GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000057-TA|BGIBMGA000057-PA|IPR007087|Zinc finger,
C2H2-type
         (160 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071519-1|AAL49141.1|  151|Drosophila melanogaster RE57104p pro...   182   2e-46
AY061563-1|AAL29111.1|  151|Drosophila melanogaster LP11520p pro...   182   2e-46
AE014297-3950|AAF56592.1|  151|Drosophila melanogaster CG5447-PA...   182   2e-46
AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-P...    31   0.74 
AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA...    30   1.3  
AE014297-4112|AAN14110.1|  168|Drosophila melanogaster CG5938-PD...    30   1.3  
AE014297-4111|AAF56693.1|  168|Drosophila melanogaster CG5938-PC...    30   1.3  
AE014297-4110|AAN14109.1|  168|Drosophila melanogaster CG5938-PB...    30   1.3  
AE014297-4109|AAN14108.1|  168|Drosophila melanogaster CG5938-PA...    30   1.3  
AY071441-1|AAL49063.1|  151|Drosophila melanogaster RE52596p pro...    27   9.1  
AE014134-841|AAF52201.2|  151|Drosophila melanogaster CG31917-PA...    27   9.1  

>AY071519-1|AAL49141.1|  151|Drosophila melanogaster RE57104p
           protein.
          Length = 151

 Score =  182 bits (444), Expect = 2e-46
 Identities = 79/121 (65%), Positives = 95/121 (78%)

Query: 25  KIFIQRDYSEGTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCL 84
           K+FIQRDYSEGT+VKF TR P ELE  I+R  FE TI RLNE +  AE   C TYCEGC+
Sbjct: 28  KVFIQRDYSEGTSVKFHTRLPAELEGMIERHVFEATINRLNEFYAEAEEGSCGTYCEGCI 87

Query: 85  ACLTAYFIYICTETHYEKHLRKVSKFIATQNERVYNPRGVHITDPILRGLRVIEITMIDV 144
            C+TAY IY+C+ETHYEK LRK+SKF+A+QNER+YN +G+ + DP  RGLRVIEIT+ D 
Sbjct: 88  GCITAYLIYMCSETHYEKTLRKISKFVASQNERIYNTKGLQLIDPTYRGLRVIEITIFDR 147

Query: 145 P 145
           P
Sbjct: 148 P 148


>AY061563-1|AAL29111.1|  151|Drosophila melanogaster LP11520p
           protein.
          Length = 151

 Score =  182 bits (444), Expect = 2e-46
 Identities = 79/121 (65%), Positives = 95/121 (78%)

Query: 25  KIFIQRDYSEGTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCL 84
           K+FIQRDYSEGT+VKF TR P ELE  I+R  FE TI RLNE +  AE   C TYCEGC+
Sbjct: 28  KVFIQRDYSEGTSVKFHTRLPAELEGMIERHVFEATINRLNEFYAEAEEGSCGTYCEGCI 87

Query: 85  ACLTAYFIYICTETHYEKHLRKVSKFIATQNERVYNPRGVHITDPILRGLRVIEITMIDV 144
            C+TAY IY+C+ETHYEK LRK+SKF+A+QNER+YN +G+ + DP  RGLRVIEIT+ D 
Sbjct: 88  GCITAYLIYMCSETHYEKTLRKISKFVASQNERIYNTKGLQLIDPTYRGLRVIEITIFDR 147

Query: 145 P 145
           P
Sbjct: 148 P 148


>AE014297-3950|AAF56592.1|  151|Drosophila melanogaster CG5447-PA
           protein.
          Length = 151

 Score =  182 bits (444), Expect = 2e-46
 Identities = 79/121 (65%), Positives = 95/121 (78%)

Query: 25  KIFIQRDYSEGTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCL 84
           K+FIQRDYSEGT+VKF TR P ELE  I+R  FE TI RLNE +  AE   C TYCEGC+
Sbjct: 28  KVFIQRDYSEGTSVKFHTRLPAELEGMIERHVFEATINRLNEFYAEAEEGSCGTYCEGCI 87

Query: 85  ACLTAYFIYICTETHYEKHLRKVSKFIATQNERVYNPRGVHITDPILRGLRVIEITMIDV 144
            C+TAY IY+C+ETHYEK LRK+SKF+A+QNER+YN +G+ + DP  RGLRVIEIT+ D 
Sbjct: 88  GCITAYLIYMCSETHYEKTLRKISKFVASQNERIYNTKGLQLIDPTYRGLRVIEITIFDR 147

Query: 145 P 145
           P
Sbjct: 148 P 148


>AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-PB,
            isoform B protein.
          Length = 2520

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 4/118 (3%)

Query: 25   KIFIQRDYSEGTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEM-AETADCSTYCEGC 83
            KI  QR   EG   K + +        + R   +   +      E+ A TA    Y   C
Sbjct: 1805 KIKDQRLEMEGKLEKMKNKMRSLYTAEVTRMKEKQERDAAKSASELEALTAQVDRYAR-C 1863

