNLDPGSIPDEIQALTQAEQRLLCRIIPLVKIVKFTGLYG 91
S + V S + + PS + + +P +PD+ T Q+ LC + L + + +
Sbjct: 56 SSLDSPVGSMQALRPSAQHSWSPEPSVVPDQAWEDTALHQKKLCP-LSLTSLPREAAV-- 112
Query: 92 QYGFRGQDIFEVSERL---PNMLPRSSSQVGI 120
+ +R Q + + ++ L P +LPRS G+
Sbjct: 113 NFSYRSQTLLQEAQVLQGSPELLPRSPKPSGL 144
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,032,440
Number of Sequences: 224733
Number of extensions: 1872184
Number of successful extensions: 3333
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3323
Number of HSP's gapped (non-prelim): 26
length of query: 305
length of database: 73,234,838
effective HSP length: 90
effective length of query: 215
effective length of database: 53,008,868
effective search space: 11396906620
effective search space used: 11396906620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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