Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000058-TA|BGIBMGA000058-PA|undefined
(305 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-9|AAK21508.2| 677|Caenorhabditis elegans Pif1p dna hel... 59 3e-09
AB015041-1|BAA28677.1| 677|Caenorhabditis elegans PIF1 protein. 59 3e-09
AF040649-5|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 47 2e-05
Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical pr... 32 0.44
U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase ... 32 0.44
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 31 1.0
AY305844-1|AAR11988.1| 423|Caenorhabditis elegans nuclear recep... 30 1.8
AF273828-1|AAG15177.1| 422|Caenorhabditis elegans nuclear recep... 30 1.8
AF273827-1|AAG15176.1| 421|Caenorhabditis elegans nuclear recep... 30 1.8
AF273826-1|AAG15175.1| 419|Caenorhabditis elegans nuclear recep... 30 1.8
AC024771-7|AAK70663.4| 407|Caenorhabditis elegans Nuclear hormo... 30 1.8
D49525-2|BAA08471.1| 567|Caenorhabditis elegans TPA-1B protein. 29 4.1
D49525-1|BAA08470.1| 704|Caenorhabditis elegans TPA-1A protein. 29 4.1
D14815-1|BAA03556.1| 557|Caenorhabditis elegans TPA-1 protein. 29 4.1
AF078781-3|AAC26917.1| 567|Caenorhabditis elegans Tpa (tetradec... 29 4.1
AF078781-2|AAC26916.1| 704|Caenorhabditis elegans Tpa (tetradec... 29 4.1
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 29 5.5
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 29 5.5
U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf (diva... 28 9.5
>AC024751-9|AAK21508.2| 677|Caenorhabditis elegans Pif1p dna
helicase (yeast) homologprotein 1 protein.
Length = 677
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
RR LPL L+WA ++HK QG T+D A + L ++F +GQAYVALSR +SL +
Sbjct: 579 RRQLPLQLAWAISIHKSQGMTLDCAEISL-ERVFADGQAYVALSRARSLAAI 629
>AB015041-1|BAA28677.1| 677|Caenorhabditis elegans PIF1 protein.
Length = 677
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
RR LPL L+WA ++HK QG T+D A + L ++F +GQAYVALSR +SL +
Sbjct: 579 RRQLPLQLAWAISIHKSQGMTLDCAEISL-ERVFADGQAYVALSRARSLAAI 629
>AF040649-5|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 222 FAGVQCNGMHAIYPKAIQFPAKFNYGTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLGS 281
FA + G I P+ + K R P+ LS+A +++K QG + +++ +
Sbjct: 1262 FATGERKGHFTIIPRIDCYDDKNISFQLRRTQFPVRLSFALSINKAQGQSFSKIGLWIPT 1321
Query: 282 KLFEEGQAYVALSRVKSLEGL 302
+F GQ YVALSRV++ EGL
Sbjct: 1322 DVFTHGQLYVALSRVRTKEGL 1342
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 222 FAGVQCNGMHAIYPKAIQFPAKFNYGTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLGS 281
FA + G I P+ + K R P+ LS+A +++K QG + +++ +
Sbjct: 1368 FATGERKGHFTIIPRIDCYDDKNISFQLRRTQFPVRLSFALSINKAQGQSFSKIGLWIPT 1427
Query: 282 KLFEEGQAYVALSRVKSLEGL 302
+F GQ YVALSRV++ EGL
Sbjct: 1428 DVFTHGQLYVALSRVRTKEGL 1448
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 222 FAGVQCNGMHAIYPKAIQFPAKFNYGTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLGS 281
FA + G I P+ + K R P+ LS+A +++K QG + +++ +
Sbjct: 1368 FATGERKGHFTIIPRIDCYDDKNISFQLRRTQFPVRLSFALSINKAQGQSFSKIGLWIPT 1427
Query: 282 KLFEEGQAYVALSRVKSLEGL 302
+F GQ YVALSRV++ EGL
Sbjct: 1428 DVFTHGQLYVALSRVRTKEGL 1448
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 222 FAGVQCNGMHAIYPKAIQFPAKFNYGTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLGS 281
FA + G I P+ + K R P+ LS+A +++K QG + +++ +
Sbjct: 1267 FATGERKGHFTIIPRIDCYDDKNISFQLRRTQFPVRLSFALSINKAQGQSFSKIGLWIPT 1326
Query: 282 KLFEEGQAYVALSRVKSLEGL 302
+F GQ YVALSRV++ EGL
Sbjct: 1327 DVFTHGQLYVALSRVRTKEGL 1347
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 222 FAGVQCNGMHAIYPKAIQFPAKFNYGTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLGS 281
FA + G I P+ + K R P+ LS+A +++K QG + +++ +
Sbjct: 1388 FATGERKGHFTIIPRIDCYDDKNISFQLRRTQFPVRLSFALSINKAQGQSFSKIGLWIPT 1447
Query: 282 KLFEEGQAYVALSRVKSLEGL 302
+F GQ YVALSRV++ EGL
Sbjct: 1448 DVFTHGQLYVALSRVRTKEGL 1468
>Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical
protein F11C3.1 protein.
