Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000055-TA|BGIBMGA000055-PA|undefined
(209 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 32 0.071
SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 31 0.093
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 31 0.12
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 28 0.87
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 27 2.0
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 27 2.7
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 26 3.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 3.5
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 3.5
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 26 3.5
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 26 4.6
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 26 4.6
SPBC947.13 |rba50||RNA polymerase II associated protein |Schizos... 25 6.1
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 6.1
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 25 8.1
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 25 8.1
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 25 8.1
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 31.9 bits (69), Expect = 0.071
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 92 DEYIHVTNCTKTAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNEVKAKENSLGNI 146
DE + N +K ++ANPD+D + G + ++ E+ + +K K+ S+ N+
Sbjct: 392 DEVENFYNKSKNSLANPDYDPKIYGLQSVLWYSKLRKLIEMMDNIKNKDRSIFNL 446
>SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.093
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 22 VKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVLNIDSNESTRMKQ 81
+ RT ++F N + N L S +FRT D L S T S DSN +
Sbjct: 7 ITRTQVDDFPTTTNFFLTNILSMSVVFRTVEDPELKSICTTFTSSISAEFDSN-TLVCDL 65
Query: 82 AKTDLHMKE 90
+TDL +E
Sbjct: 66 VETDLFTEE 74
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 31.1 bits (67), Expect = 0.12
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 12 LLSENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVLNI 71
L S S + +E + + YK + ++I +T +Q+LL KQ T S L+
Sbjct: 699 LCSNLLSSSLTAKAISEGVSKGLEYYKTVEQRLAEINKTLGEQLLLRRKQGATCLSKLSS 758
Query: 72 DSNESTRMKQAKTDLHM 88
S+ T + +LH+
Sbjct: 759 SSSSHTSISSNMRNLHI 775
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 28.3 bits (60), Expect = 0.87
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 115 VGAEKFNLSFDGNQIFEVKNEVKAKENSLGNIL-GHLNSG 153
+G+++ S + QI E+ ++ ++KE L N+L HL+SG
Sbjct: 375 IGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSG 414
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 27.1 bits (57), Expect = 2.0
Identities = 8/40 (20%), Positives = 25/40 (62%)
Query: 56 LLSNKQDTTQSSVLNIDSNESTRMKQAKTDLHMKEIDEYI 95
LL+N++ ++ ++++D + +++ D++ K +DE +
Sbjct: 314 LLNNQEIPSEQQIISVDKATESPVQEVAVDVNEKPVDEIV 353
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 26.6 bits (56), Expect = 2.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 6 WAVAVLLL----SENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQ 61
W ++ L L SEN R+ + AE LI + + F Y D +LL +
Sbjct: 114 WVISSLYLLSKKSENEVEQRLLKALAEKTAKLIFEKPTGYIDSCEEFHLYLDVLLLVGDK 173
Query: 62 DTTQSSVLNIDSNESTRMKQAKTDLHMKEID 92
D ++++ D++ R A DL +++++
Sbjct: 174 DRALDALIHQDAD---RFVDADADLLLRKLE 201
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 26.2 bits (55), Expect = 3.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 93 EYIHVTNCTKTAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNE 135
E+I+ N I +P D+Q V A + F NQ+F V E
Sbjct: 329 EHIYEANIFGLYIQSPQLDIQTVAAGGGSRLFWRNQLFSVGPE 371
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.2 bits (55), Expect = 3.5
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 21 RVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVL--NIDSNESTR 78
RV RTN E+ A++ + +PL ++ Y+ I KQ +++L ID R