Query: 84   LACLTAYFIYICTETHYEKHLRKVSKFIATQNERVYNPRGVH-ITDPILRGLRVIEIT 140
            L       IY+     YE+H RK+S  I   NE++   +  H I    LR L++  I+
Sbjct: 1864 LRSYVINSIYL-QNAKYEEHTRKLSNQIVRLNEKILEQQKQHAIISTNLRHLQMQPIS 1920


>AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA
           protein.
          Length = 1384

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 43  RFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYI---CTETH 99
           +F PE+     + T  HT+E L +     +T D  + CE  L+ +TA  + +   C +T 
Sbjct: 328 QFKPEVLANA-QTTVLHTLELLKDTLYGFKTEDIRSVCEHLLSIMTAANVLVRTNCFQTL 386

Query: 100 YEKHLRK 106
           Y   L+K
Sbjct: 387 YSLFLKK 393


>AE014297-4112|AAN14110.1|  168|Drosophila melanogaster CG5938-PD,
           isoform D protein.
          Length = 168

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 35  GTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYI 94
           G + +F   FP  L  R+  + F+ T+ R+N   + +   +      GC+ C       +
Sbjct: 45  GLSNRFNAEFPCGLLSRVAPEEFKATVGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSL 104

Query: 95  CTETHYEKHLR-KVSKFIATQNERVYNPRGVH 125
                  K  +  + K    +N  +Y+  G+H
Sbjct: 105 WPVICLSKRTQLTLDKLFEWENNHLYHKLGLH 136


>AE014297-4111|AAF56693.1|  168|Drosophila melanogaster CG5938-PC,
           isoform C protein.
          Length = 168

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 35  GTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYI 94
           G + +F   FP  L  R+  + F+ T+ R+N   + +   +      GC+ C       +
Sbjct: 45  GLSNRFNAEFPCGLLSRVAPEEFKATVGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSL 104

Query: 95  CTETHYEKHLR-KVSKFIATQNERVYNPRGVH 125
                  K  +  + K    +N  +Y+  G+H
Sbjct: 105 WPVICLSKRTQLTLDKLFEWENNHLYHKLGLH 136


>AE014297-4110|AAN14109.1|  168|Drosophila melanogaster CG5938-PB,
           isoform B protein.
          Length = 168

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 35  GTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYI 94
           G + +F   FP  L  R+  + F+ T+ R+N   + +   +      GC+ C       +
Sbjct: 45  GLSNRFNAEFPCGLLSRVAPEEFKATVGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSL 104

Query: 95  CTETHYEKHLR-KVSKFIATQNERVYNPRGVH 125
                  K  +  + K    +N  +Y+  G+H
Sbjct: 105 WPVICLSKRTQLTLDKLFEWENNHLYHKLGLH 136


>AE014297-4109|AAN14108.1|  168|Drosophila melanogaster CG5938-PA,
           isoform A protein.
          Length = 168

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 35  GTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYI 94
           G + +F   FP  L  R+  + F+ T+ R+N   + +   +      GC+ C       +
Sbjct: 45  GLSNRFNAEFPCGLLSRVAPEEFKATVGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSL 104

Query: 95  CTETHYEKHLR-KVSKFIATQNERVYNPRGVH 125
                  K  +  + K    +N  +Y+  G+H
Sbjct: 105 WPVICLSKRTQLTLDKLFEWENNHLYHKLGLH 136


>AY071441-1|AAL49063.1|  151|Drosophila melanogaster RE52596p
           protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 29  QRDYSEGTAVKFQTRFPPELEERIDRQ-TFEHTIERLNEHFEMAETADCSTYC-EGCLAC 86
           +R  +E   VK++  F   LEE  D+Q  +E       +       A C  +    C AC
Sbjct: 69  KRKGAEYFLVKYRKNFQQLLEEDKDKQPNYESAAAPAPQKPLRHFCAVCGNFSLYSCTAC 128

Query: 87  LTAYFIYICTETHYEKHLRK 106
            T Y    C +TH +    K
Sbjct: 129 GTRYCCVRCLQTHQDTRCLK 148


>AE014134-841|AAF52201.2|  151|Drosophila melanogaster CG31917-PA
           protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 29  QRDYSEGTAVKFQTRFPPELEERIDRQ-TFEHTIERLNEHFEMAETADCSTYC-EGCLAC 86
           +R  +E   VK++  F   LEE  D+Q  +E       +       A C  +    C AC
Sbjct: 69  KRKGAEYFLVKYRKNFQQLLEEDKDKQPNYESAAAPAPQKPLRHFCAVCGNFSLYSCTAC 128

Query: 87  LTAYFIYICTETHYEKHLRK 106
            T Y    C +TH +    K
Sbjct: 129 GTRYCCVRCLQTHQDTRCLK 148


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,525,839
Number of Sequences: 52641
Number of extensions: 280173
Number of successful extensions: 554
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 551
Number of HSP's gapped (non-prelim): 11
length of query: 160
length of database: 24,830,863
effective HSP length: 79
effective length of query: 81
effective length of database: 20,672,224
effective search space: 1674450144
effective search space used: 1674450144
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)