Length = 471
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 255 PLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGLSMY 305
P+ L++AST+H QG + + +Y ++ FE G Y A+SRV+ E ++
Sbjct: 406 PVSLNFASTIHGSQGKSFEKLGLYKLNECFEHGMIYTAISRVRRFEDYKVF 456
>Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 134 REFTISREKFYSA-----LRWLTRNNPLYRDVRIDENVQISEQDLIRLS 177
R+F SR +FY+A L++L RN+ +YRD+++D N+ + + RL+
Sbjct: 472 RKFDESRARFYAAEVTCALQFLHRNDVIYRDLKLD-NILLDAEGHCRLA 519
>Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 134 REFTISREKFYSA-----LRWLTRNNPLYRDVRIDENVQISEQDLIRLS 177
R+F SR +FY+A L++L RN+ +YRD+++D N+ + + RL+
Sbjct: 472 RKFDESRARFYAAEVTCALQFLHRNDVIYRDLKLD-NILLDAEGHCRLA 519
>U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase C
protein.
Length = 707
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 134 REFTISREKFYSA-----LRWLTRNNPLYRDVRIDENVQISEQDLIRLS 177
R+F SR +FY+A L++L RN+ +YRD+++D N+ + + RL+
Sbjct: 472 RKFDESRARFYAAEVTCALQFLHRNDVIYRDLKLD-NILLDAEGHCRLA 519
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 162 IDENVQISEQDLIRLSVPDIPENGEPERIEIPNVFISIND 201
+ E V + D +R + +PE+ PE+IE P + I+D
Sbjct: 167 VHETVPNAVDDFVREAEKQLPESPVPEKIETPEPLVDIHD 206
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 162 IDENVQISEQDLIRLSVPDIPENGEPERIEIPNVFISIND 201
+ E V + D +R + +PE+ PE+IE P + I+D
Sbjct: 2081 VHETVPNAVDDFVREAEKQLPESPVPEKIETPEPLVDIHD 2120
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 162 IDENVQISEQDLIRLSVPDIPENGEPERIEIPNVFISIND 201
+ E V + D +R + +PE+ PE+IE P + I+D
Sbjct: 2081 VHETVPNAVDDFVREAEKQLPESPVPEKIETPEPLVDIHD 2120
>AY305844-1|AAR11988.1| 423|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 423
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 34 CQTHVTSNKTIAPSKAY--WNNLDPG-SIPDEIQALTQAEQRLLCRI 77
C + TSN I PS Y NNL +IPDE Q +T E CR+
Sbjct: 254 CHINDTSNALILPSGDYIDTNNLKSFFNIPDEEQPMTDDEIEKFCRM 300
>AF273828-1|AAG15177.1| 422|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 422
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 34 CQTHVTSNKTIAPSKAY--WNNLDPG-SIPDEIQALTQAEQRLLCRI 77
C + TSN I PS Y NNL +IPDE Q +T E CR+
Sbjct: 253 CHINDTSNALILPSGDYIDTNNLKSFFNIPDEEQPMTDDEIEKFCRM 299
>AF273827-1|AAG15176.1| 421|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 421
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 34 CQTHVTSNKTIAPSKAY--WNNLDPG-SIPDEIQALTQAEQRLLCRI 77
C + TSN I PS Y NNL +IPDE Q +T E CR+
Sbjct: 252 CHINDTSNALILPSGDYIDTNNLKSFFNIPDEEQPMTDDEIEKFCRM 298
>AF273826-1|AAG15175.1| 419|Caenorhabditis elegans nuclear receptor
NHR-86 protein.
Length = 419
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 34 CQTHVTSNKTIAPSKAY--WNNLDPG-SIPDEIQALTQAEQRLLCRI 77
C + TSN I PS Y NNL +IPDE Q +T E CR+
Sbjct: 250 CHINDTSNALILPSGDYIDTNNLKSFFNIPDEEQPMTDDEIEKFCRM 296
>AC024771-7|AAK70663.4| 407|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 86 protein.