Sbjct: 2207 RVLRTNKESVMAVLEAFVYDPLINWRLAPAYSPSI--DEKQSNEPNTLLGETIDGLHRKR 2264
Query: 79 MKQAKTDLHMKEIDEYIH 96
+ + L ++ E ++
Sbjct: 2265 LNEEGITLEERQKPEILN 2282
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 26.2 bits (55), Expect = 3.5
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 36 LYKINPLKKSKIFRTYADQILLSNKQDTTQSSVLNIDSN------ESTRMKQAKTDLHMK 89
+Y+++ +K S R Q+LLSN + + I SN + + K + D++ +
Sbjct: 827 IYRLSHIKLSNAHRPLFQQVLLSNFMYSYLDLISRISSNRPMNNVQQSTAKPIRKDINGQ 886
Query: 90 EIDEYIHVTNCTKTAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNEV-KAKENS 142
+ N K + N + D K NL+ G+ I V + K +N+
Sbjct: 887 QRRSEFSAEN-VKNELENLSYQFGD--QRKRNLNRKGSTIHTVSQNIQKVSKNA 937
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 26.2 bits (55), Expect = 3.5
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 24 RTNAENFNALINLYKINPLKKSKI-FRTYADQILLSNKQDTTQSSVLNIDSNESTRMKQA 82
++N N LI K +K KI + Y D++L +N +TT+ +L +S K+
Sbjct: 14 KSNLNFLNELIEEKKRYEDEKRKISHQKYTDKLLEANDNETTKRKLLVKQKRKSN--KEF 71
Query: 83 KTDLHMKEIDE 93
++++ K DE
Sbjct: 72 QSNIIKKRKDE 82
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 16 NASGHRVKRTNAENFNALINLYKINPLK 43
N ++RT+A+NF+ NL KIN ++
Sbjct: 579 NTLDKSLRRTDAKNFDQQWNLQKINTMR 606
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 133 KNEVKAKENSLGNILGHLNSGEIIANPVAAFDVVTQTNDLGGLRNEKDSFKYEDINAKDD 192
+N + +N +G + P A ++ TN G+ SF + D+
Sbjct: 7 RNSIATTDNVIGRNKSRKRPHSL-GGPGALQELKEHTNPAKGILKSYSSFSVDPAFTGDE 65
Query: 193 LGNEVHSYPNSEVI 206
N++H+ N+ VI
Sbjct: 66 DFNDIHTQINNTVI 79
>SPBC947.13 |rba50||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.4 bits (53), Expect = 6.1
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 22 VKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVLNIDS---NESTR 78
VKR+ + + + P ++SK Y +++L NK+ N+D +E R
Sbjct: 26 VKRSVQRHARGFPAVSRTLPKRESKSMSAYKEKMLRKNKESPGLEGKGNLDDQGIDEENR 85
Query: 79 MK-QAKTDLHMKEIDEYIHVT 98
++ + DL ++ E I T
Sbjct: 86 VRLERMNDLEIEGAQEEIRAT 106
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 25.4 bits (53), Expect = 6.1
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 22 VKRTNA-ENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVLNIDSNESTRMK 80
VKR N+ ++F + + + + A + LL+ + D T S + D ES K
Sbjct: 338 VKRHNSSQSFYGNRSTTNFSIINSGLYLKKDAAKNLLAKQFDATYS-YYHKDLEESVHQK 396
Query: 81 QAKTDLHMKEIDEYIHVTNCTKTAIANPDFDVQDVGA 117
++L K +++YI + + +PDF ++ VGA
Sbjct: 397 -LNSNLE-KRVEKYIKHSCSQRNVADHPDFALKVVGA 431
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 14 SENASGHRVKRTNAENFNALINLYKINPLKKSKIFR 49
S ASG VKR+++E+ A N NP+ + + R
Sbjct: 99 SGTASGADVKRSDSESTEATSNERPFNPVSAANLER 134
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 25.0 bits (52), Expect = 8.1
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 65 QSSVLNIDSNESTRMKQAKTDLHMKEIDEYIHVTNCTKTAIANPDFDVQDVGAEKFNLSF 124
Q + LNI S + R+ +A ++ K ++A ++ + K N SF
Sbjct: 180 QKNTLNISSVKQDRITEANPTCEKRKPSRSPSPMLSKKKSVARAS---ENEPSAKQNKSF 236
Query: 125 DGNQIFEVKNEVKAKEN 141
GN + +++ KEN
Sbjct: 237 SGNDSHKSLTDIRDKEN 253
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 46 KIFRTYADQILLSNKQDTTQSSVLNIDSNESTRMKQAKTDLHMKE 90
++ R+ D+ ++ NK+D + S L I + + + K K D E
Sbjct: 930 RVRRSRGDKKVVDNKRDASDSEDLAIKNPMNKKAKVGKVDFRKHE 974
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.131 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 977,948
Number of Sequences: 5004
Number of extensions: 41268
Number of successful extensions: 116
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 105
Number of HSP's gapped (non-prelim): 18
length of query: 209
length of database: 2,362,478
effective HSP length: 70
effective length of query: 139
effective length of database: 2,012,198
effective search space: 279695522
effective search space used: 279695522
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
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