Length = 407
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 34 CQTHVTSNKTIAPSKAY--WNNLDPG-SIPDEIQALTQAEQRLLCRI 77
C + TSN I PS Y NNL +IPDE Q +T E CR+
Sbjct: 238 CHINDTSNALILPSGDYIDTNNLKSFFNIPDEEQPMTDDEIEKFCRM 284
>D49525-2|BAA08471.1| 567|Caenorhabditis elegans TPA-1B protein.
Length = 567
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 125 ECLENLNITREFTISREKFYS-----ALRWLTRNNPLYRDVRIDENVQISEQDLIRLS 177
+ + ++ ++F +R +FY+ AL++L NN +YRD+++D NV + I+L+
Sbjct: 323 DLMHHIQQIKKFDEARTRFYACEIVVALQFLHTNNIIYRDLKLD-NVLLDCDGHIKLA 379
>D49525-1|BAA08470.1| 704|Caenorhabditis elegans TPA-1A protein.
Length = 704
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 125 ECLENLNITREFTISREKFYS-----ALRWLTRNNPLYRDVRIDENVQISEQDLIRLS 177
+ + ++ ++F +R +FY+ AL++L NN +YRD+++D NV + I+L+
Sbjct: 460 DLMHHIQQIKKFDEARTRFYACEIVVALQFLHTNNIIYRDLKLD-NVLLDCDGHIKLA 516
>D14815-1|BAA03556.1| 557|Caenorhabditis elegans TPA-1 protein.
Length = 557
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 125 ECLENLNITREFTISREKFYS-----ALRWLTRNNPLYRDVRIDENVQISEQDLIRLS 177
+ + ++ ++F +R +FY+ AL++L NN +YRD+++D NV + I+L+
Sbjct: 313 DLMHHIQQIKKFDEARTRFYACEIVVALQFLHTNNIIYRDLKLD-NVLLDCDGHIKLA 369
>AF078781-3|AAC26917.1| 567|Caenorhabditis elegans Tpa
(tetradecanoyl phorbol acetate)resistant protein 1,
isoform b protein.
Length = 567
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 125 ECLENLNITREFTISREKFYS-----ALRWLTRNNPLYRDVRIDENVQISEQDLIRLS 177
+ + ++ ++F +R +FY+ AL++L NN +YRD+++D NV + I+L+
Sbjct: 323 DLMHHIQQIKKFDEARTRFYACEIVVALQFLHTNNIIYRDLKLD-NVLLDCDGHIKLA 379
>AF078781-2|AAC26916.1| 704|Caenorhabditis elegans Tpa
(tetradecanoyl phorbol acetate)resistant protein 1,
isoform a protein.
Length = 704
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 125 ECLENLNITREFTISREKFYS-----ALRWLTRNNPLYRDVRIDENVQISEQDLIRLS 177
+ + ++ ++F +R +FY+ AL++L NN +YRD+++D NV + I+L+
Sbjct: 460 DLMHHIQQIKKFDEARTRFYACEIVVALQFLHTNNIIYRDLKLD-NVLLDCDGHIKLA 516
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 126 CLENLNITREFTISREKFYSALRWLTRNN---PLYRDVRIDENVQISEQDLIRLSVPDI 181
C+ N + T+E + RE +++ WL N P R V+ D+ +QI+ D + +++ ++
Sbjct: 518 CVSNNHCTQEESCEREVPHTSRGWLDFQNSKCPRIRSVKPDQ-IQINTADYLNVTIENL 575
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
protein.
Length = 1951
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 126 CLENLNITREFTISREKFYSALRWLTRNN---PLYRDVRIDENVQISEQDLIRLSVPDI 181
C+ N + T+E + RE +++ WL N P R V+ D+ +QI+ D + +++ ++
Sbjct: 524 CVSNNHCTQEESCEREVPHTSRGWLDFQNSKCPRIRSVKPDQ-IQINTADYLNVTIENL 581
>U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 2 protein.
Length = 465
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 54 LDPGSIPDEIQALTQAEQRLL 74
LDPG+I ++QA QAE +LL
Sbjct: 6 LDPGNIESDLQAGAQAEYKLL 26
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,509,560
Number of Sequences: 27539
Number of extensions: 311611
Number of successful extensions: 747
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 730
Number of HSP's gapped (non-prelim): 30
length of query: 305
length of database: 12,573,161
effective HSP length: 81
effective length of query: 224
effective length of database: 10,342,502
effective search space: 2316720448
effective search space used: 2316720448
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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